Gene annotation
Transcriptome id Sobic.001G356100.3,Sobic.001G356100.1,Sobic.001G356100.2
Synonym Sb01g034020
Functional annotation GPI-anchored wall transfer protein 1, putative, expressed
UniProt A0A1B6QMY2 , C5WYL5 , A0A1B6QMY4
Pfam PF06423
Panther DB PTHR20661
NCBI CDD KOG0411; Uncharacterized membrane protein
KEGG Orthology K05283; glucosaminylphosphatidylinositol acyltransferase
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0016021integral component of membrane GO:0006506GPI anchor biosynthetic process GO:0005789endoplasmic reticulum membrane


Orthologs (automatic annotation)
TAIR AT4G17910 : transferases, transferring acyl groups
RAP-DB (Rice) LOC_Os03g26090.1 : GPI-anchored wall transfer protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a052070 , Zm00025a002664
Brachypodium KQK21500
Barley -
Wheat TraesCS2A02G372200 , TraesCS2A02G372200 , TraesCS2A02G372200 , TraesCS2A02G372200 , TraesCS2D02G112600 , TraesCS2B02G130700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G263500 DnaK family protein, putative, expressed K09486: hypoxia up-regulated 1
2 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
3 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
4 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
5 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
6 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
7 Sobic.004G350700 kelch repeat protein, putative, expressed -
8 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
9 Sobic.010G133400 pantothenate kinase 4, putative, expressed -
10 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
11 Sobic.002G304700 RFT1, putative, expressed K06316: oligosaccharide translocation protein RFT1
12 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
13 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
14 Sobic.006G112500 CAF1 family ribonuclease containing protein, putative, expressed K01148: PARN, poly(A)-specific ribonuclease
15 Sobic.009G040250 - -
16 Sobic.009G116900 CW-type Zinc Finger, putative, expressed -
17 Sobic.007G172700 ECT5, putative, expressed -
18 Sobic.003G409900 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
19 Sobic.006G191000 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
20 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1


Gene co-expression network
sample Sobic001G356100 Sobic001G356100 Sobic004G263500 Sobic004G263500 Sobic001G356100--Sobic004G263500 Sobic007G118500 Sobic007G118500 Sobic001G356100--Sobic007G118500 Sobic003G394500 Sobic003G394500 Sobic001G356100--Sobic003G394500 Sobic001G455000 Sobic001G455000 Sobic001G356100--Sobic001G455000 Sobic006G232800 Sobic006G232800 Sobic001G356100--Sobic006G232800 Sobic006G060000 Sobic006G060000 Sobic001G356100--Sobic006G060000 Sobic004G350700 Sobic004G350700 Sobic001G356100--Sobic004G350700 Sobic001G114200 Sobic001G114200 Sobic001G356100--Sobic001G114200 Sobic010G133400 Sobic010G133400 Sobic001G356100--Sobic010G133400 Sobic004G263500--Sobic001G356100 Sobic004G263500--Sobic006G060000 Sobic004G263500--Sobic003G394500 Sobic008G055500 Sobic008G055500 Sobic004G263500--Sobic008G055500 Sobic001G378800 Sobic001G378800 Sobic004G263500--Sobic001G378800 Sobic004G263500--Sobic010G133400 Sobic004G263500--Sobic004G350700 Sobic004G263500--Sobic007G118500 Sobic001G389200 Sobic001G389200 Sobic004G263500--Sobic001G389200 Sobic007G118500--Sobic003G394500 Sobic004G060300 Sobic004G060300 Sobic007G118500--Sobic004G060300 Sobic002G070300 Sobic002G070300 Sobic007G118500--Sobic002G070300 Sobic007G118500--Sobic010G133400 Sobic007G118500--Sobic001G378800 Sobic007G118500--Sobic006G232800 Sobic007G118500--Sobic001G455000 Sobic007G118500--Sobic001G356100 Sobic008G171400 Sobic008G171400 Sobic007G118500--Sobic008G171400 Sobic003G117800 Sobic003G117800 Sobic003G394500--Sobic003G117800 Sobic001G385000 Sobic001G385000 Sobic003G394500--Sobic001G385000 Sobic003G394500--Sobic004G350700 Sobic003G394500--Sobic001G378800 Sobic003G394500--Sobic007G118500 Sobic003G190200 Sobic003G190200 Sobic003G394500--Sobic003G190200 Sobic003G394500--Sobic006G232800 Sobic007G030100 Sobic007G030100 Sobic003G394500--Sobic007G030100 Sobic001G424800 Sobic001G424800 Sobic003G394500--Sobic001G424800 Sobic004G151200 Sobic004G151200 Sobic001G455000--Sobic004G151200 Sobic003G397900 Sobic003G397900 Sobic001G455000--Sobic003G397900 Sobic001G455000--Sobic007G118500 Sobic008G019532 Sobic008G019532 Sobic001G455000--Sobic008G019532 Sobic001G455000--Sobic001G356100 Sobic003G130900 Sobic003G130900 Sobic001G455000--Sobic003G130900 Sobic001G455000--Sobic001G114200 Sobic001G445500 Sobic001G445500 Sobic001G455000--Sobic001G445500 Sobic001G455000--Sobic003G394500 Sobic006G232800--Sobic001G378800 Sobic006G232800--Sobic001G385000 Sobic006G232800--Sobic003G394500 Sobic001G149000 Sobic001G149000 Sobic006G232800--Sobic001G149000 Sobic010G086300 Sobic010G086300 Sobic006G232800--Sobic010G086300 Sobic001G280500 Sobic001G280500 Sobic006G232800--Sobic001G280500 Sobic002G313100 Sobic002G313100 Sobic006G232800--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic006G232800--Sobic002G392400 Sobic006G265800 Sobic006G265800 Sobic006G232800--Sobic006G265800 Sobic006G060000--Sobic008G055500 Sobic006G060000--Sobic004G350700 Sobic007G172700 Sobic007G172700 Sobic006G060000--Sobic007G172700 Sobic006G060000--Sobic001G114200 Sobic006G060000--Sobic003G394500 Sobic006G060000--Sobic001G389200 Sobic006G060000--Sobic004G263500 Sobic006G060000--Sobic003G117800 Sobic001G490900 Sobic001G490900 Sobic006G060000--Sobic001G490900 Sobic004G350700--Sobic008G055500 Sobic004G350700--Sobic003G394500 Sobic003G385300 Sobic003G385300 Sobic004G350700--Sobic003G385300 Sobic004G350700--Sobic001G424800 Sobic004G350700--Sobic006G060000 Sobic004G350700--Sobic001G149000 Sobic004G350700--Sobic007G172700 Sobic004G350700--Sobic001G114200 Sobic004G350700--Sobic003G117800 Sobic001G114200--Sobic004G350700 Sobic001G114200--Sobic006G060000 Sobic010G160300 Sobic010G160300 Sobic001G114200--Sobic010G160300 Sobic001G114200--Sobic003G117800 Sobic001G114200--Sobic003G394500 Sobic006G210700 Sobic006G210700 Sobic001G114200--Sobic006G210700 Sobic001G114200--Sobic001G490900 Sobic001G114200--Sobic007G030100 Sobic007G218600 Sobic007G218600 Sobic001G114200--Sobic007G218600 Sobic003G049200 Sobic003G049200 Sobic010G133400--Sobic003G049200 Sobic010G133400--Sobic007G118500 Sobic010G133400--Sobic001G378800 Sobic008G072500 Sobic008G072500 Sobic010G133400--Sobic008G072500 Sobic010G133400--Sobic004G263500 Sobic010G133400--Sobic001G356100 Sobic010G133400--Sobic003G394500 Sobic010G133400--Sobic008G171400 Sobic002G193500 Sobic002G193500 Sobic010G133400--Sobic002G193500
Octagon: transcription factors


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