Gene annotation
Transcriptome id Sobic.010G266800.1
Synonym Sb10g030180
Functional annotation DUF803 domain containing, putative, expressed
UniProt C5Z1V8
Pfam PF05653
Panther DB PTHR12570 PTHR12570:SF11
NCBI CDD KOG2922; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015693magnesium ion transport GO:0015095magnesium ion transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT2G21120 : Protein of unknown function (DUF803)
RAP-DB (Rice) LOC_Os06g50180.1 : DUF803 domain containing, putative, expressed
MaizeGDB (Corn) Zm00025a018488
Brachypodium KQK16724
Barley HORVU7Hr1G063300.11 , HORVU7Hr1G063300.10 , HORVU7Hr1G063300.12 , HORVU7Hr1G063300.5 , HORVU7Hr1G063300.4 , HORVU7Hr1G063300.7 , HORVU7Hr1G063300.6 , HORVU7Hr1G063300.1 , HORVU7Hr1G063300.3 , HORVU7Hr1G063300.2 , HORVU7Hr1G063300.9 , HORVU7Hr1G063300.8
Wheat TraesCS7A02G527900 , TraesCS7D02G515800 , TraesCS7B02G444600
Populus -


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cDNA sequences
Sobic.010G266800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G284400 jmjC domain containing protein, expressed -
2 Sobic.007G070500 OsFBL41 - F-box domain and LRR containing protein, expressed -
3 Sobic.003G385000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein kinase, putative, expressed -
4 Sobic.001G057600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
5 Sobic.003G043800 BT1 family protein, putative, expressed -
6 Sobic.008G129000 phosphatidic acid phosphatase-related, putative, expressed -
7 Sobic.008G014300 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
8 Sobic.001G284425 - -
9 Sobic.003G346100 expressed protein -
10 Sobic.002G368400 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
11 Sobic.006G230400 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
12 Sobic.010G178800 solute carrier family 35 member B1, putative, expressed K15275: solute carrier family 35 (UDP-galactose transporter), member B1
13 Sobic.003G311700 cyclase/dehydrase family protein, expressed K18588: coenzyme Q-binding protein COQ10
14 Sobic.001G408400 phosphatase, putative, expressed K07252: dolichyldiphosphatase
15 Sobic.004G278700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
16 Sobic.005G079500 OsFBX399 - F-box domain containing protein, expressed -
17 Sobic.009G050000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
18 Sobic.004G278000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
19 Sobic.006G118400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
20 Sobic.003G377700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)


Gene co-expression network
sample Sobic010G266800 Sobic010G266800 Sobic001G284400 Sobic001G284400 Sobic010G266800--Sobic001G284400 Sobic007G070500 Sobic007G070500 Sobic010G266800--Sobic007G070500 Sobic003G385000 Sobic003G385000 Sobic010G266800--Sobic003G385000 Sobic001G057600 Sobic001G057600 Sobic010G266800--Sobic001G057600 Sobic003G043800 Sobic003G043800 Sobic010G266800--Sobic003G043800 Sobic008G129000 Sobic008G129000 Sobic010G266800--Sobic008G129000 Sobic008G014300 Sobic008G014300 Sobic010G266800--Sobic008G014300 Sobic001G284425 Sobic001G284425 Sobic010G266800--Sobic001G284425 Sobic003G346100 Sobic003G346100 Sobic010G266800--Sobic003G346100 Sobic002G373600 Sobic002G373600 Sobic001G284400--Sobic002G373600 Sobic001G284400--Sobic001G284425 Sobic001G284400--Sobic008G129000 Sobic010G076700 Sobic010G076700 Sobic001G284400--Sobic010G076700 Sobic001G284400--Sobic003G385000 Sobic010G252900 Sobic010G252900 Sobic001G284400--Sobic010G252900 Sobic005G044300 Sobic005G044300 Sobic001G284400--Sobic005G044300 Sobic006G263100 Sobic006G263100 Sobic001G284400--Sobic006G263100 Sobic001G409900 Sobic001G409900 Sobic001G284400--Sobic001G409900 Sobic007G070500--Sobic003G385000 Sobic001G489150 Sobic001G489150 Sobic007G070500--Sobic001G489150 Sobic002G019750 Sobic002G019750 Sobic007G070500--Sobic002G019750 Sobic006G199700 Sobic006G199700 Sobic007G070500--Sobic006G199700 Sobic007G070500--Sobic001G284400 Sobic007G070500--Sobic010G266800 Sobic007G070500--Sobic003G043800 Sobic010G116700 Sobic010G116700 Sobic007G070500--Sobic010G116700 Sobic006G219900 Sobic006G219900 Sobic007G070500--Sobic006G219900 Sobic010G134700 Sobic010G134700 Sobic003G385000--Sobic010G134700 Sobic004G098800 Sobic004G098800 Sobic003G385000--Sobic004G098800 Sobic003G385000--Sobic001G284425 Sobic008G041450 Sobic008G041450 Sobic003G385000--Sobic008G041450 Sobic003G385000--Sobic002G373600 Sobic003G385000--Sobic001G284400 Sobic003G385000--Sobic007G070500 Sobic003G223800 Sobic003G223800 Sobic003G385000--Sobic003G223800 Sobic004G178700 Sobic004G178700 Sobic003G385000--Sobic004G178700 Sobic009G088800 Sobic009G088800 Sobic001G057600--Sobic009G088800 Sobic006G118400 Sobic006G118400 Sobic001G057600--Sobic006G118400 Sobic004G186300 Sobic004G186300 Sobic001G057600--Sobic004G186300 Sobic001G118300 Sobic001G118300 Sobic001G057600--Sobic001G118300 Sobic004G192800 Sobic004G192800 Sobic001G057600--Sobic004G192800 Sobic005G019100 Sobic005G019100 Sobic001G057600--Sobic005G019100 Sobic009G050000 Sobic009G050000 Sobic001G057600--Sobic009G050000 Sobic001G057600--Sobic005G044300 Sobic001G057600--Sobic008G129000 Sobic006G217300 Sobic006G217300 Sobic003G043800--Sobic006G217300 Sobic001G122500 Sobic001G122500 Sobic003G043800--Sobic001G122500 Sobic010G026300 Sobic010G026300 Sobic003G043800--Sobic010G026300 Sobic004G124500 Sobic004G124500 Sobic003G043800--Sobic004G124500 Sobic004G207900 Sobic004G207900 Sobic003G043800--Sobic004G207900 Sobic001G378200 Sobic001G378200 Sobic003G043800--Sobic001G378200 Sobic006G207900 Sobic006G207900 Sobic003G043800--Sobic006G207900 Sobic006G055400 Sobic006G055400 Sobic003G043800--Sobic006G055400 Sobic005G207400 Sobic005G207400 Sobic003G043800--Sobic005G207400 Sobic001G308700 Sobic001G308700 Sobic008G129000--Sobic001G308700 Sobic008G129000--Sobic001G284400 Sobic001G513300 Sobic001G513300 Sobic008G129000--Sobic001G513300 Sobic004G278000 Sobic004G278000 Sobic008G129000--Sobic004G278000 Sobic002G183400 Sobic002G183400 Sobic008G129000--Sobic002G183400 Sobic006G230400 Sobic006G230400 Sobic008G129000--Sobic006G230400 Sobic004G268200 Sobic004G268200 Sobic008G129000--Sobic004G268200 Sobic004G228700 Sobic004G228700 Sobic008G129000--Sobic004G228700 Sobic003G273000 Sobic003G273000 Sobic008G129000--Sobic003G273000 Sobic001G013200 Sobic001G013200 Sobic008G014300--Sobic001G013200 Sobic003G167000 Sobic003G167000 Sobic008G014300--Sobic003G167000 Sobic002G217500 Sobic002G217500 Sobic008G014300--Sobic002G217500 Sobic006G203900 Sobic006G203900 Sobic008G014300--Sobic006G203900 Sobic009G206600 Sobic009G206600 Sobic008G014300--Sobic009G206600 Sobic005G079500 Sobic005G079500 Sobic008G014300--Sobic005G079500 Sobic006G124300 Sobic006G124300 Sobic008G014300--Sobic006G124300 Sobic010G235000 Sobic010G235000 Sobic008G014300--Sobic010G235000 Sobic002G342000 Sobic002G342000 Sobic008G014300--Sobic002G342000 Sobic001G284425--Sobic003G385000 Sobic001G284425--Sobic001G284400 Sobic001G284425--Sobic002G373600 Sobic001G284425--Sobic006G199700 Sobic006G069200 Sobic006G069200 Sobic001G284425--Sobic006G069200 Sobic001G284425--Sobic010G076700 Sobic001G284425--Sobic003G223800 Sobic001G075800 Sobic001G075800 Sobic001G284425--Sobic001G075800 Sobic001G284425--Sobic010G134700 Sobic003G116600 Sobic003G116600 Sobic003G346100--Sobic003G116600 Sobic002G368400 Sobic002G368400 Sobic003G346100--Sobic002G368400 Sobic008G165000 Sobic008G165000 Sobic003G346100--Sobic008G165000 Sobic003G332401 Sobic003G332401 Sobic003G346100--Sobic003G332401 Sobic003G311700 Sobic003G311700 Sobic003G346100--Sobic003G311700 Sobic010G217200 Sobic010G217200 Sobic003G346100--Sobic010G217200 Sobic006G254600 Sobic006G254600 Sobic003G346100--Sobic006G254600 Sobic001G522900 Sobic001G522900 Sobic003G346100--Sobic001G522900 Sobic003G346100--Sobic001G013200
Octagon: transcription factors


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