Gene annotation
Transcriptome id Sobic.005G225100.1,Sobic.005G225100.2,Sobic.005G225100.3
Synonym Sb05g027390
Functional annotation expressed protein
UniProt C5Y8H1 , A0A1Z5RK01 , A0A1Z5RKG8
Pfam PF07762
Panther DB PTHR33074 PTHR33074:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g39710.1 : expressed protein
MaizeGDB (Corn) Zm00025a039129
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G411300 expressed protein -
2 Sobic.002G057400 expressed protein K16586: HAUS augmin-like complex subunit 3
3 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
4 Sobic.002G007800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
5 Sobic.005G063200 expressed protein -
6 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
7 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
8 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.003G211800 expressed protein -
10 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
11 Sobic.005G225500 expressed protein -
12 Sobic.007G142600 DUF593 domain containing protein, expressed -
13 Sobic.002G074800 - -
14 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
15 Sobic.008G054200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@csAtPR5, putative, expressed -
16 Sobic.009G007300 expressed protein -
17 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
18 Sobic.006G080700 CSLH1 - cellulose synthase-like family H, expressed -
19 Sobic.005G185500 - -
20 Sobic.003G236000 CGMC_MAPKCMGC_2.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3


Gene co-expression network
sample Sobic005G225100 Sobic005G225100 Sobic003G411300 Sobic003G411300 Sobic005G225100--Sobic003G411300 Sobic002G057400 Sobic002G057400 Sobic005G225100--Sobic002G057400 Sobic003G402800 Sobic003G402800 Sobic005G225100--Sobic003G402800 Sobic002G007800 Sobic002G007800 Sobic005G225100--Sobic002G007800 Sobic005G063200 Sobic005G063200 Sobic005G225100--Sobic005G063200 Sobic003G385300 Sobic003G385300 Sobic005G225100--Sobic003G385300 Sobic003G353700 Sobic003G353700 Sobic005G225100--Sobic003G353700 Sobic009G106700 Sobic009G106700 Sobic005G225100--Sobic009G106700 Sobic003G211800 Sobic003G211800 Sobic005G225100--Sobic003G211800 Sobic003G411300--Sobic005G063200 Sobic003G411300--Sobic003G211800 Sobic003G411300--Sobic009G106700 Sobic009G007300 Sobic009G007300 Sobic003G411300--Sobic009G007300 Sobic004G168900 Sobic004G168900 Sobic003G411300--Sobic004G168900 Sobic002G097200 Sobic002G097200 Sobic003G411300--Sobic002G097200 Sobic005G225500 Sobic005G225500 Sobic003G411300--Sobic005G225500 Sobic009G113500 Sobic009G113500 Sobic003G411300--Sobic009G113500 Sobic002G099700 Sobic002G099700 Sobic003G411300--Sobic002G099700 Sobic002G057400--Sobic003G402800 Sobic002G304700 Sobic002G304700 Sobic002G057400--Sobic002G304700 Sobic002G057400--Sobic005G225100 Sobic002G057400--Sobic003G385300 Sobic010G160300 Sobic010G160300 Sobic002G057400--Sobic010G160300 Sobic008G055500 Sobic008G055500 Sobic002G057400--Sobic008G055500 Sobic002G057400--Sobic002G007800 Sobic002G057400--Sobic005G063200 Sobic001G501900 Sobic001G501900 Sobic002G057400--Sobic001G501900 Sobic003G402800--Sobic003G385300 Sobic001G257800 Sobic001G257800 Sobic003G402800--Sobic001G257800 Sobic003G402800--Sobic008G055500 Sobic002G074800 Sobic002G074800 Sobic003G402800--Sobic002G074800 Sobic005G048500 Sobic005G048500 Sobic003G402800--Sobic005G048500 Sobic005G185500 Sobic005G185500 Sobic003G402800--Sobic005G185500 Sobic004G064200 Sobic004G064200 Sobic003G402800--Sobic004G064200 Sobic009G046900 Sobic009G046900 Sobic003G402800--Sobic009G046900 Sobic001G149000 Sobic001G149000 Sobic003G402800--Sobic001G149000 Sobic002G007800--Sobic002G304700 Sobic002G007800--Sobic009G106700 Sobic002G007800--Sobic010G160300 Sobic010G095400 Sobic010G095400 Sobic002G007800--Sobic010G095400 Sobic006G166400 Sobic006G166400 Sobic002G007800--Sobic006G166400 Sobic002G007800--Sobic001G501900 Sobic002G007800--Sobic002G057400 Sobic002G007800--Sobic003G211800 Sobic002G007800--Sobic003G385300 Sobic001G384200 Sobic001G384200 Sobic005G063200--Sobic001G384200 Sobic001G280500 Sobic001G280500 Sobic005G063200--Sobic001G280500 Sobic008G166100 Sobic008G166100 Sobic005G063200--Sobic008G166100 Sobic005G063200--Sobic003G211800 Sobic005G063200--Sobic001G149000 Sobic001G076600 Sobic001G076600 Sobic005G063200--Sobic001G076600 Sobic005G063200--Sobic002G097200 Sobic005G063200--Sobic003G385300 Sobic005G063200--Sobic009G106700 Sobic003G385300--Sobic001G149000 Sobic003G385300--Sobic003G402800 Sobic004G077300 Sobic004G077300 Sobic003G385300--Sobic004G077300 Sobic003G385300--Sobic004G064200 Sobic004G176200 Sobic004G176200 Sobic003G385300--Sobic004G176200 Sobic003G385300--Sobic001G257800 Sobic003G385300--Sobic005G225500 Sobic007G039200 Sobic007G039200 Sobic003G385300--Sobic007G039200 Sobic003G385300--Sobic002G074800 Sobic007G192400 Sobic007G192400 Sobic003G353700--Sobic007G192400 Sobic008G036600 Sobic008G036600 Sobic003G353700--Sobic008G036600 Sobic003G353700--Sobic005G063200 Sobic001G024400 Sobic001G024400 Sobic003G353700--Sobic001G024400 Sobic003G353700--Sobic007G039200 Sobic010G181600 Sobic010G181600 Sobic003G353700--Sobic010G181600 Sobic003G236000 Sobic003G236000 Sobic003G353700--Sobic003G236000 Sobic004G074600 Sobic004G074600 Sobic003G353700--Sobic004G074600 Sobic008G006000 Sobic008G006000 Sobic003G353700--Sobic008G006000 Sobic009G106700--Sobic003G211800 Sobic006G162500 Sobic006G162500 Sobic009G106700--Sobic006G162500 Sobic009G145000 Sobic009G145000 Sobic009G106700--Sobic009G145000 Sobic004G328200 Sobic004G328200 Sobic009G106700--Sobic004G328200 Sobic002G418300 Sobic002G418300 Sobic009G106700--Sobic002G418300 Sobic009G106700--Sobic009G113500 Sobic004G203150 Sobic004G203150 Sobic009G106700--Sobic004G203150 Sobic002G189500 Sobic002G189500 Sobic009G106700--Sobic002G189500 Sobic009G106700--Sobic005G225500 Sobic003G211800--Sobic002G418300 Sobic001G417700 Sobic001G417700 Sobic003G211800--Sobic001G417700 Sobic009G048700 Sobic009G048700 Sobic003G211800--Sobic009G048700 Sobic003G211800--Sobic009G145000 Sobic009G008000 Sobic009G008000 Sobic003G211800--Sobic009G008000 Sobic002G243400 Sobic002G243400 Sobic003G211800--Sobic002G243400 Sobic008G056600 Sobic008G056600 Sobic003G211800--Sobic008G056600 Sobic001G136000 Sobic001G136000 Sobic003G211800--Sobic001G136000 Sobic003G211800--Sobic002G099700
Octagon: transcription factors


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