Gene annotation
Transcriptome id Sobic.003G035601.1
Synonym -
Functional annotation -
UniProt A0A1W0VVK5
Pfam -
Panther DB -
NCBI CDD KOG0173; 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27430 : N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
RAP-DB (Rice) LOC_Os05g09490.2 : peptidase, T1 family, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G048400 - -
2 Sobic.008G141100 formin, putative, expressed -
3 Sobic.010G062900 expressed protein -
4 Sobic.006G045100 - -
5 Sobic.001G499500 la domain containing protein, putative, expressed K18757: la-related protein 1
6 Sobic.006G050100 expressed protein -
7 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
8 Sobic.002G362500 expressed protein -
9 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
10 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
11 Sobic.003G009000 harpin-induced protein, putative, expressed -
12 Sobic.003G392275 - -
13 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase
14 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
15 Sobic.001G322400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
16 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
17 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
18 Sobic.006G239500 plant protein of unknown function domain containing protein, expressed -
19 Sobic.002G102300 - -
20 Sobic.010G073900 expressed protein -


Gene co-expression network
sample Sobic003G035601 Sobic003G035601 Sobic009G048400 Sobic009G048400 Sobic003G035601--Sobic009G048400 Sobic008G141100 Sobic008G141100 Sobic003G035601--Sobic008G141100 Sobic010G062900 Sobic010G062900 Sobic003G035601--Sobic010G062900 Sobic006G045100 Sobic006G045100 Sobic003G035601--Sobic006G045100 Sobic001G499500 Sobic001G499500 Sobic003G035601--Sobic001G499500 Sobic006G050100 Sobic006G050100 Sobic003G035601--Sobic006G050100 Sobic001G073700 Sobic001G073700 Sobic003G035601--Sobic001G073700 Sobic002G362500 Sobic002G362500 Sobic003G035601--Sobic002G362500 Sobic009G106700 Sobic009G106700 Sobic003G035601--Sobic009G106700 Sobic003G040700 Sobic003G040700 Sobic009G048400--Sobic003G040700 Sobic010G128350 Sobic010G128350 Sobic009G048400--Sobic010G128350 Sobic010G010201 Sobic010G010201 Sobic009G048400--Sobic010G010201 Sobic007G039200 Sobic007G039200 Sobic009G048400--Sobic007G039200 Sobic007G138000 Sobic007G138000 Sobic009G048400--Sobic007G138000 Sobic001G322400 Sobic001G322400 Sobic009G048400--Sobic001G322400 Sobic010G073900 Sobic010G073900 Sobic009G048400--Sobic010G073900 Sobic006G267100 Sobic006G267100 Sobic009G048400--Sobic006G267100 Sobic009G048400--Sobic006G045100 Sobic008G141100--Sobic009G106700 Sobic006G239500 Sobic006G239500 Sobic008G141100--Sobic006G239500 Sobic002G199800 Sobic002G199800 Sobic008G141100--Sobic002G199800 Sobic009G238650 Sobic009G238650 Sobic008G141100--Sobic009G238650 Sobic006G156400 Sobic006G156400 Sobic008G141100--Sobic006G156400 Sobic004G349600 Sobic004G349600 Sobic008G141100--Sobic004G349600 Sobic005G120400 Sobic005G120400 Sobic008G141100--Sobic005G120400 Sobic008G141100--Sobic010G073900 Sobic003G407700 Sobic003G407700 Sobic008G141100--Sobic003G407700 Sobic002G309100 Sobic002G309100 Sobic010G062900--Sobic002G309100 Sobic003G009000 Sobic003G009000 Sobic010G062900--Sobic003G009000 Sobic009G098700 Sobic009G098700 Sobic010G062900--Sobic009G098700 Sobic010G062900--Sobic010G073900 Sobic001G485700 Sobic001G485700 Sobic010G062900--Sobic001G485700 Sobic001G183666 Sobic001G183666 Sobic010G062900--Sobic001G183666 Sobic010G062900--Sobic006G239500 Sobic001G130600 Sobic001G130600 Sobic010G062900--Sobic001G130600 Sobic010G005100 Sobic010G005100 Sobic010G062900--Sobic010G005100 Sobic006G045100--Sobic003G040700 Sobic006G045100--Sobic007G039200 Sobic006G045100--Sobic009G048400 Sobic004G074900 Sobic004G074900 Sobic006G045100--Sobic004G074900 Sobic006G045100--Sobic007G138000 Sobic007G101600 Sobic007G101600 Sobic006G045100--Sobic007G101600 Sobic006G045100--Sobic002G362500 Sobic006G045100--Sobic006G267100 Sobic002G389600 Sobic002G389600 Sobic006G045100--Sobic002G389600 Sobic001G499500--Sobic010G062900 Sobic001G499500--Sobic006G050100 Sobic004G215200 Sobic004G215200 Sobic001G499500--Sobic004G215200 Sobic001G499500--Sobic008G141100 Sobic002G383700 Sobic002G383700 Sobic001G499500--Sobic002G383700 Sobic007G086600 Sobic007G086600 Sobic001G499500--Sobic007G086600 Sobic003G022000 Sobic003G022000 Sobic001G499500--Sobic003G022000 Sobic001G053350 Sobic001G053350 Sobic001G499500--Sobic001G053350 Sobic010G255400 Sobic010G255400 Sobic001G499500--Sobic010G255400 Sobic006G050100--Sobic001G073700 Sobic006G050100--Sobic002G362500 Sobic006G050100--Sobic001G322400 Sobic006G050100--Sobic008G141100 Sobic006G050100--Sobic006G156400 Sobic009G025700 Sobic009G025700 Sobic006G050100--Sobic009G025700 Sobic001G072000 Sobic001G072000 Sobic006G050100--Sobic001G072000 Sobic006G050100--Sobic009G098700 Sobic006G050100--Sobic010G073900 Sobic009G201000 Sobic009G201000 Sobic001G073700--Sobic009G201000 Sobic001G073700--Sobic002G362500 Sobic001G073700--Sobic006G156400 Sobic001G073700--Sobic001G322400 Sobic001G073700--Sobic006G050100 Sobic003G352900 Sobic003G352900 Sobic001G073700--Sobic003G352900 Sobic008G166100 Sobic008G166100 Sobic001G073700--Sobic008G166100 Sobic001G073700--Sobic001G072000 Sobic001G073700--Sobic008G141100 Sobic002G362500--Sobic001G322400 Sobic002G362500--Sobic001G072000 Sobic002G362500--Sobic009G201000 Sobic002G362500--Sobic008G166100 Sobic002G362500--Sobic007G039200 Sobic009G163100 Sobic009G163100 Sobic002G362500--Sobic009G163100 Sobic004G113600 Sobic004G113600 Sobic002G362500--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic002G362500--Sobic001G387300 Sobic002G362500--Sobic004G074900 Sobic003G211800 Sobic003G211800 Sobic009G106700--Sobic003G211800 Sobic006G162500 Sobic006G162500 Sobic009G106700--Sobic006G162500 Sobic009G145000 Sobic009G145000 Sobic009G106700--Sobic009G145000 Sobic004G328200 Sobic004G328200 Sobic009G106700--Sobic004G328200 Sobic002G418300 Sobic002G418300 Sobic009G106700--Sobic002G418300 Sobic009G113500 Sobic009G113500 Sobic009G106700--Sobic009G113500 Sobic004G203150 Sobic004G203150 Sobic009G106700--Sobic004G203150 Sobic002G189500 Sobic002G189500 Sobic009G106700--Sobic002G189500 Sobic005G225500 Sobic005G225500 Sobic009G106700--Sobic005G225500
Octagon: transcription factors


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