Gene annotation
Transcriptome id Sobic.002G160100.1
Synonym Sb02g020380
Functional annotation expressed protein
UniProt C5X8X4
Pfam PF08609
Panther DB PTHR19316 PTHR19316:SF6
NCBI CDD KOG2160; Armadillo/beta-catenin-like repeat-containing protein
KEGG Orthology K14001; SIL1, nucleotide exchange factor SIL1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51980 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os09g33780.1 : expressed protein
MaizeGDB (Corn) Zm00025a047622
Brachypodium KQJ90979
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G007800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
2 Sobic.010G095400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@urea active transporter, putative, expressed -
3 Sobic.001G490950 - -
4 Sobic.004G032600 - -
5 Sobic.006G219900 csAtPR5, putative, expressed -
6 Sobic.002G368100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@COBRA, putative, expressed -
7 Sobic.001G179800 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
8 Sobic.003G392275 - -
9 Sobic.002G102300 - -
10 Sobic.004G098800 - -
11 Sobic.004G074900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
12 Sobic.002G139600 2-phosphoglycerate kinase-related, putative, expressed -
13 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
14 Sobic.008G141600 expressed protein -
15 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
16 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase
17 Sobic.010G006800 auxin-induced protein 5NG4, putative, expressed -
18 Sobic.004G176200 SacI homology domain containing protein, expressed -
19 Sobic.001G226900 zinc finger family protein, putative, expressed -
20 Sobic.003G141600 - -


Gene co-expression network
sample Sobic002G160100 Sobic002G160100 Sobic002G007800 Sobic002G007800 Sobic002G160100--Sobic002G007800 Sobic010G095400 Sobic010G095400 Sobic002G160100--Sobic010G095400 Sobic001G490950 Sobic001G490950 Sobic002G160100--Sobic001G490950 Sobic004G032600 Sobic004G032600 Sobic002G160100--Sobic004G032600 Sobic006G219900 Sobic006G219900 Sobic002G160100--Sobic006G219900 Sobic002G368100 Sobic002G368100 Sobic002G160100--Sobic002G368100 Sobic001G179800 Sobic001G179800 Sobic002G160100--Sobic001G179800 Sobic003G392275 Sobic003G392275 Sobic002G160100--Sobic003G392275 Sobic002G102300 Sobic002G102300 Sobic002G160100--Sobic002G102300 Sobic002G304700 Sobic002G304700 Sobic002G007800--Sobic002G304700 Sobic009G106700 Sobic009G106700 Sobic002G007800--Sobic009G106700 Sobic010G160300 Sobic010G160300 Sobic002G007800--Sobic010G160300 Sobic002G007800--Sobic010G095400 Sobic006G166400 Sobic006G166400 Sobic002G007800--Sobic006G166400 Sobic001G501900 Sobic001G501900 Sobic002G007800--Sobic001G501900 Sobic002G057400 Sobic002G057400 Sobic002G007800--Sobic002G057400 Sobic003G211800 Sobic003G211800 Sobic002G007800--Sobic003G211800 Sobic003G385300 Sobic003G385300 Sobic002G007800--Sobic003G385300 Sobic004G176200 Sobic004G176200 Sobic010G095400--Sobic004G176200 Sobic010G095400--Sobic002G007800 Sobic010G095400--Sobic002G368100 Sobic004G074900 Sobic004G074900 Sobic010G095400--Sobic004G074900 Sobic003G238250 Sobic003G238250 Sobic010G095400--Sobic003G238250 Sobic007G101600 Sobic007G101600 Sobic010G095400--Sobic007G101600 Sobic008G141600 Sobic008G141600 Sobic010G095400--Sobic008G141600 Sobic010G006800 Sobic010G006800 Sobic010G095400--Sobic010G006800 Sobic002G103800 Sobic002G103800 Sobic010G095400--Sobic002G103800 Sobic001G490950--Sobic002G102300 Sobic001G490950--Sobic010G006800 Sobic001G490950--Sobic004G074900 Sobic001G490950--Sobic007G101600 Sobic001G490950--Sobic003G392275 Sobic001G490950--Sobic003G238250 Sobic001G226900 Sobic001G226900 Sobic001G490950--Sobic001G226900 Sobic001G490950--Sobic002G368100 Sobic007G138000 Sobic007G138000 Sobic001G490950--Sobic007G138000 Sobic004G032600--Sobic001G490950 Sobic004G098800 Sobic004G098800 Sobic004G032600--Sobic004G098800 Sobic004G032600--Sobic001G226900 Sobic004G032600--Sobic003G392275 Sobic004G032600--Sobic002G102300 Sobic004G032600--Sobic010G006800 Sobic004G032600--Sobic006G219900 Sobic004G032600--Sobic002G368100 Sobic003G141600 Sobic003G141600 Sobic004G032600--Sobic003G141600 Sobic004G186300 Sobic004G186300 Sobic006G219900--Sobic004G186300 Sobic006G219900--Sobic001G490950 Sobic006G219900--Sobic004G032600 Sobic001G414100 Sobic001G414100 Sobic006G219900--Sobic001G414100 Sobic006G219900--Sobic002G160100 Sobic003G117800 Sobic003G117800 Sobic006G219900--Sobic003G117800 Sobic006G219900--Sobic003G392275 Sobic006G219900--Sobic004G098800 Sobic006G219900--Sobic002G102300 Sobic002G368100--Sobic004G074900 Sobic002G368100--Sobic001G490950 Sobic002G368100--Sobic008G141600 Sobic002G368100--Sobic001G226900 Sobic002G368100--Sobic010G006800 Sobic010G134700 Sobic010G134700 Sobic002G368100--Sobic010G134700 Sobic002G368100--Sobic002G102300 Sobic002G368100--Sobic003G238250 Sobic002G368100--Sobic007G101600 Sobic001G179800--Sobic002G007800 Sobic001G179800--Sobic002G057400 Sobic001G179800--Sobic002G160100 Sobic001G179800--Sobic006G219900 Sobic001G179800--Sobic001G501900 Sobic001G179800--Sobic002G304700 Sobic001G179800--Sobic010G160300 Sobic002G139600 Sobic002G139600 Sobic001G179800--Sobic002G139600 Sobic001G179800--Sobic003G117800 Sobic003G392275--Sobic002G102300 Sobic003G392275--Sobic001G226900 Sobic003G392275--Sobic001G490950 Sobic003G392275--Sobic010G006800 Sobic003G392275--Sobic007G101600 Sobic003G392275--Sobic004G074900 Sobic003G392275--Sobic003G238250 Sobic003G392275--Sobic004G098800 Sobic008G057600 Sobic008G057600 Sobic003G392275--Sobic008G057600 Sobic002G102300--Sobic010G006800 Sobic002G102300--Sobic007G101600 Sobic002G102300--Sobic003G238250 Sobic002G102300--Sobic001G490950 Sobic002G102300--Sobic004G074900 Sobic002G102300--Sobic003G392275 Sobic004G140400 Sobic004G140400 Sobic002G102300--Sobic004G140400 Sobic001G286900 Sobic001G286900 Sobic002G102300--Sobic001G286900 Sobic002G102300--Sobic007G138000
Octagon: transcription factors


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