Gene annotation
Transcriptome id Sobic.003G346100.1
Synonym Sb03g038970
Functional annotation expressed protein
UniProt C5XP12
Pfam PF11779
Panther DB PTHR33727
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06515 : Protein of unknown function (DUF3317)
RAP-DB (Rice) LOC_Os07g26550.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK16452
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G116600 syntaxin, putative, expressed K08488: syntaxin 7
2 Sobic.002G368400 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
3 Sobic.008G165000 LSD1 zinc finger domain containing protein, expressed -
4 Sobic.003G332401 - K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
5 Sobic.003G311700 cyclase/dehydrase family protein, expressed K18588: coenzyme Q-binding protein COQ10
6 Sobic.010G217200 ubiquitin-conjugating enzyme, putative, expressed K10583: UBE2S, ubiquitin-conjugating enzyme E2 S
7 Sobic.006G254600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
8 Sobic.001G522900 expressed protein -
9 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
10 Sobic.003G084750 - -
11 Sobic.001G518500 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
12 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7
13 Sobic.001G489700 prenyltransferase, putative, expressed K02257: COX10, ctaB, heme o synthase
14 Sobic.005G180700 zinc finger, C3HC4 type family protein, expressed -
15 Sobic.007G115900 SAM domain family protein, expressed -
16 Sobic.009G032300 CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
17 Sobic.002G401700 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
18 Sobic.002G040700 tetratricopeptide repeat, putative, expressed -
19 Sobic.007G177500 thaumatin, putative, expressed -
20 Sobic.001G281700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5


Gene co-expression network
sample Sobic003G346100 Sobic003G346100 Sobic003G116600 Sobic003G116600 Sobic003G346100--Sobic003G116600 Sobic002G368400 Sobic002G368400 Sobic003G346100--Sobic002G368400 Sobic008G165000 Sobic008G165000 Sobic003G346100--Sobic008G165000 Sobic003G332401 Sobic003G332401 Sobic003G346100--Sobic003G332401 Sobic003G311700 Sobic003G311700 Sobic003G346100--Sobic003G311700 Sobic010G217200 Sobic010G217200 Sobic003G346100--Sobic010G217200 Sobic006G254600 Sobic006G254600 Sobic003G346100--Sobic006G254600 Sobic001G522900 Sobic001G522900 Sobic003G346100--Sobic001G522900 Sobic001G013200 Sobic001G013200 Sobic003G346100--Sobic001G013200 Sobic002G090700 Sobic002G090700 Sobic003G116600--Sobic002G090700 Sobic010G007400 Sobic010G007400 Sobic003G116600--Sobic010G007400 Sobic005G184200 Sobic005G184200 Sobic003G116600--Sobic005G184200 Sobic004G159000 Sobic004G159000 Sobic003G116600--Sobic004G159000 Sobic004G339300 Sobic004G339300 Sobic003G116600--Sobic004G339300 Sobic001G367000 Sobic001G367000 Sobic003G116600--Sobic001G367000 Sobic004G202100 Sobic004G202100 Sobic003G116600--Sobic004G202100 Sobic001G309500 Sobic001G309500 Sobic003G116600--Sobic001G309500 Sobic002G401700 Sobic002G401700 Sobic003G116600--Sobic002G401700 Sobic002G368400--Sobic003G332401 Sobic002G368400--Sobic003G116600 Sobic009G199700 Sobic009G199700 Sobic002G368400--Sobic009G199700 Sobic009G059700 Sobic009G059700 Sobic002G368400--Sobic009G059700 Sobic002G368400--Sobic001G367000 Sobic001G526100 Sobic001G526100 Sobic002G368400--Sobic001G526100 Sobic001G283500 Sobic001G283500 Sobic002G368400--Sobic001G283500 Sobic007G195701 Sobic007G195701 Sobic002G368400--Sobic007G195701 Sobic002G368400--Sobic001G309500 Sobic010G243400 Sobic010G243400 Sobic008G165000--Sobic010G243400 Sobic008G165000--Sobic006G254600 Sobic001G489700 Sobic001G489700 Sobic008G165000--Sobic001G489700 Sobic002G378200 Sobic002G378200 Sobic008G165000--Sobic002G378200 Sobic001G085500 Sobic001G085500 Sobic008G165000--Sobic001G085500 Sobic004G094300 Sobic004G094300 Sobic008G165000--Sobic004G094300 Sobic002G040700 Sobic002G040700 Sobic008G165000--Sobic002G040700 Sobic001G512400 Sobic001G512400 Sobic008G165000--Sobic001G512400 Sobic008G165000--Sobic001G522900 Sobic002G296300 Sobic002G296300 Sobic003G332401--Sobic002G296300 Sobic003G115800 Sobic003G115800 Sobic003G332401--Sobic003G115800 Sobic003G332401--Sobic003G311700 Sobic009G246950 Sobic009G246950 Sobic003G332401--Sobic009G246950 Sobic007G186300 Sobic007G186300 Sobic003G332401--Sobic007G186300 Sobic003G332401--Sobic002G090700 Sobic003G007500 Sobic003G007500 Sobic003G332401--Sobic003G007500 Sobic001G054200 Sobic001G054200 Sobic003G332401--Sobic001G054200 Sobic003G332401--Sobic002G368400 Sobic003G311700--Sobic003G332401 Sobic001G206000 Sobic001G206000 Sobic003G311700--Sobic001G206000 Sobic004G222600 Sobic004G222600 Sobic003G311700--Sobic004G222600 Sobic003G311700--Sobic001G309500 Sobic003G311700--Sobic002G368400 Sobic003G311700--Sobic003G116600 Sobic003G311700--Sobic004G339300 Sobic003G311700--Sobic001G367000 Sobic010G204300 Sobic010G204300 Sobic003G311700--Sobic010G204300 Sobic003G389800 Sobic003G389800 Sobic010G217200--Sobic003G389800 Sobic010G217200--Sobic006G254600 Sobic004G015800 Sobic004G015800 Sobic010G217200--Sobic004G015800 Sobic007G115900 Sobic007G115900 Sobic010G217200--Sobic007G115900 Sobic010G217200--Sobic002G378200 Sobic010G217200--Sobic001G522900 Sobic004G013600 Sobic004G013600 Sobic010G217200--Sobic004G013600 Sobic006G092800 Sobic006G092800 Sobic010G217200--Sobic006G092800 Sobic004G316800 Sobic004G316800 Sobic010G217200--Sobic004G316800 Sobic006G254600--Sobic008G165000 Sobic006G254600--Sobic006G092800 Sobic006G254600--Sobic002G378200 Sobic008G192000 Sobic008G192000 Sobic006G254600--Sobic008G192000 Sobic002G084300 Sobic002G084300 Sobic006G254600--Sobic002G084300 Sobic006G254600--Sobic001G522900 Sobic004G231400 Sobic004G231400 Sobic006G254600--Sobic004G231400 Sobic010G071200 Sobic010G071200 Sobic006G254600--Sobic010G071200 Sobic006G254600--Sobic001G085500 Sobic001G522900--Sobic007G115900 Sobic001G522900--Sobic001G054200 Sobic004G072800 Sobic004G072800 Sobic001G522900--Sobic004G072800 Sobic001G522900--Sobic002G378200 Sobic001G522900--Sobic006G254600 Sobic006G258900 Sobic006G258900 Sobic001G522900--Sobic006G258900 Sobic001G522900--Sobic008G165000 Sobic007G118000 Sobic007G118000 Sobic001G522900--Sobic007G118000 Sobic003G071500 Sobic003G071500 Sobic001G522900--Sobic003G071500 Sobic003G167000 Sobic003G167000 Sobic001G013200--Sobic003G167000 Sobic007G048700 Sobic007G048700 Sobic001G013200--Sobic007G048700 Sobic001G035400 Sobic001G035400 Sobic001G013200--Sobic001G035400 Sobic008G014300 Sobic008G014300 Sobic001G013200--Sobic008G014300 Sobic006G203900 Sobic006G203900 Sobic001G013200--Sobic006G203900 Sobic009G112900 Sobic009G112900 Sobic001G013200--Sobic009G112900 Sobic003G131300 Sobic003G131300 Sobic001G013200--Sobic003G131300 Sobic010G197900 Sobic010G197900 Sobic001G013200--Sobic010G197900 Sobic007G003100 Sobic007G003100 Sobic001G013200--Sobic007G003100
Octagon: transcription factors


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