Gene annotation
Transcriptome id Sobic.008G129100.1
Synonym Sb08g018150
Functional annotation expressed protein
UniProt C5YPS5
Pfam -
Panther DB PTHR34356 PTHR34356:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56420 : -
RAP-DB (Rice) LOC_Os12g37390.1 : expressed protein
MaizeGDB (Corn) Zm00025a025477
Brachypodium KQJ86338
Barley -
Wheat TraesCS5D02G101000 , TraesCS5A02G088900 , TraesCS5B02G094900
Populus -


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cDNA sequences
Sobic.008G129100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G007300 expressed protein -
2 Sobic.002G388200 LTV1, putative, expressed K14798: protein LTV1
3 Sobic.004G283000 nucleic acid binding protein, putative, expressed -
4 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
5 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
6 Sobic.003G008500 VHS and GAT domain containing protein, expressed -
7 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
8 Sobic.006G082900 expressed protein -
9 Sobic.003G051200 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed K18159: NDUFAF1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
10 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
11 Sobic.006G128800 expressed protein -
12 Sobic.002G370900 OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed K06889: uncharacterized protein
13 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
14 Sobic.003G012500 expressed protein -
15 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
16 Sobic.004G067700 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
17 Sobic.001G514000 OsFBL10 - F-box domain and LRR containing protein, expressed -
18 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
19 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
20 Sobic.003G261300 arginine/serine-rich coiled-coil protein 1, putative, expressed -


Gene co-expression network
sample Sobic008G129100 Sobic008G129100 Sobic004G007300 Sobic004G007300 Sobic008G129100--Sobic004G007300 Sobic002G388200 Sobic002G388200 Sobic008G129100--Sobic002G388200 Sobic004G283000 Sobic004G283000 Sobic008G129100--Sobic004G283000 Sobic006G173100 Sobic006G173100 Sobic008G129100--Sobic006G173100 Sobic003G248500 Sobic003G248500 Sobic008G129100--Sobic003G248500 Sobic003G008500 Sobic003G008500 Sobic008G129100--Sobic003G008500 Sobic002G197100 Sobic002G197100 Sobic008G129100--Sobic002G197100 Sobic006G082900 Sobic006G082900 Sobic008G129100--Sobic006G082900 Sobic003G051200 Sobic003G051200 Sobic008G129100--Sobic003G051200 Sobic004G007300--Sobic002G197100 Sobic001G408700 Sobic001G408700 Sobic004G007300--Sobic001G408700 Sobic004G345700 Sobic004G345700 Sobic004G007300--Sobic004G345700 Sobic006G092800 Sobic006G092800 Sobic004G007300--Sobic006G092800 Sobic004G350100 Sobic004G350100 Sobic004G007300--Sobic004G350100 Sobic004G007300--Sobic006G173100 Sobic004G007300--Sobic004G283000 Sobic004G007300--Sobic008G129100 Sobic001G056200 Sobic001G056200 Sobic004G007300--Sobic001G056200 Sobic002G388200--Sobic004G283000 Sobic009G056800 Sobic009G056800 Sobic002G388200--Sobic009G056800 Sobic002G388200--Sobic006G173100 Sobic003G187400 Sobic003G187400 Sobic002G388200--Sobic003G187400 Sobic001G466700 Sobic001G466700 Sobic002G388200--Sobic001G466700 Sobic007G118200 Sobic007G118200 Sobic002G388200--Sobic007G118200 Sobic008G174300 Sobic008G174300 Sobic002G388200--Sobic008G174300 Sobic002G388200--Sobic008G129100 Sobic003G081000 Sobic003G081000 Sobic002G388200--Sobic003G081000 Sobic004G283000--Sobic003G248500 Sobic004G283000--Sobic002G388200 Sobic004G283000--Sobic004G007300 Sobic004G283000--Sobic004G350100 Sobic004G283000--Sobic008G174300 Sobic004G283000--Sobic007G118200 Sobic009G257800 Sobic009G257800 Sobic004G283000--Sobic009G257800 Sobic004G283000--Sobic006G173100 Sobic002G157300 Sobic002G157300 Sobic004G283000--Sobic002G157300 Sobic001G090400 Sobic001G090400 Sobic006G173100--Sobic001G090400 Sobic006G173100--Sobic002G157300 Sobic006G173100--Sobic003G187400 Sobic006G173100--Sobic002G197100 Sobic004G021100 Sobic004G021100 Sobic006G173100--Sobic004G021100 Sobic006G032400 Sobic006G032400 Sobic006G173100--Sobic006G032400 Sobic001G512700 Sobic001G512700 Sobic006G173100--Sobic001G512700 Sobic004G067700 Sobic004G067700 Sobic006G173100--Sobic004G067700 Sobic002G370900 Sobic002G370900 Sobic006G173100--Sobic002G370900 Sobic003G359300 Sobic003G359300 Sobic003G248500--Sobic003G359300 Sobic003G248500--Sobic004G283000 Sobic010G174800 Sobic010G174800 Sobic003G248500--Sobic010G174800 Sobic001G390500 Sobic001G390500 Sobic003G248500--Sobic001G390500 Sobic003G248500--Sobic002G197100 Sobic003G185200 Sobic003G185200 Sobic003G248500--Sobic003G185200 Sobic002G365100 Sobic002G365100 Sobic003G248500--Sobic002G365100 Sobic003G248500--Sobic003G051200 Sobic006G128800 Sobic006G128800 Sobic003G248500--Sobic006G128800 Sobic003G008500--Sobic002G157300 Sobic003G008500--Sobic006G082900 Sobic003G008500--Sobic002G370900 Sobic003G008500--Sobic004G067700 Sobic003G401000 Sobic003G401000 Sobic003G008500--Sobic003G401000 Sobic001G514000 Sobic001G514000 Sobic003G008500--Sobic001G514000 Sobic003G008500--Sobic006G173100 Sobic006G202200 Sobic006G202200 Sobic003G008500--Sobic006G202200 Sobic003G008500--Sobic006G128800 Sobic002G197100--Sobic004G007300 Sobic002G197100--Sobic006G173100 Sobic002G197100--Sobic004G345700 Sobic001G176200 Sobic001G176200 Sobic002G197100--Sobic001G176200 Sobic002G197100--Sobic001G090400 Sobic001G425000 Sobic001G425000 Sobic002G197100--Sobic001G425000 Sobic002G197100--Sobic003G248500 Sobic002G197100--Sobic001G514000 Sobic002G197100--Sobic002G370900 Sobic006G082900--Sobic002G370900 Sobic006G082900--Sobic003G008500 Sobic006G082900--Sobic006G202200 Sobic006G082900--Sobic004G007300 Sobic006G082900--Sobic004G345700 Sobic008G149800 Sobic008G149800 Sobic006G082900--Sobic008G149800 Sobic006G082900--Sobic006G173100 Sobic006G082900--Sobic003G401000 Sobic006G195700 Sobic006G195700 Sobic006G082900--Sobic006G195700 Sobic003G051200--Sobic003G248500 Sobic003G051200--Sobic004G283000 Sobic003G051200--Sobic001G390500 Sobic002G378200 Sobic002G378200 Sobic003G051200--Sobic002G378200 Sobic007G111100 Sobic007G111100 Sobic003G051200--Sobic007G111100 Sobic003G051200--Sobic002G365100 Sobic003G051200--Sobic002G388200 Sobic001G083600 Sobic001G083600 Sobic003G051200--Sobic001G083600 Sobic001G371200 Sobic001G371200 Sobic003G051200--Sobic001G371200
Octagon: transcription factors


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