Gene annotation
Transcriptome id Sobic.003G284600.1
Synonym Sb03g033585
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsFBX23 - F-box domain containing protein, expressed
UniProt A0A1B6Q5V9
Pfam PF07723 PF00646 PF08387
Panther DB PTHR32212 PTHR32212:SF72
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G00320 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os01g52980.1 : OsFBX23 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK09582
Barley -
Wheat TraesCS3A02G282200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G004300 phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed -
2 Sobic.010G095400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@urea active transporter, putative, expressed -
3 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
4 Sobic.004G176200 SacI homology domain containing protein, expressed -
5 Sobic.001G408400 phosphatase, putative, expressed K07252: dolichyldiphosphatase
6 Sobic.008G054200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@csAtPR5, putative, expressed -
7 Sobic.004G074600 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase
9 Sobic.002G103800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
10 Sobic.002G034750 - -
11 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
12 Sobic.010G253400 AIG2-like family domain containing protein, expressed -
13 Sobic.010G225201 - -
14 Sobic.005G225100 expressed protein -
15 Sobic.001G490950 - -
16 Sobic.007G138100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
17 Sobic.002G368100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@COBRA, putative, expressed -
18 Sobic.005G145201 - K06630: 14-3-3 protein epsilon
19 Sobic.005G185500 - -
20 Sobic.003G380300 cytochrome c, putative, expressed K08738: cytochrome c


Gene co-expression network
sample Sobic003G284600 Sobic003G284600 Sobic007G004300 Sobic007G004300 Sobic003G284600--Sobic007G004300 Sobic010G095400 Sobic010G095400 Sobic003G284600--Sobic010G095400 Sobic006G120900 Sobic006G120900 Sobic003G284600--Sobic006G120900 Sobic004G176200 Sobic004G176200 Sobic003G284600--Sobic004G176200 Sobic001G408400 Sobic001G408400 Sobic003G284600--Sobic001G408400 Sobic008G054200 Sobic008G054200 Sobic003G284600--Sobic008G054200 Sobic004G074600 Sobic004G074600 Sobic003G284600--Sobic004G074600 Sobic003G040700 Sobic003G040700 Sobic003G284600--Sobic003G040700 Sobic002G103800 Sobic002G103800 Sobic003G284600--Sobic002G103800 Sobic007G004300--Sobic004G176200 Sobic006G115100 Sobic006G115100 Sobic007G004300--Sobic006G115100 Sobic007G004300--Sobic002G103800 Sobic003G402800 Sobic003G402800 Sobic007G004300--Sobic003G402800 Sobic008G055500 Sobic008G055500 Sobic007G004300--Sobic008G055500 Sobic003G235100 Sobic003G235100 Sobic007G004300--Sobic003G235100 Sobic003G385300 Sobic003G385300 Sobic007G004300--Sobic003G385300 Sobic009G252200 Sobic009G252200 Sobic007G004300--Sobic009G252200 Sobic002G180800 Sobic002G180800 Sobic007G004300--Sobic002G180800 Sobic010G095400--Sobic004G176200 Sobic002G007800 Sobic002G007800 Sobic010G095400--Sobic002G007800 Sobic002G368100 Sobic002G368100 Sobic010G095400--Sobic002G368100 Sobic004G074900 Sobic004G074900 Sobic010G095400--Sobic004G074900 Sobic003G238250 Sobic003G238250 Sobic010G095400--Sobic003G238250 Sobic007G101600 Sobic007G101600 Sobic010G095400--Sobic007G101600 Sobic008G141600 Sobic008G141600 Sobic010G095400--Sobic008G141600 Sobic010G006800 Sobic010G006800 Sobic010G095400--Sobic010G006800 Sobic010G095400--Sobic002G103800 Sobic004G173700 Sobic004G173700 Sobic006G120900--Sobic004G173700 Sobic003G234500 Sobic003G234500 Sobic006G120900--Sobic003G234500 Sobic003G089100 Sobic003G089100 Sobic006G120900--Sobic003G089100 Sobic003G129900 Sobic003G129900 Sobic006G120900--Sobic003G129900 Sobic003G380300 Sobic003G380300 Sobic006G120900--Sobic003G380300 Sobic003G212000 Sobic003G212000 Sobic006G120900--Sobic003G212000 Sobic001G387200 Sobic001G387200 Sobic006G120900--Sobic001G387200 Sobic002G420600 Sobic002G420600 Sobic006G120900--Sobic002G420600 Sobic003G137600 Sobic003G137600 Sobic006G120900--Sobic003G137600 Sobic004G176200--Sobic003G385300 Sobic004G176200--Sobic002G103800 Sobic004G176200--Sobic007G004300 Sobic004G077300 Sobic004G077300 Sobic004G176200--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic004G176200--Sobic004G064200 Sobic001G257800 Sobic001G257800 Sobic004G176200--Sobic001G257800 Sobic004G176200--Sobic002G180800 Sobic001G356200 Sobic001G356200 Sobic004G176200--Sobic001G356200 Sobic006G080700 Sobic006G080700 Sobic004G176200--Sobic006G080700 Sobic001G408400--Sobic006G120900 Sobic001G408400--Sobic002G420600 Sobic001G408400--Sobic003G380300 Sobic010G253400 Sobic010G253400 Sobic001G408400--Sobic010G253400 Sobic001G408400--Sobic003G137600 Sobic001G408400--Sobic008G141600 Sobic001G408400--Sobic003G234500 Sobic005G145201 Sobic005G145201 Sobic001G408400--Sobic005G145201 Sobic001G408400--Sobic004G173700 Sobic008G078200 Sobic008G078200 Sobic008G054200--Sobic008G078200 Sobic008G054200--Sobic004G064200 Sobic003G014200 Sobic003G014200 Sobic008G054200--Sobic003G014200 Sobic004G168200 Sobic004G168200 Sobic008G054200--Sobic004G168200 Sobic009G068400 Sobic009G068400 Sobic008G054200--Sobic009G068400 Sobic007G198900 Sobic007G198900 Sobic008G054200--Sobic007G198900 Sobic008G054200--Sobic002G180800 Sobic004G046700 Sobic004G046700 Sobic008G054200--Sobic004G046700 Sobic001G211700 Sobic001G211700 Sobic008G054200--Sobic001G211700 Sobic002G389600 Sobic002G389600 Sobic004G074600--Sobic002G389600 Sobic007G039200 Sobic007G039200 Sobic004G074600--Sobic007G039200 Sobic006G171600 Sobic006G171600 Sobic004G074600--Sobic006G171600 Sobic004G250800 Sobic004G250800 Sobic004G074600--Sobic004G250800 Sobic008G166100 Sobic008G166100 Sobic004G074600--Sobic008G166100 Sobic004G062200 Sobic004G062200 Sobic004G074600--Sobic004G062200 Sobic001G135800 Sobic001G135800 Sobic004G074600--Sobic001G135800 Sobic002G414800 Sobic002G414800 Sobic004G074600--Sobic002G414800 Sobic004G279200 Sobic004G279200 Sobic004G074600--Sobic004G279200 Sobic002G362500 Sobic002G362500 Sobic003G040700--Sobic002G362500 Sobic003G040700--Sobic004G074900 Sobic007G138000 Sobic007G138000 Sobic003G040700--Sobic007G138000 Sobic003G040700--Sobic007G101600 Sobic003G040700--Sobic004G062200 Sobic003G040700--Sobic007G039200 Sobic006G267100 Sobic006G267100 Sobic003G040700--Sobic006G267100 Sobic001G073700 Sobic001G073700 Sobic003G040700--Sobic001G073700 Sobic003G040700--Sobic002G389600 Sobic010G114200 Sobic010G114200 Sobic002G103800--Sobic010G114200 Sobic006G150300 Sobic006G150300 Sobic002G103800--Sobic006G150300 Sobic001G241401 Sobic001G241401 Sobic002G103800--Sobic001G241401 Sobic007G112500 Sobic007G112500 Sobic002G103800--Sobic007G112500 Sobic005G135100 Sobic005G135100 Sobic002G103800--Sobic005G135100 Sobic002G103800--Sobic004G064200 Sobic007G176900 Sobic007G176900 Sobic002G103800--Sobic007G176900 Sobic004G042501 Sobic004G042501 Sobic002G103800--Sobic004G042501 Sobic006G097400 Sobic006G097400 Sobic002G103800--Sobic006G097400
Octagon: transcription factors


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