Gene annotation
Transcriptome id Sobic.007G070500.2,Sobic.007G070500.1
Synonym Sb07g005580
Functional annotation OsFBL41 - F-box domain and LRR containing protein, expressed
UniProt A0A1Z5R9I4 , C5YIE2
Pfam PF12937
Panther DB PTHR24006 PTHR24006:SF482
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G05460 : RNI-like superfamily protein
RAP-DB (Rice) LOC_Os08g09450.1 : OsFBL41 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ95482 , PNT66828 , PNT62740 , KQJ95509
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G385000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein kinase, putative, expressed -
2 Sobic.001G489150 - -
3 Sobic.002G019750 - -
4 Sobic.006G199700 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
5 Sobic.001G284400 jmjC domain containing protein, expressed -
6 Sobic.010G266800 DUF803 domain containing, putative, expressed -
7 Sobic.003G043800 BT1 family protein, putative, expressed -
8 Sobic.010G116700 - -
9 Sobic.006G219900 csAtPR5, putative, expressed -
10 Sobic.005G170700 OsFBDUF64 - F-box and DUF domain containing protein -
11 Sobic.001G284425 - -
12 Sobic.004G278700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
13 Sobic.004G098800 - -
14 Sobic.001G057600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
15 Sobic.003G084750 - -
16 Sobic.002G108200 OsFBD16 - F-box and FBD domain containing protein, expressed -
17 Sobic.003G435400 OsDegp14 - Putative Deg protease homologue, expressed -
18 Sobic.004G186300 protein phosphotase protein, putative, expressed -
19 Sobic.006G069200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
20 Sobic.004G178700 protein transport protein Sec61, putative, expressed K10956: protein transport protein SEC61 subunit alpha


Gene co-expression network
sample Sobic007G070500 Sobic007G070500 Sobic003G385000 Sobic003G385000 Sobic007G070500--Sobic003G385000 Sobic001G489150 Sobic001G489150 Sobic007G070500--Sobic001G489150 Sobic002G019750 Sobic002G019750 Sobic007G070500--Sobic002G019750 Sobic006G199700 Sobic006G199700 Sobic007G070500--Sobic006G199700 Sobic001G284400 Sobic001G284400 Sobic007G070500--Sobic001G284400 Sobic010G266800 Sobic010G266800 Sobic007G070500--Sobic010G266800 Sobic003G043800 Sobic003G043800 Sobic007G070500--Sobic003G043800 Sobic010G116700 Sobic010G116700 Sobic007G070500--Sobic010G116700 Sobic006G219900 Sobic006G219900 Sobic007G070500--Sobic006G219900 Sobic010G134700 Sobic010G134700 Sobic003G385000--Sobic010G134700 Sobic004G098800 Sobic004G098800 Sobic003G385000--Sobic004G098800 Sobic001G284425 Sobic001G284425 Sobic003G385000--Sobic001G284425 Sobic008G041450 Sobic008G041450 Sobic003G385000--Sobic008G041450 Sobic002G373600 Sobic002G373600 Sobic003G385000--Sobic002G373600 Sobic003G385000--Sobic001G284400 Sobic003G385000--Sobic007G070500 Sobic003G223800 Sobic003G223800 Sobic003G385000--Sobic003G223800 Sobic004G178700 Sobic004G178700 Sobic003G385000--Sobic004G178700 Sobic001G489150--Sobic007G070500 Sobic004G010800 Sobic004G010800 Sobic001G489150--Sobic004G010800 Sobic001G489150--Sobic002G019750 Sobic008G065400 Sobic008G065400 Sobic001G489150--Sobic008G065400 Sobic003G266700 Sobic003G266700 Sobic001G489150--Sobic003G266700 Sobic003G084750 Sobic003G084750 Sobic001G489150--Sobic003G084750 Sobic004G152601 Sobic004G152601 Sobic001G489150--Sobic004G152601 Sobic003G366850 Sobic003G366850 Sobic001G489150--Sobic003G366850 Sobic009G159300 Sobic009G159300 Sobic001G489150--Sobic009G159300 Sobic002G019500 Sobic002G019500 Sobic002G019750--Sobic002G019500 Sobic002G019750--Sobic007G070500 Sobic002G019750--Sobic001G489150 Sobic002G019750--Sobic006G199700 Sobic006G223800 Sobic006G223800 Sobic002G019750--Sobic006G223800 Sobic008G155600 Sobic008G155600 Sobic002G019750--Sobic008G155600 Sobic005G170700 Sobic005G170700 Sobic002G019750--Sobic005G170700 Sobic002G106000 Sobic002G106000 Sobic002G019750--Sobic002G106000 Sobic005G064700 Sobic005G064700 Sobic002G019750--Sobic005G064700 Sobic003G435400 Sobic003G435400 Sobic006G199700--Sobic003G435400 Sobic006G199700--Sobic002G373600 Sobic006G199700--Sobic003G385000 Sobic006G199700--Sobic001G284425 Sobic006G069200 Sobic006G069200 Sobic006G199700--Sobic006G069200 Sobic006G199700--Sobic003G223800 Sobic008G010900 Sobic008G010900 Sobic006G199700--Sobic008G010900 Sobic006G199700--Sobic004G098800 Sobic006G199700--Sobic002G019750 Sobic001G284400--Sobic002G373600 Sobic001G284400--Sobic001G284425 Sobic008G129000 Sobic008G129000 Sobic001G284400--Sobic008G129000 Sobic010G076700 Sobic010G076700 Sobic001G284400--Sobic010G076700 Sobic001G284400--Sobic003G385000 Sobic010G252900 Sobic010G252900 Sobic001G284400--Sobic010G252900 Sobic005G044300 Sobic005G044300 Sobic001G284400--Sobic005G044300 Sobic006G263100 Sobic006G263100 Sobic001G284400--Sobic006G263100 Sobic001G409900 Sobic001G409900 Sobic001G284400--Sobic001G409900 Sobic010G266800--Sobic001G284400 Sobic010G266800--Sobic007G070500 Sobic010G266800--Sobic003G385000 Sobic001G057600 Sobic001G057600 Sobic010G266800--Sobic001G057600 Sobic010G266800--Sobic003G043800 Sobic010G266800--Sobic008G129000 Sobic008G014300 Sobic008G014300 Sobic010G266800--Sobic008G014300 Sobic010G266800--Sobic001G284425 Sobic003G346100 Sobic003G346100 Sobic010G266800--Sobic003G346100 Sobic006G217300 Sobic006G217300 Sobic003G043800--Sobic006G217300 Sobic001G122500 Sobic001G122500 Sobic003G043800--Sobic001G122500 Sobic010G026300 Sobic010G026300 Sobic003G043800--Sobic010G026300 Sobic004G124500 Sobic004G124500 Sobic003G043800--Sobic004G124500 Sobic004G207900 Sobic004G207900 Sobic003G043800--Sobic004G207900 Sobic001G378200 Sobic001G378200 Sobic003G043800--Sobic001G378200 Sobic006G207900 Sobic006G207900 Sobic003G043800--Sobic006G207900 Sobic006G055400 Sobic006G055400 Sobic003G043800--Sobic006G055400 Sobic005G207400 Sobic005G207400 Sobic003G043800--Sobic005G207400 Sobic006G239700 Sobic006G239700 Sobic010G116700--Sobic006G239700 Sobic005G169500 Sobic005G169500 Sobic010G116700--Sobic005G169500 Sobic010G116700--Sobic006G219900 Sobic001G245400 Sobic001G245400 Sobic010G116700--Sobic001G245400 Sobic010G116700--Sobic007G070500 Sobic010G116700--Sobic004G178700 Sobic001G414100 Sobic001G414100 Sobic010G116700--Sobic001G414100 Sobic005G171700 Sobic005G171700 Sobic010G116700--Sobic005G171700 Sobic001G287000 Sobic001G287000 Sobic010G116700--Sobic001G287000 Sobic004G186300 Sobic004G186300 Sobic006G219900--Sobic004G186300 Sobic001G490950 Sobic001G490950 Sobic006G219900--Sobic001G490950 Sobic004G032600 Sobic004G032600 Sobic006G219900--Sobic004G032600 Sobic006G219900--Sobic001G414100 Sobic002G160100 Sobic002G160100 Sobic006G219900--Sobic002G160100 Sobic003G117800 Sobic003G117800 Sobic006G219900--Sobic003G117800 Sobic003G392275 Sobic003G392275 Sobic006G219900--Sobic003G392275 Sobic006G219900--Sobic004G098800 Sobic002G102300 Sobic002G102300 Sobic006G219900--Sobic002G102300
Octagon: transcription factors


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