Gene annotation
Transcriptome id Sobic.009G032300.1
Synonym SK11, ATSK11, Sb09g002710
Functional annotation CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
UniProt C5YZI1
Pfam PF07714
Panther DB PTHR24057 PTHR24057:SF15
NCBI CDD -
KEGG Orthology K03083; glycogen synthase kinase 3 beta
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G26751 : shaggy-related kinase 11
RAP-DB (Rice) LOC_Os05g04340.1 : CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
MaizeGDB (Corn) Zm00025a036030 , Zm00025a055301 , Zm00025a035655
Brachypodium KQK07956
Barley HORVU3Hr1G034440.4 , HORVU1Hr1G016490.13 , HORVU1Hr1G016490.12 , HORVU1Hr1G016490.11 , HORVU1Hr1G016490.10 , HORVU1Hr1G016490.15 , HORVU1Hr1G016490.14 , HORVU1Hr1G016490.3 , HORVU1Hr1G016490.5 , HORVU3Hr1G034440.2 , HORVU3Hr1G034440.3 , HORVU3Hr1G034440.1 , HORVU3Hr1G034440.6 , HORVU3Hr1G034440.7 , HORVU3Hr1G034440.5 , HORVU1Hr1G016490.9 , HORVU1Hr1G016490.8 , HORVU1Hr1G016490.2 , HORVU1Hr1G016490.6 , HORVU1Hr1G016490.4 , HORVU4Hr1G079520.3 , HORVU4Hr1G079520.2 , HORVU4Hr1G079520.5 , HORVU4Hr1G079520.4
Wheat TraesCS1A02G077200 , TraesCS1A02G077200 , TraesCS3A02G164200 , TraesCS3A02G164200 , TraesCS1B02G095200 , TraesCS1B02G095200 , TraesCS1D02G079300 , TraesCS3D02G177600 , TraesCS3D02G177600
Populus -


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cDNA sequences
Sobic.009G032300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G264400 CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
2 Sobic.006G130200 expressed protein -
3 Sobic.006G092800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
4 Sobic.010G174800 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
5 Sobic.006G128800 expressed protein -
6 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
7 Sobic.007G115900 SAM domain family protein, expressed -
8 Sobic.001G221100 ubiquitin family protein, putative, expressed K08770: ubiquitin C
9 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
10 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
11 Sobic.004G007300 expressed protein -
12 Sobic.001G085500 NLI interacting factor-like phosphatase, putative, expressed -
13 Sobic.001G235000 appr-1-p processing enzyme family protein, putative, expressed -
14 Sobic.001G127500 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
15 Sobic.004G015800 zinc carboxypeptidase family protein, putative, expressed -
16 Sobic.001G514000 OsFBL10 - F-box domain and LRR containing protein, expressed -
17 Sobic.003G008500 VHS and GAT domain containing protein, expressed -
18 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
19 Sobic.004G345700 TBC domain containing protein, expressed -
20 Sobic.004G263900 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11


Gene co-expression network
sample Sobic009G032300 Sobic009G032300 Sobic010G264400 Sobic010G264400 Sobic009G032300--Sobic010G264400 Sobic006G130200 Sobic006G130200 Sobic009G032300--Sobic006G130200 Sobic006G092800 Sobic006G092800 Sobic009G032300--Sobic006G092800 Sobic010G174800 Sobic010G174800 Sobic009G032300--Sobic010G174800 Sobic006G128800 Sobic006G128800 Sobic009G032300--Sobic006G128800 Sobic002G197100 Sobic002G197100 Sobic009G032300--Sobic002G197100 Sobic007G115900 Sobic007G115900 Sobic009G032300--Sobic007G115900 Sobic001G221100 Sobic001G221100 Sobic009G032300--Sobic001G221100 Sobic007G191100 Sobic007G191100 Sobic009G032300--Sobic007G191100 Sobic010G264400--Sobic009G032300 Sobic010G145900 Sobic010G145900 Sobic010G264400--Sobic010G145900 Sobic004G283000 Sobic004G283000 Sobic010G264400--Sobic004G283000 Sobic003G248500 Sobic003G248500 Sobic010G264400--Sobic003G248500 Sobic010G264400--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic010G264400--Sobic001G514000 Sobic010G264400--Sobic006G128800 Sobic004G007300 Sobic004G007300 Sobic010G264400--Sobic004G007300 Sobic002G157300 Sobic002G157300 Sobic010G264400--Sobic002G157300 Sobic006G130200--Sobic006G128800 Sobic004G218300 Sobic004G218300 Sobic006G130200--Sobic004G218300 Sobic006G130200--Sobic010G174800 Sobic006G130200--Sobic009G032300 Sobic003G398400 Sobic003G398400 Sobic006G130200--Sobic003G398400 Sobic001G425000 Sobic001G425000 Sobic006G130200--Sobic001G425000 Sobic006G130200--Sobic006G092800 Sobic003G336800 Sobic003G336800 Sobic006G130200--Sobic003G336800 Sobic001G235000 Sobic001G235000 Sobic006G130200--Sobic001G235000 Sobic006G092800--Sobic004G007300 Sobic004G345700 Sobic004G345700 Sobic006G092800--Sobic004G345700 Sobic007G088900 Sobic007G088900 Sobic006G092800--Sobic007G088900 Sobic001G056200 Sobic001G056200 Sobic006G092800--Sobic001G056200 Sobic006G092800--Sobic006G128800 Sobic006G092800--Sobic002G197100 Sobic006G254600 Sobic006G254600 Sobic006G092800--Sobic006G254600 Sobic001G408700 Sobic001G408700 Sobic006G092800--Sobic001G408700 Sobic003G437500 Sobic003G437500 Sobic006G092800--Sobic003G437500 Sobic010G174800--Sobic003G248500 Sobic010G174800--Sobic006G128800 Sobic003G185200 Sobic003G185200 Sobic010G174800--Sobic003G185200 Sobic003G359300 Sobic003G359300 Sobic010G174800--Sobic003G359300 Sobic010G174800--Sobic006G130200 Sobic010G174800--Sobic003G336800 Sobic004G263900 Sobic004G263900 Sobic010G174800--Sobic004G263900 Sobic001G390500 Sobic001G390500 Sobic010G174800--Sobic001G390500 Sobic001G028400 Sobic001G028400 Sobic010G174800--Sobic001G028400 Sobic003G205501 Sobic003G205501 Sobic006G128800--Sobic003G205501 Sobic006G128800--Sobic010G174800 Sobic004G349900 Sobic004G349900 Sobic006G128800--Sobic004G349900 Sobic006G128800--Sobic002G157300 Sobic003G261300 Sobic003G261300 Sobic006G128800--Sobic003G261300 Sobic006G128800--Sobic003G248500 Sobic006G128800--Sobic006G130200 Sobic006G128800--Sobic001G514000 Sobic003G008500 Sobic003G008500 Sobic006G128800--Sobic003G008500 Sobic002G197100--Sobic004G007300 Sobic006G173100 Sobic006G173100 Sobic002G197100--Sobic006G173100 Sobic002G197100--Sobic004G345700 Sobic001G176200 Sobic001G176200 Sobic002G197100--Sobic001G176200 Sobic001G090400 Sobic001G090400 Sobic002G197100--Sobic001G090400 Sobic002G197100--Sobic001G425000 Sobic002G197100--Sobic003G248500 Sobic002G197100--Sobic001G514000 Sobic002G370900 Sobic002G370900 Sobic002G197100--Sobic002G370900 Sobic004G316800 Sobic004G316800 Sobic007G115900--Sobic004G316800 Sobic001G522900 Sobic001G522900 Sobic007G115900--Sobic001G522900 Sobic007G115900--Sobic006G092800 Sobic001G043900 Sobic001G043900 Sobic007G115900--Sobic001G043900 Sobic007G115900--Sobic009G032300 Sobic006G258900 Sobic006G258900 Sobic007G115900--Sobic006G258900 Sobic002G378200 Sobic002G378200 Sobic007G115900--Sobic002G378200 Sobic007G115900--Sobic004G007300 Sobic003G211700 Sobic003G211700 Sobic007G115900--Sobic003G211700 Sobic001G039700 Sobic001G039700 Sobic001G221100--Sobic001G039700 Sobic001G221100--Sobic009G032300 Sobic010G042900 Sobic010G042900 Sobic001G221100--Sobic010G042900 Sobic003G145900 Sobic003G145900 Sobic001G221100--Sobic003G145900 Sobic004G027100 Sobic004G027100 Sobic001G221100--Sobic004G027100 Sobic004G034400 Sobic004G034400 Sobic001G221100--Sobic004G034400 Sobic004G330900 Sobic004G330900 Sobic001G221100--Sobic004G330900 Sobic005G014950 Sobic005G014950 Sobic001G221100--Sobic005G014950 Sobic001G221100--Sobic002G197100 Sobic004G061900 Sobic004G061900 Sobic007G191100--Sobic004G061900 Sobic002G076400 Sobic002G076400 Sobic007G191100--Sobic002G076400 Sobic008G034600 Sobic008G034600 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic010G263800 Sobic010G263800 Sobic007G191100--Sobic010G263800 Sobic007G011400 Sobic007G011400 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic003G093600 Sobic003G093600 Sobic007G191100--Sobic003G093600 Sobic008G117200 Sobic008G117200 Sobic007G191100--Sobic008G117200
Octagon: transcription factors


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