Gene annotation
Transcriptome id Sobic.001G404900.1
Synonym Sb01g038300, MOS5, UBA1, ATUBA1
Functional annotation ubiquitin-activating enzyme, putative, expressed
UniProt A0A1Z5SA05
Pfam PF16191 PF09358 PF16190 PF10585 PF00899
Panther DB PTHR10953 PTHR10953:SF154
NCBI CDD -
KEGG Orthology K03178; UBE1, ubiquitin-activating enzyme E1
Gene Ontology GO:0008641; ubiquitin-like modifier activating enzyme activity


Orthologs (automatic annotation)
TAIR AT5G06460 : ubiquitin activating enzyme 2
RAP-DB (Rice) LOC_Os03g18380.3 : ubiquitin-activating enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a049262 , Zm00025a002020
Brachypodium PNT77575 , KQK14498 , KQK14497
Barley HORVU2Hr1G014440.1 , HORVU2Hr1G014440.3 , HORVU2Hr1G014440.2 , HORVU2Hr1G014440.5 , HORVU2Hr1G014440.4 , HORVU2Hr1G014440.7 , HORVU2Hr1G014440.6 , HORVU4Hr1G055880.1 , HORVU4Hr1G055880.2 , HORVU4Hr1G055880.3 , HORVU4Hr1G055880.4 , HORVU4Hr1G055880.5 , HORVU4Hr1G055880.6 , HORVU4Hr1G055880.7 , HORVU4Hr1G055880.8 , HORVU4Hr1G055880.9
Wheat TraesCS2A02G088900 , TraesCS2A02G088900 , TraesCS2A02G088900 , TraesCS1A02G053700 , TraesCS2D02G086700 , TraesCS2D02G086700 , TraesCS4A02G111700 , TraesCS4A02G111700 , TraesCS2B02G104300 , TraesCS4B02G192100 , TraesCS4B02G192100 , TraesCS4D02G193400 , TraesCS4D02G193400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G116900 CW-type Zinc Finger, putative, expressed -
2 Sobic.001G342900 ubiquinone biosynthesis protein COQ9, mitochondrial precursor, putative, expressed K18587: ubiquinone biosynthesis protein COQ9
3 Sobic.009G128500 CBS domain containing protein, expressed K16302: metal transporter CNNM
4 Sobic.002G198100 pentatricopeptide, putative, expressed -
5 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
6 Sobic.002G095100 RNA-binding region RNP-1, putative, expressed -
7 Sobic.001G532400 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
8 Sobic.001G356100 GPI-anchored wall transfer protein 1, putative, expressed K05283: glucosaminylphosphatidylinositol acyltransferase
9 Sobic.009G217400 regulator of chromosome condensation, putative, expressed -
10 Sobic.006G250800 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
11 Sobic.001G374000 cation efflux family protein, putative, expressed -
12 Sobic.002G290100 expressed protein K08739: DNA mismatch repair protein MLH3
13 Sobic.003G409900 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
14 Sobic.002G304700 RFT1, putative, expressed K06316: oligosaccharide translocation protein RFT1
15 Sobic.002G057400 expressed protein K16586: HAUS augmin-like complex subunit 3
16 Sobic.007G182000 hydroxymethylglutaryl-CoA synthase("PubMedID : 26759170,PubMedID : 24597475")@hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
17 Sobic.004G263500 DnaK family protein, putative, expressed K09486: hypoxia up-regulated 1
18 Sobic.001G179800 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
19 Sobic.001G399700 exonuclease, putative, expressed -
20 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G404900 Sobic001G404900 Sobic009G116900 Sobic009G116900 Sobic001G404900--Sobic009G116900 Sobic001G342900 Sobic001G342900 Sobic001G404900--Sobic001G342900 Sobic009G128500 Sobic009G128500 Sobic001G404900--Sobic009G128500 Sobic002G198100 Sobic002G198100 Sobic001G404900--Sobic002G198100 Sobic003G235100 Sobic003G235100 Sobic001G404900--Sobic003G235100 Sobic002G095100 Sobic002G095100 Sobic001G404900--Sobic002G095100 Sobic001G532400 Sobic001G532400 Sobic001G404900--Sobic001G532400 Sobic001G356100 Sobic001G356100 Sobic001G404900--Sobic001G356100 Sobic009G217400 Sobic009G217400 Sobic001G404900--Sobic009G217400 Sobic007G172700 Sobic007G172700 Sobic009G116900--Sobic007G172700 Sobic009G116900--Sobic003G235100 Sobic001G257800 Sobic001G257800 Sobic009G116900--Sobic001G257800 Sobic006G250800 Sobic006G250800 Sobic009G116900--Sobic006G250800 Sobic004G350700 Sobic004G350700 Sobic009G116900--Sobic004G350700 Sobic009G116900--Sobic001G404900 Sobic008G055500 Sobic008G055500 Sobic009G116900--Sobic008G055500 Sobic008G152700 Sobic008G152700 Sobic009G116900--Sobic008G152700 Sobic009G116900--Sobic002G198100 Sobic001G342900--Sobic006G250800 Sobic001G342900--Sobic009G116900 Sobic001G342900--Sobic001G404900 Sobic004G290100 Sobic004G290100 Sobic001G342900--Sobic004G290100 Sobic002G306100 Sobic002G306100 Sobic001G342900--Sobic002G306100 Sobic003G193500 Sobic003G193500 Sobic001G342900--Sobic003G193500 Sobic001G342900--Sobic009G128500 Sobic007G087000 Sobic007G087000 Sobic001G342900--Sobic007G087000 Sobic001G342900--Sobic003G235100 Sobic010G169900 Sobic010G169900 Sobic009G128500--Sobic010G169900 Sobic001G308400 Sobic001G308400 Sobic009G128500--Sobic001G308400 Sobic009G128500--Sobic003G193500 Sobic009G122500 Sobic009G122500 Sobic009G128500--Sobic009G122500 Sobic002G355800 Sobic002G355800 Sobic009G128500--Sobic002G355800 Sobic009G128500--Sobic009G116900 Sobic010G223400 Sobic010G223400 Sobic009G128500--Sobic010G223400 Sobic003G021600 Sobic003G021600 Sobic009G128500--Sobic003G021600 Sobic001G490900 Sobic001G490900 Sobic009G128500--Sobic001G490900 Sobic002G198100--Sobic009G116900 Sobic002G198100--Sobic003G235100 Sobic006G115100 Sobic006G115100 Sobic002G198100--Sobic006G115100 Sobic007G022600 Sobic007G022600 Sobic002G198100--Sobic007G022600 Sobic002G198100--Sobic001G356100 Sobic002G084800 Sobic002G084800 Sobic002G198100--Sobic002G084800 Sobic002G200000 Sobic002G200000 Sobic002G198100--Sobic002G200000 Sobic008G037700 Sobic008G037700 Sobic002G198100--Sobic008G037700 Sobic003G213400 Sobic003G213400 Sobic002G198100--Sobic003G213400 Sobic009G046900 Sobic009G046900 Sobic003G235100--Sobic009G046900 Sobic007G004300 Sobic007G004300 Sobic003G235100--Sobic007G004300 Sobic003G235100--Sobic009G116900 Sobic003G235100--Sobic002G084800 Sobic005G145201 Sobic005G145201 Sobic003G235100--Sobic005G145201 Sobic003G235100--Sobic008G152700 Sobic003G402800 Sobic003G402800 Sobic003G235100--Sobic003G402800 Sobic003G235100--Sobic004G350700 Sobic004G107100 Sobic004G107100 Sobic003G235100--Sobic004G107100 Sobic002G304700 Sobic002G304700 Sobic002G095100--Sobic002G304700 Sobic002G057400 Sobic002G057400 Sobic002G095100--Sobic002G057400 Sobic010G160300 Sobic010G160300 Sobic002G095100--Sobic010G160300 Sobic002G007800 Sobic002G007800 Sobic002G095100--Sobic002G007800 Sobic006G156400 Sobic006G156400 Sobic002G095100--Sobic006G156400 Sobic002G060400 Sobic002G060400 Sobic002G095100--Sobic002G060400 Sobic001G501900 Sobic001G501900 Sobic002G095100--Sobic001G501900 Sobic002G095100--Sobic001G404900 Sobic007G086600 Sobic007G086600 Sobic002G095100--Sobic007G086600 Sobic003G409900 Sobic003G409900 Sobic001G532400--Sobic003G409900 Sobic001G532400--Sobic003G021600 Sobic003G114400 Sobic003G114400 Sobic001G532400--Sobic003G114400 Sobic001G205100 Sobic001G205100 Sobic001G532400--Sobic001G205100 Sobic001G188400 Sobic001G188400 Sobic001G532400--Sobic001G188400 Sobic003G365100 Sobic003G365100 Sobic001G532400--Sobic003G365100 Sobic006G060000 Sobic006G060000 Sobic001G532400--Sobic006G060000 Sobic001G389200 Sobic001G389200 Sobic001G532400--Sobic001G389200 Sobic002G252400 Sobic002G252400 Sobic001G532400--Sobic002G252400 Sobic004G263500 Sobic004G263500 Sobic001G356100--Sobic004G263500 Sobic007G118500 Sobic007G118500 Sobic001G356100--Sobic007G118500 Sobic003G394500 Sobic003G394500 Sobic001G356100--Sobic003G394500 Sobic001G455000 Sobic001G455000 Sobic001G356100--Sobic001G455000 Sobic006G232800 Sobic006G232800 Sobic001G356100--Sobic006G232800 Sobic001G356100--Sobic006G060000 Sobic001G356100--Sobic004G350700 Sobic001G114200 Sobic001G114200 Sobic001G356100--Sobic001G114200 Sobic010G133400 Sobic010G133400 Sobic001G356100--Sobic010G133400 Sobic007G182000 Sobic007G182000 Sobic009G217400--Sobic007G182000 Sobic009G217400--Sobic006G250800 Sobic002G307800 Sobic002G307800 Sobic009G217400--Sobic002G307800 Sobic003G433400 Sobic003G433400 Sobic009G217400--Sobic003G433400 Sobic009G217400--Sobic009G116900 Sobic003G092800 Sobic003G092800 Sobic009G217400--Sobic003G092800 Sobic001G253300 Sobic001G253300 Sobic009G217400--Sobic001G253300 Sobic009G217400--Sobic001G257800 Sobic002G180800 Sobic002G180800 Sobic009G217400--Sobic002G180800
Octagon: transcription factors


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