Gene annotation
Transcriptome id Sobic.001G179800.5,Sobic.001G179800.3,Sobic.001G179800.4,Sobic.001G179800.6,Sobic.001G179800.1,Sobic.001G179800.2
Synonym ALPHA-SNAP2, Sb01g015660, ASNAP
Functional annotation alpha-soluble NSF attachment protein, putative, expressed
UniProt A0A1Z5S671 , C5WU69
Pfam PF14938
Panther DB PTHR13768 PTHR13768:SF8
NCBI CDD KOG1586; Protein required for fusion of vesicles in vesicular transport, alpha-SNAP
KEGG Orthology K15296; NAPA, SNAPA, alpha-soluble NSF attachment protein
Gene Ontology GO:0006886; intracellular protein transport


Orthologs (automatic annotation)
TAIR AT3G56190 : alpha-soluble NSF attachment protein 2
RAP-DB (Rice) LOC_Os08g18110.1 : alpha-soluble NSF attachment protein, putative, expressed
MaizeGDB (Corn) Zm00025a007114 , Zm00025a030597
Brachypodium KQJ95932
Barley -
Wheat TraesCS7A02G292400 , TraesCS7D02G284600 , TraesCS7B02G182700
Populus -


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cDNA sequences
Sobic.001G179800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G007800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
2 Sobic.002G057400 expressed protein K16586: HAUS augmin-like complex subunit 3
3 Sobic.002G160100 expressed protein K14001: SIL1, nucleotide exchange factor SIL1
4 Sobic.006G219900 csAtPR5, putative, expressed -
5 Sobic.001G501900 appr-1-p processing enzyme family protein, putative, expressed -
6 Sobic.002G304700 RFT1, putative, expressed K06316: oligosaccharide translocation protein RFT1
7 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
8 Sobic.002G139600 2-phosphoglycerate kinase-related, putative, expressed -
9 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
10 Sobic.010G171000 phospholipid-transporting ATPase 4, putative, expressed K01530: phospholipid-translocating ATPase
11 Sobic.002G265300 acyl-coenzyme A thioesterase 10, mitochondrial precursor, putative, expressed K17361: acyl-coenzyme A thioesterase 9
12 Sobic.003G377000 powdery mildew resistant protein 5, putative, expressed -
13 Sobic.003G308800 transmembrane protein 56, putative, expressed -
14 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
15 Sobic.001G404900 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
16 Sobic.003G305900 expressed protein -
17 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
18 Sobic.001G050500 galactosyltransferase family protein, putative, expressed -
19 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
20 Sobic.001G057400 expressed protein -


Gene co-expression network
sample Sobic001G179800 Sobic001G179800 Sobic002G007800 Sobic002G007800 Sobic001G179800--Sobic002G007800 Sobic002G057400 Sobic002G057400 Sobic001G179800--Sobic002G057400 Sobic002G160100 Sobic002G160100 Sobic001G179800--Sobic002G160100 Sobic006G219900 Sobic006G219900 Sobic001G179800--Sobic006G219900 Sobic001G501900 Sobic001G501900 Sobic001G179800--Sobic001G501900 Sobic002G304700 Sobic002G304700 Sobic001G179800--Sobic002G304700 Sobic010G160300 Sobic010G160300 Sobic001G179800--Sobic010G160300 Sobic002G139600 Sobic002G139600 Sobic001G179800--Sobic002G139600 Sobic003G117800 Sobic003G117800 Sobic001G179800--Sobic003G117800 Sobic002G007800--Sobic002G304700 Sobic009G106700 Sobic009G106700 Sobic002G007800--Sobic009G106700 Sobic002G007800--Sobic010G160300 Sobic010G095400 Sobic010G095400 Sobic002G007800--Sobic010G095400 Sobic006G166400 Sobic006G166400 Sobic002G007800--Sobic006G166400 Sobic002G007800--Sobic001G501900 Sobic002G007800--Sobic002G057400 Sobic003G211800 Sobic003G211800 Sobic002G007800--Sobic003G211800 Sobic003G385300 Sobic003G385300 Sobic002G007800--Sobic003G385300 Sobic003G402800 Sobic003G402800 Sobic002G057400--Sobic003G402800 Sobic002G057400--Sobic002G304700 Sobic005G225100 Sobic005G225100 Sobic002G057400--Sobic005G225100 Sobic002G057400--Sobic003G385300 Sobic002G057400--Sobic010G160300 Sobic008G055500 Sobic008G055500 Sobic002G057400--Sobic008G055500 Sobic002G057400--Sobic002G007800 Sobic005G063200 Sobic005G063200 Sobic002G057400--Sobic005G063200 Sobic002G057400--Sobic001G501900 Sobic002G160100--Sobic002G007800 Sobic002G160100--Sobic010G095400 Sobic001G490950 Sobic001G490950 Sobic002G160100--Sobic001G490950 Sobic004G032600 Sobic004G032600 Sobic002G160100--Sobic004G032600 Sobic002G160100--Sobic006G219900 Sobic002G368100 Sobic002G368100 Sobic002G160100--Sobic002G368100 Sobic002G160100--Sobic001G179800 Sobic003G392275 Sobic003G392275 Sobic002G160100--Sobic003G392275 Sobic002G102300 Sobic002G102300 Sobic002G160100--Sobic002G102300 Sobic004G186300 Sobic004G186300 Sobic006G219900--Sobic004G186300 Sobic006G219900--Sobic001G490950 Sobic006G219900--Sobic004G032600 Sobic001G414100 Sobic001G414100 Sobic006G219900--Sobic001G414100 Sobic006G219900--Sobic002G160100 Sobic006G219900--Sobic003G117800 Sobic006G219900--Sobic003G392275 Sobic004G098800 Sobic004G098800 Sobic006G219900--Sobic004G098800 Sobic006G219900--Sobic002G102300 Sobic004G350700 Sobic004G350700 Sobic001G501900--Sobic004G350700 Sobic001G501900--Sobic003G385300 Sobic001G501900--Sobic008G055500 Sobic001G501900--Sobic002G304700 Sobic001G501900--Sobic010G160300 Sobic004G077300 Sobic004G077300 Sobic001G501900--Sobic004G077300 Sobic001G424800 Sobic001G424800 Sobic001G501900--Sobic001G424800 Sobic008G152700 Sobic008G152700 Sobic001G501900--Sobic008G152700 Sobic001G501900--Sobic003G117800 Sobic002G304700--Sobic010G160300 Sobic006G156400 Sobic006G156400 Sobic002G304700--Sobic006G156400 Sobic001G280500 Sobic001G280500 Sobic002G304700--Sobic001G280500 Sobic002G304700--Sobic003G385300 Sobic001G149000 Sobic001G149000 Sobic002G304700--Sobic001G149000 Sobic002G304700--Sobic004G077300 Sobic002G304700--Sobic002G007800 Sobic002G304700--Sobic009G106700 Sobic002G304700--Sobic005G063200 Sobic010G160300--Sobic002G304700 Sobic010G160300--Sobic001G280500 Sobic010G160300--Sobic005G063200 Sobic001G114200 Sobic001G114200 Sobic010G160300--Sobic001G114200 Sobic010G160300--Sobic001G501900 Sobic010G160300--Sobic004G350700 Sobic010G160300--Sobic002G007800 Sobic010G160300--Sobic003G117800 Sobic010G160300--Sobic001G149000 Sobic003G377000 Sobic003G377000 Sobic002G139600--Sobic003G377000 Sobic002G139600--Sobic002G007800 Sobic002G431000 Sobic002G431000 Sobic002G139600--Sobic002G431000 Sobic004G198800 Sobic004G198800 Sobic002G139600--Sobic004G198800 Sobic002G139600--Sobic002G160100 Sobic002G139600--Sobic001G179800 Sobic004G192800 Sobic004G192800 Sobic002G139600--Sobic004G192800 SobicK043400 SobicK043400 Sobic002G139600--SobicK043400 Sobic003G308800 Sobic003G308800 Sobic002G139600--Sobic003G308800 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G394500 Sobic003G394500 Sobic003G117800--Sobic003G394500 Sobic001G057400 Sobic001G057400 Sobic003G117800--Sobic001G057400 Sobic003G117800--Sobic008G152700 Sobic003G117800--Sobic001G149000 Sobic001G356200 Sobic001G356200 Sobic003G117800--Sobic001G356200 Sobic001G385000 Sobic001G385000 Sobic003G117800--Sobic001G385000 Sobic009G046900 Sobic009G046900 Sobic003G117800--Sobic009G046900
Octagon: transcription factors


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