Gene annotation
Transcriptome id Sobic.001G127500.2,Sobic.001G127500.1
Synonym ATATH9, ATH9, Sb01g011170
Functional annotation ABC1 family domain containing protein, putative, expressed
UniProt C5WNW2 , A0A1B6QIQ3
Pfam PF03109
Panther DB PTHR10566 PTHR10566:SF58
NCBI CDD KOG1235; Predicted unusual protein kinase
KEGG Orthology K08869; ADCK, aarF domain-containing kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40090 : ABC2 homolog 9
RAP-DB (Rice) LOC_Os11g34750.1 : ABC1 family domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a017065
Brachypodium KQK13676
Barley HORVU4Hr1G005730.11 , HORVU4Hr1G005730.10 , HORVU2Hr1G048810.1 , HORVU4Hr1G005730.7 , HORVU4Hr1G005730.6 , HORVU4Hr1G005730.5 , HORVU4Hr1G005730.4 , HORVU4Hr1G005730.3 , HORVU4Hr1G005730.2 , HORVU4Hr1G005730.1 , HORVU4Hr1G005730.9 , HORVU4Hr1G005730.8
Wheat TraesCS4B02G035800 , TraesCS4B02G035800 , TraesCS4D02G034000 , TraesCS4D02G034000 , TraesCS4A02G277100 , TraesCS4A02G277100
Populus -


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cDNA sequences
Sobic.001G127500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G007300 expressed protein -
2 Sobic.006G092800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
3 Sobic.004G345700 TBC domain containing protein, expressed -
4 Sobic.001G085500 NLI interacting factor-like phosphatase, putative, expressed -
5 Sobic.009G032300 CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
6 Sobic.004G015800 zinc carboxypeptidase family protein, putative, expressed -
7 Sobic.004G067700 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
8 Sobic.006G128800 expressed protein -
9 Sobic.004G263900 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
10 Sobic.001G056200 expressed protein -
11 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
12 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
13 Sobic.008G129100 expressed protein -
14 Sobic.005G154500 OsFBX407 - F-box domain containing protein, expressed -
15 Sobic.006G082900 expressed protein -
16 Sobic.003G398400 expressed protein -
17 Sobic.001G235000 appr-1-p processing enzyme family protein, putative, expressed -
18 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
19 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
20 Sobic.006G130200 expressed protein -


Gene co-expression network
sample Sobic001G127500 Sobic001G127500 Sobic004G007300 Sobic004G007300 Sobic001G127500--Sobic004G007300 Sobic006G092800 Sobic006G092800 Sobic001G127500--Sobic006G092800 Sobic004G345700 Sobic004G345700 Sobic001G127500--Sobic004G345700 Sobic001G085500 Sobic001G085500 Sobic001G127500--Sobic001G085500 Sobic009G032300 Sobic009G032300 Sobic001G127500--Sobic009G032300 Sobic004G015800 Sobic004G015800 Sobic001G127500--Sobic004G015800 Sobic004G067700 Sobic004G067700 Sobic001G127500--Sobic004G067700 Sobic006G128800 Sobic006G128800 Sobic001G127500--Sobic006G128800 Sobic004G263900 Sobic004G263900 Sobic001G127500--Sobic004G263900 Sobic002G197100 Sobic002G197100 Sobic004G007300--Sobic002G197100 Sobic001G408700 Sobic001G408700 Sobic004G007300--Sobic001G408700 Sobic004G007300--Sobic004G345700 Sobic004G007300--Sobic006G092800 Sobic004G350100 Sobic004G350100 Sobic004G007300--Sobic004G350100 Sobic006G173100 Sobic006G173100 Sobic004G007300--Sobic006G173100 Sobic004G283000 Sobic004G283000 Sobic004G007300--Sobic004G283000 Sobic008G129100 Sobic008G129100 Sobic004G007300--Sobic008G129100 Sobic001G056200 Sobic001G056200 Sobic004G007300--Sobic001G056200 Sobic006G092800--Sobic004G007300 Sobic006G092800--Sobic004G345700 Sobic007G088900 Sobic007G088900 Sobic006G092800--Sobic007G088900 Sobic006G092800--Sobic001G056200 Sobic006G092800--Sobic006G128800 Sobic006G092800--Sobic002G197100 Sobic006G254600 Sobic006G254600 Sobic006G092800--Sobic006G254600 Sobic006G092800--Sobic001G408700 Sobic003G437500 Sobic003G437500 Sobic006G092800--Sobic003G437500 Sobic004G345700--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic004G345700--Sobic001G514000 Sobic004G345700--Sobic004G007300 Sobic004G345700--Sobic001G408700 Sobic005G154500 Sobic005G154500 Sobic004G345700--Sobic005G154500 Sobic001G176200 Sobic001G176200 Sobic004G345700--Sobic001G176200 Sobic004G345700--Sobic006G092800 Sobic003G205501 Sobic003G205501 Sobic004G345700--Sobic003G205501 Sobic010G245000 Sobic010G245000 Sobic004G345700--Sobic010G245000 Sobic002G378200 Sobic002G378200 Sobic001G085500--Sobic002G378200 Sobic001G085500--Sobic004G007300 Sobic001G085500--Sobic006G092800 Sobic004G298300 Sobic004G298300 Sobic001G085500--Sobic004G298300 Sobic001G085500--Sobic009G032300 Sobic001G085500--Sobic001G127500 Sobic008G165000 Sobic008G165000 Sobic001G085500--Sobic008G165000 Sobic001G028400 Sobic001G028400 Sobic001G085500--Sobic001G028400 Sobic004G034400 Sobic004G034400 Sobic001G085500--Sobic004G034400 Sobic010G264400 Sobic010G264400 Sobic009G032300--Sobic010G264400 Sobic006G130200 Sobic006G130200 Sobic009G032300--Sobic006G130200 Sobic009G032300--Sobic006G092800 Sobic010G174800 Sobic010G174800 Sobic009G032300--Sobic010G174800 Sobic009G032300--Sobic006G128800 Sobic009G032300--Sobic002G197100 Sobic007G115900 Sobic007G115900 Sobic009G032300--Sobic007G115900 Sobic001G221100 Sobic001G221100 Sobic009G032300--Sobic001G221100 Sobic007G191100 Sobic007G191100 Sobic009G032300--Sobic007G191100 Sobic001G235000 Sobic001G235000 Sobic004G015800--Sobic001G235000 Sobic004G015800--Sobic001G408700 Sobic004G015800--Sobic004G007300 Sobic004G015800--Sobic006G128800 Sobic004G015800--Sobic004G345700 Sobic004G015800--Sobic006G092800 Sobic004G015800--Sobic001G514000 Sobic004G015800--Sobic010G174800 Sobic006G244300 Sobic006G244300 Sobic004G015800--Sobic006G244300 Sobic001G114000 Sobic001G114000 Sobic004G067700--Sobic001G114000 Sobic004G067700--Sobic006G173100 Sobic002G370900 Sobic002G370900 Sobic004G067700--Sobic002G370900 Sobic001G512700 Sobic001G512700 Sobic004G067700--Sobic001G512700 Sobic007G217000 Sobic007G217000 Sobic004G067700--Sobic007G217000 Sobic009G126400 Sobic009G126400 Sobic004G067700--Sobic009G126400 Sobic005G045300 Sobic005G045300 Sobic004G067700--Sobic005G045300 Sobic003G008500 Sobic003G008500 Sobic004G067700--Sobic003G008500 Sobic002G310200 Sobic002G310200 Sobic004G067700--Sobic002G310200 Sobic006G128800--Sobic003G205501 Sobic006G128800--Sobic010G174800 Sobic004G349900 Sobic004G349900 Sobic006G128800--Sobic004G349900 Sobic002G157300 Sobic002G157300 Sobic006G128800--Sobic002G157300 Sobic003G261300 Sobic003G261300 Sobic006G128800--Sobic003G261300 Sobic003G248500 Sobic003G248500 Sobic006G128800--Sobic003G248500 Sobic006G128800--Sobic006G130200 Sobic006G128800--Sobic001G514000 Sobic006G128800--Sobic003G008500 Sobic010G055500 Sobic010G055500 Sobic004G263900--Sobic010G055500 Sobic010G071200 Sobic010G071200 Sobic004G263900--Sobic010G071200 Sobic004G263900--Sobic001G056200 Sobic003G359300 Sobic003G359300 Sobic004G263900--Sobic003G359300 Sobic008G174300 Sobic008G174300 Sobic004G263900--Sobic008G174300 Sobic007G063200 Sobic007G063200 Sobic004G263900--Sobic007G063200 Sobic010G260500 Sobic010G260500 Sobic004G263900--Sobic010G260500 Sobic004G263900--Sobic001G028400 Sobic002G084300 Sobic002G084300 Sobic004G263900--Sobic002G084300
Octagon: transcription factors


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