Gene annotation
Transcriptome id Sobic.010G095400.2,Sobic.010G095400.1
Synonym ATDUR3, DUR3, Sb10g008320
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
urea active transporter, putative, expressed
UniProt C5Z7F1 , A0A1W0VS88
Pfam PF00474
Panther DB PTHR11819 PTHR11819:SF94
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G45380 : solute:sodium symporters;urea transmembrane transporters
RAP-DB (Rice) LOC_Os10g42960.1 : urea active transporter, putative, expressed
MaizeGDB (Corn) Zm00025a042616
Brachypodium KQJ96223
Barley HORVU1Hr1G051450.10 , HORVU1Hr1G051450.8 , HORVU1Hr1G051450.6 , HORVU1Hr1G051450.7 , HORVU1Hr1G051450.4 , HORVU1Hr1G051450.5 , HORVU1Hr1G051450.2 , HORVU1Hr1G051450.1 , HORVU1Hr1G051450.9 , HORVU1Hr1G051450.3
Wheat TraesCS1D02G201800 , TraesCS1A02G198300 , TraesCS1B02G213100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G176200 SacI homology domain containing protein, expressed -
2 Sobic.002G007800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
3 Sobic.002G368100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@COBRA, putative, expressed -
4 Sobic.004G074900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
5 Sobic.003G238250 - -
6 Sobic.007G101600 - -
7 Sobic.008G141600 expressed protein -
8 Sobic.010G006800 auxin-induced protein 5NG4, putative, expressed -
9 Sobic.002G103800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
10 Sobic.001G490950 - -
11 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase
12 Sobic.002G102300 - -
13 Sobic.003G284600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX23 - F-box domain containing protein, expressed -
14 Sobic.005G225500 expressed protein -
15 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
16 Sobic.007G004300 phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed -
17 Sobic.008G054200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@csAtPR5, putative, expressed -
18 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
19 Sobic.007G138000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
20 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family


Gene co-expression network
sample Sobic010G095400 Sobic010G095400 Sobic004G176200 Sobic004G176200 Sobic010G095400--Sobic004G176200 Sobic002G007800 Sobic002G007800 Sobic010G095400--Sobic002G007800 Sobic002G368100 Sobic002G368100 Sobic010G095400--Sobic002G368100 Sobic004G074900 Sobic004G074900 Sobic010G095400--Sobic004G074900 Sobic003G238250 Sobic003G238250 Sobic010G095400--Sobic003G238250 Sobic007G101600 Sobic007G101600 Sobic010G095400--Sobic007G101600 Sobic008G141600 Sobic008G141600 Sobic010G095400--Sobic008G141600 Sobic010G006800 Sobic010G006800 Sobic010G095400--Sobic010G006800 Sobic002G103800 Sobic002G103800 Sobic010G095400--Sobic002G103800 Sobic003G385300 Sobic003G385300 Sobic004G176200--Sobic003G385300 Sobic004G176200--Sobic002G103800 Sobic007G004300 Sobic007G004300 Sobic004G176200--Sobic007G004300 Sobic004G077300 Sobic004G077300 Sobic004G176200--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic004G176200--Sobic004G064200 Sobic001G257800 Sobic001G257800 Sobic004G176200--Sobic001G257800 Sobic002G180800 Sobic002G180800 Sobic004G176200--Sobic002G180800 Sobic001G356200 Sobic001G356200 Sobic004G176200--Sobic001G356200 Sobic006G080700 Sobic006G080700 Sobic004G176200--Sobic006G080700 Sobic002G304700 Sobic002G304700 Sobic002G007800--Sobic002G304700 Sobic009G106700 Sobic009G106700 Sobic002G007800--Sobic009G106700 Sobic010G160300 Sobic010G160300 Sobic002G007800--Sobic010G160300 Sobic002G007800--Sobic010G095400 Sobic006G166400 Sobic006G166400 Sobic002G007800--Sobic006G166400 Sobic001G501900 Sobic001G501900 Sobic002G007800--Sobic001G501900 Sobic002G057400 Sobic002G057400 Sobic002G007800--Sobic002G057400 Sobic003G211800 Sobic003G211800 Sobic002G007800--Sobic003G211800 Sobic002G007800--Sobic003G385300 Sobic002G368100--Sobic004G074900 Sobic001G490950 Sobic001G490950 Sobic002G368100--Sobic001G490950 Sobic002G368100--Sobic008G141600 Sobic001G226900 Sobic001G226900 Sobic002G368100--Sobic001G226900 Sobic002G368100--Sobic010G006800 Sobic010G134700 Sobic010G134700 Sobic002G368100--Sobic010G134700 Sobic002G102300 Sobic002G102300 Sobic002G368100--Sobic002G102300 Sobic002G368100--Sobic003G238250 Sobic002G368100--Sobic007G101600 Sobic004G074900--Sobic007G101600 Sobic004G074900--Sobic008G141600 Sobic004G074900--Sobic003G238250 Sobic004G074900--Sobic002G102300 Sobic001G286900 Sobic001G286900 Sobic004G074900--Sobic001G286900 Sobic006G267100 Sobic006G267100 Sobic004G074900--Sobic006G267100 Sobic004G038500 Sobic004G038500 Sobic004G074900--Sobic004G038500 Sobic007G138000 Sobic007G138000 Sobic004G074900--Sobic007G138000 Sobic004G074900--Sobic010G006800 Sobic003G238250--Sobic007G101600 Sobic003G238250--Sobic010G006800 Sobic003G238250--Sobic001G286900 Sobic003G238250--Sobic002G102300 Sobic003G238250--Sobic004G074900 Sobic003G238250--Sobic007G138000 Sobic002G257001 Sobic002G257001 Sobic003G238250--Sobic002G257001 Sobic005G135100 Sobic005G135100 Sobic003G238250--Sobic005G135100 Sobic005G225500 Sobic005G225500 Sobic003G238250--Sobic005G225500 Sobic007G101600--Sobic001G286900 Sobic007G101600--Sobic007G138000 Sobic007G101600--Sobic005G135100 Sobic007G101600--Sobic003G238250 Sobic007G101600--Sobic002G257001 Sobic004G042501 Sobic004G042501 Sobic007G101600--Sobic004G042501 Sobic007G101600--Sobic010G006800 Sobic002G106600 Sobic002G106600 Sobic007G101600--Sobic002G106600 Sobic007G070900 Sobic007G070900 Sobic007G101600--Sobic007G070900 Sobic008G141600--Sobic004G074900 Sobic008G141600--Sobic003G238250 Sobic008G141600--Sobic002G368100 Sobic008G141600--Sobic007G101600 Sobic008G141600--Sobic010G006800 Sobic008G141600--Sobic001G490950 Sobic008G141600--Sobic002G102300 Sobic008G141600--Sobic006G267100 Sobic008G141600--Sobic007G138000 Sobic010G006800--Sobic003G238250 Sobic010G006800--Sobic007G101600 Sobic010G006800--Sobic002G102300 Sobic010G006800--Sobic001G490950 Sobic010G006800--Sobic004G074900 Sobic010G006800--Sobic007G138000 Sobic010G006800--Sobic001G286900 Sobic008G057600 Sobic008G057600 Sobic010G006800--Sobic008G057600 Sobic003G392275 Sobic003G392275 Sobic010G006800--Sobic003G392275 Sobic010G114200 Sobic010G114200 Sobic002G103800--Sobic010G114200 Sobic006G150300 Sobic006G150300 Sobic002G103800--Sobic006G150300 Sobic001G241401 Sobic001G241401 Sobic002G103800--Sobic001G241401 Sobic007G112500 Sobic007G112500 Sobic002G103800--Sobic007G112500 Sobic002G103800--Sobic005G135100 Sobic002G103800--Sobic004G064200 Sobic007G176900 Sobic007G176900 Sobic002G103800--Sobic007G176900 Sobic002G103800--Sobic004G042501 Sobic006G097400 Sobic006G097400 Sobic002G103800--Sobic006G097400
Octagon: transcription factors


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