Gene annotation
Transcriptome id Sobic.006G219900.1
Synonym Sb06g028940
Functional annotation csAtPR5, putative, expressed
UniProt C5YG58
Pfam -
Panther DB PTHR33065 PTHR33065:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g34602.1 : csAtPR5, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS1D02G108400 , TraesCS1B02G124000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G186300 protein phosphotase protein, putative, expressed -
2 Sobic.001G490950 - -
3 Sobic.004G032600 - -
4 Sobic.001G414100 expressed protein -
5 Sobic.002G160100 expressed protein K14001: SIL1, nucleotide exchange factor SIL1
6 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
7 Sobic.003G392275 - -
8 Sobic.004G098800 - -
9 Sobic.002G102300 - -
10 Sobic.001G179800 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
11 Sobic.002G007800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
12 Sobic.006G222500 expressed protein -
13 Sobic.001G057400 expressed protein -
14 Sobic.002G368100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@COBRA, putative, expressed -
15 Sobic.002G158300 ankyrin, putative, expressed -
16 Sobic.004G278700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
17 Sobic.003G270100 dehydrin family protein, expressed -
18 Sobic.003G141600 - -
19 Sobic.008G155400 ankyrin, putative, expressed -
20 Sobic.003G035601 - -


Gene co-expression network
sample Sobic006G219900 Sobic006G219900 Sobic004G186300 Sobic004G186300 Sobic006G219900--Sobic004G186300 Sobic001G490950 Sobic001G490950 Sobic006G219900--Sobic001G490950 Sobic004G032600 Sobic004G032600 Sobic006G219900--Sobic004G032600 Sobic001G414100 Sobic001G414100 Sobic006G219900--Sobic001G414100 Sobic002G160100 Sobic002G160100 Sobic006G219900--Sobic002G160100 Sobic003G117800 Sobic003G117800 Sobic006G219900--Sobic003G117800 Sobic003G392275 Sobic003G392275 Sobic006G219900--Sobic003G392275 Sobic004G098800 Sobic004G098800 Sobic006G219900--Sobic004G098800 Sobic002G102300 Sobic002G102300 Sobic006G219900--Sobic002G102300 Sobic006G222500 Sobic006G222500 Sobic004G186300--Sobic006G222500 Sobic003G270100 Sobic003G270100 Sobic004G186300--Sobic003G270100 Sobic004G186300--Sobic006G219900 Sobic003G308300 Sobic003G308300 Sobic004G186300--Sobic003G308300 Sobic007G148400 Sobic007G148400 Sobic004G186300--Sobic007G148400 Sobic010G253400 Sobic010G253400 Sobic004G186300--Sobic010G253400 Sobic007G218600 Sobic007G218600 Sobic004G186300--Sobic007G218600 Sobic001G408400 Sobic001G408400 Sobic004G186300--Sobic001G408400 Sobic003G346500 Sobic003G346500 Sobic004G186300--Sobic003G346500 Sobic001G490950--Sobic002G102300 Sobic010G006800 Sobic010G006800 Sobic001G490950--Sobic010G006800 Sobic004G074900 Sobic004G074900 Sobic001G490950--Sobic004G074900 Sobic007G101600 Sobic007G101600 Sobic001G490950--Sobic007G101600 Sobic001G490950--Sobic003G392275 Sobic003G238250 Sobic003G238250 Sobic001G490950--Sobic003G238250 Sobic001G226900 Sobic001G226900 Sobic001G490950--Sobic001G226900 Sobic002G368100 Sobic002G368100 Sobic001G490950--Sobic002G368100 Sobic007G138000 Sobic007G138000 Sobic001G490950--Sobic007G138000 Sobic004G032600--Sobic001G490950 Sobic004G032600--Sobic004G098800 Sobic004G032600--Sobic001G226900 Sobic004G032600--Sobic003G392275 Sobic004G032600--Sobic002G102300 Sobic004G032600--Sobic010G006800 Sobic004G032600--Sobic006G219900 Sobic004G032600--Sobic002G368100 Sobic003G141600 Sobic003G141600 Sobic004G032600--Sobic003G141600 Sobic001G414100--Sobic003G392275 Sobic003G342500 Sobic003G342500 Sobic001G414100--Sobic003G342500 Sobic001G414100--Sobic004G098800 Sobic001G414100--Sobic002G102300 Sobic001G414100--Sobic006G219900 Sobic001G414100--Sobic003G141600 Sobic001G414100--Sobic003G117800 Sobic003G435400 Sobic003G435400 Sobic001G414100--Sobic003G435400 Sobic002G106200 Sobic002G106200 Sobic001G414100--Sobic002G106200 Sobic002G007800 Sobic002G007800 Sobic002G160100--Sobic002G007800 Sobic010G095400 Sobic010G095400 Sobic002G160100--Sobic010G095400 Sobic002G160100--Sobic001G490950 Sobic002G160100--Sobic004G032600 Sobic002G160100--Sobic006G219900 Sobic002G160100--Sobic002G368100 Sobic001G179800 Sobic001G179800 Sobic002G160100--Sobic001G179800 Sobic002G160100--Sobic003G392275 Sobic002G160100--Sobic002G102300 Sobic001G424800 Sobic001G424800 Sobic003G117800--Sobic001G424800 Sobic003G385300 Sobic003G385300 Sobic003G117800--Sobic003G385300 Sobic003G394500 Sobic003G394500 Sobic003G117800--Sobic003G394500 Sobic001G057400 Sobic001G057400 Sobic003G117800--Sobic001G057400 Sobic008G152700 Sobic008G152700 Sobic003G117800--Sobic008G152700 Sobic001G149000 Sobic001G149000 Sobic003G117800--Sobic001G149000 Sobic001G356200 Sobic001G356200 Sobic003G117800--Sobic001G356200 Sobic001G385000 Sobic001G385000 Sobic003G117800--Sobic001G385000 Sobic009G046900 Sobic009G046900 Sobic003G117800--Sobic009G046900 Sobic003G392275--Sobic002G102300 Sobic003G392275--Sobic001G226900 Sobic003G392275--Sobic001G490950 Sobic003G392275--Sobic010G006800 Sobic003G392275--Sobic007G101600 Sobic003G392275--Sobic004G074900 Sobic003G392275--Sobic003G238250 Sobic003G392275--Sobic004G098800 Sobic008G057600 Sobic008G057600 Sobic003G392275--Sobic008G057600 Sobic010G134700 Sobic010G134700 Sobic004G098800--Sobic010G134700 Sobic008G041450 Sobic008G041450 Sobic004G098800--Sobic008G041450 Sobic004G098800--Sobic003G392275 Sobic003G385000 Sobic003G385000 Sobic004G098800--Sobic003G385000 Sobic004G098800--Sobic010G006800 Sobic004G098800--Sobic003G141600 Sobic004G098800--Sobic001G490950 Sobic004G098800--Sobic002G102300 Sobic004G098800--Sobic004G032600 Sobic002G102300--Sobic010G006800 Sobic002G102300--Sobic007G101600 Sobic002G102300--Sobic003G238250 Sobic002G102300--Sobic001G490950 Sobic002G102300--Sobic004G074900 Sobic002G102300--Sobic003G392275 Sobic004G140400 Sobic004G140400 Sobic002G102300--Sobic004G140400 Sobic001G286900 Sobic001G286900 Sobic002G102300--Sobic001G286900 Sobic002G102300--Sobic007G138000
Octagon: transcription factors


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