Gene annotation
Transcriptome id Sobic.001G085500.1
Synonym
Functional annotation NLI interacting factor-like phosphatase, putative, expressed
UniProt Q8LKU4 , Q8LKU5 , A0A1B6QHY6
Pfam PF03031
Panther DB PTHR12210 PTHR12210:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G26190 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os03g54870.1 : NLI interacting factor-like phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a016779
Brachypodium -
Barley -
Wheat TraesCS5D02G402700 , TraesCS5D02G402700
Populus -


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cDNA sequences
Sobic.001G085500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
2 Sobic.004G007300 expressed protein -
3 Sobic.006G092800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
4 Sobic.004G298300 ELMO/CED-12 family protein, putative, expressed -
5 Sobic.009G032300 CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
6 Sobic.001G127500 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
7 Sobic.008G165000 LSD1 zinc finger domain containing protein, expressed -
8 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
9 Sobic.004G034400 plant-specific domain TIGR01589 family protein, putative, expressed -
10 Sobic.001G056200 expressed protein -
11 Sobic.006G254600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
12 Sobic.002G200100 AGAP000554-PA, putative, expressed -
13 Sobic.002G132300 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
14 Sobic.004G015800 zinc carboxypeptidase family protein, putative, expressed -
15 Sobic.001G522900 expressed protein -
16 Sobic.007G115900 SAM domain family protein, expressed -
17 Sobic.002G084300 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
18 Sobic.002G010300 photoperiodic flowering time gene(PubMedID : 22394582)@casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
19 Sobic.009G054700 macrophage erythroblast attacher, putative, expressed K18624: MAEA, macrophage erythroblast attacher
20 Sobic.004G345700 TBC domain containing protein, expressed -


Gene co-expression network
sample Sobic001G085500 Sobic001G085500 Sobic002G378200 Sobic002G378200 Sobic001G085500--Sobic002G378200 Sobic004G007300 Sobic004G007300 Sobic001G085500--Sobic004G007300 Sobic006G092800 Sobic006G092800 Sobic001G085500--Sobic006G092800 Sobic004G298300 Sobic004G298300 Sobic001G085500--Sobic004G298300 Sobic009G032300 Sobic009G032300 Sobic001G085500--Sobic009G032300 Sobic001G127500 Sobic001G127500 Sobic001G085500--Sobic001G127500 Sobic008G165000 Sobic008G165000 Sobic001G085500--Sobic008G165000 Sobic001G028400 Sobic001G028400 Sobic001G085500--Sobic001G028400 Sobic004G034400 Sobic004G034400 Sobic001G085500--Sobic004G034400 Sobic006G278700 Sobic006G278700 Sobic002G378200--Sobic006G278700 Sobic004G345700 Sobic004G345700 Sobic002G378200--Sobic004G345700 Sobic002G084300 Sobic002G084300 Sobic002G378200--Sobic002G084300 Sobic002G378200--Sobic004G007300 Sobic004G283000 Sobic004G283000 Sobic002G378200--Sobic004G283000 Sobic001G056200 Sobic001G056200 Sobic002G378200--Sobic001G056200 Sobic002G132300 Sobic002G132300 Sobic002G378200--Sobic002G132300 Sobic002G378200--Sobic001G028400 Sobic003G187200 Sobic003G187200 Sobic002G378200--Sobic003G187200 Sobic002G197100 Sobic002G197100 Sobic004G007300--Sobic002G197100 Sobic001G408700 Sobic001G408700 Sobic004G007300--Sobic001G408700 Sobic004G007300--Sobic004G345700 Sobic004G007300--Sobic006G092800 Sobic004G350100 Sobic004G350100 Sobic004G007300--Sobic004G350100 Sobic006G173100 Sobic006G173100 Sobic004G007300--Sobic006G173100 Sobic004G007300--Sobic004G283000 Sobic008G129100 Sobic008G129100 Sobic004G007300--Sobic008G129100 Sobic004G007300--Sobic001G056200 Sobic006G092800--Sobic004G007300 Sobic006G092800--Sobic004G345700 Sobic007G088900 Sobic007G088900 Sobic006G092800--Sobic007G088900 Sobic006G092800--Sobic001G056200 Sobic006G128800 Sobic006G128800 Sobic006G092800--Sobic006G128800 Sobic006G092800--Sobic002G197100 Sobic006G254600 Sobic006G254600 Sobic006G092800--Sobic006G254600 Sobic006G092800--Sobic001G408700 Sobic003G437500 Sobic003G437500 Sobic006G092800--Sobic003G437500 Sobic004G298300--Sobic001G085500 Sobic001G478300 Sobic001G478300 Sobic004G298300--Sobic001G478300 Sobic001G427800 Sobic001G427800 Sobic004G298300--Sobic001G427800 Sobic003G273100 Sobic003G273100 Sobic004G298300--Sobic003G273100 Sobic004G298300--Sobic001G028400 Sobic001G467000 Sobic001G467000 Sobic004G298300--Sobic001G467000 Sobic001G149700 Sobic001G149700 Sobic004G298300--Sobic001G149700 Sobic010G211300 Sobic010G211300 Sobic004G298300--Sobic010G211300 Sobic001G056700 Sobic001G056700 Sobic004G298300--Sobic001G056700 Sobic010G264400 Sobic010G264400 Sobic009G032300--Sobic010G264400 Sobic006G130200 Sobic006G130200 Sobic009G032300--Sobic006G130200 Sobic009G032300--Sobic006G092800 Sobic010G174800 Sobic010G174800 Sobic009G032300--Sobic010G174800 Sobic009G032300--Sobic006G128800 Sobic009G032300--Sobic002G197100 Sobic007G115900 Sobic007G115900 Sobic009G032300--Sobic007G115900 Sobic001G221100 Sobic001G221100 Sobic009G032300--Sobic001G221100 Sobic007G191100 Sobic007G191100 Sobic009G032300--Sobic007G191100 Sobic001G127500--Sobic004G007300 Sobic001G127500--Sobic006G092800 Sobic001G127500--Sobic004G345700 Sobic001G127500--Sobic001G085500 Sobic001G127500--Sobic009G032300 Sobic004G015800 Sobic004G015800 Sobic001G127500--Sobic004G015800 Sobic004G067700 Sobic004G067700 Sobic001G127500--Sobic004G067700 Sobic001G127500--Sobic006G128800 Sobic004G263900 Sobic004G263900 Sobic001G127500--Sobic004G263900 Sobic010G243400 Sobic010G243400 Sobic008G165000--Sobic010G243400 Sobic008G165000--Sobic006G254600 Sobic001G489700 Sobic001G489700 Sobic008G165000--Sobic001G489700 Sobic008G165000--Sobic002G378200 Sobic008G165000--Sobic001G085500 Sobic004G094300 Sobic004G094300 Sobic008G165000--Sobic004G094300 Sobic002G040700 Sobic002G040700 Sobic008G165000--Sobic002G040700 Sobic001G512400 Sobic001G512400 Sobic008G165000--Sobic001G512400 Sobic001G522900 Sobic001G522900 Sobic008G165000--Sobic001G522900 Sobic010G033400 Sobic010G033400 Sobic001G028400--Sobic010G033400 Sobic007G063200 Sobic007G063200 Sobic001G028400--Sobic007G063200 Sobic001G028400--Sobic001G056200 Sobic001G028400--Sobic004G263900 Sobic003G359300 Sobic003G359300 Sobic001G028400--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic001G028400--Sobic007G205000 Sobic001G028400--Sobic003G437500 Sobic007G118200 Sobic007G118200 Sobic001G028400--Sobic007G118200 Sobic001G028400--Sobic010G211300 Sobic010G042900 Sobic010G042900 Sobic004G034400--Sobic010G042900 Sobic002G010300 Sobic002G010300 Sobic004G034400--Sobic002G010300 Sobic009G054700 Sobic009G054700 Sobic004G034400--Sobic009G054700 Sobic006G209500 Sobic006G209500 Sobic004G034400--Sobic006G209500 Sobic009G178600 Sobic009G178600 Sobic004G034400--Sobic009G178600 Sobic004G034400--Sobic001G085500 Sobic004G034400--Sobic001G478300 Sobic004G034400--Sobic002G132300 Sobic004G320000 Sobic004G320000 Sobic004G034400--Sobic004G320000
Octagon: transcription factors


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