Gene annotation
Transcriptome id Sobic.010G217200.2,Sobic.010G217200.1
Synonym Sb10g026330, ATUBC22, UBC22
Functional annotation ubiquitin-conjugating enzyme, putative, expressed
UniProt A0A194YKM1
Pfam PF00179
Panther DB PTHR24067 PTHR24067:SF57
NCBI CDD KOG0423; Ubiquitin-protein ligase
KEGG Orthology K10583; UBE2S, ubiquitin-conjugating enzyme E2 S
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05080 : ubiquitin-conjugating enzyme 22
RAP-DB (Rice) LOC_Os06g45000.1 : ubiquitin-conjugating enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a041993
Brachypodium PNT75393 , PNT75394 , PNT75395 , KQK16943 , KQK16942 , KQK16941 , KQK16940
Barley HORVU7Hr1G110360.6 , HORVU7Hr1G110360.4 , HORVU7Hr1G110360.5 , HORVU7Hr1G110360.2 , HORVU7Hr1G110360.3 , HORVU7Hr1G110360.1
Wheat TraesCS7B02G395100 , TraesCS7D02G477600 , TraesCS7B02G396100 , TraesCS7B02G396100 , TraesCS7A02G491300 , TraesCS7A02G491300 , TraesCS7A02G491300 , TraesCS7A02G491500 , TraesCS6D02G142800 , TraesCS7D02G477900
Populus -


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cDNA sequences
Sobic.010G217200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G389800 nucleotide-sugar transporter family protein, putative, expressed -
2 Sobic.006G254600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
3 Sobic.004G015800 zinc carboxypeptidase family protein, putative, expressed -
4 Sobic.007G115900 SAM domain family protein, expressed -
5 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
6 Sobic.001G522900 expressed protein -
7 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
8 Sobic.006G092800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
9 Sobic.004G316800 RPA1A - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
10 Sobic.007G088900 expressed protein -
11 Sobic.010G074900 G protein coupled receptor, putative, expressed -
12 Sobic.001G226100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
13 Sobic.007G212800 frataxin, putative, expressed K19054: frataxin
14 Sobic.007G205000 zinc finger family protein, putative, expressed -
15 Sobic.002G306400 zinc finger family protein, putative, expressed -
16 Sobic.001G335201 - -
17 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
18 Sobic.001G085500 NLI interacting factor-like phosphatase, putative, expressed -
19 Sobic.001G061700 "similar to BTB/POZ domain containing protein, expressed"(PubMedID : 29862293)@MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.001G056200 expressed protein -


Gene co-expression network
sample Sobic010G217200 Sobic010G217200 Sobic003G389800 Sobic003G389800 Sobic010G217200--Sobic003G389800 Sobic006G254600 Sobic006G254600 Sobic010G217200--Sobic006G254600 Sobic004G015800 Sobic004G015800 Sobic010G217200--Sobic004G015800 Sobic007G115900 Sobic007G115900 Sobic010G217200--Sobic007G115900 Sobic002G378200 Sobic002G378200 Sobic010G217200--Sobic002G378200 Sobic001G522900 Sobic001G522900 Sobic010G217200--Sobic001G522900 Sobic004G013600 Sobic004G013600 Sobic010G217200--Sobic004G013600 Sobic006G092800 Sobic006G092800 Sobic010G217200--Sobic006G092800 Sobic004G316800 Sobic004G316800 Sobic010G217200--Sobic004G316800 Sobic003G389800--Sobic010G217200 Sobic003G389800--Sobic004G013600 Sobic003G389800--Sobic006G092800 Sobic010G074900 Sobic010G074900 Sobic003G389800--Sobic010G074900 Sobic001G056200 Sobic001G056200 Sobic003G389800--Sobic001G056200 Sobic001G049600 Sobic001G049600 Sobic003G389800--Sobic001G049600 Sobic003G389800--Sobic004G015800 Sobic003G389800--Sobic006G254600 Sobic010G174800 Sobic010G174800 Sobic003G389800--Sobic010G174800 Sobic008G165000 Sobic008G165000 Sobic006G254600--Sobic008G165000 Sobic006G254600--Sobic006G092800 Sobic006G254600--Sobic002G378200 Sobic008G192000 Sobic008G192000 Sobic006G254600--Sobic008G192000 Sobic002G084300 Sobic002G084300 Sobic006G254600--Sobic002G084300 Sobic006G254600--Sobic001G522900 Sobic004G231400 Sobic004G231400 Sobic006G254600--Sobic004G231400 Sobic010G071200 Sobic010G071200 Sobic006G254600--Sobic010G071200 Sobic001G085500 Sobic001G085500 Sobic006G254600--Sobic001G085500 Sobic001G235000 Sobic001G235000 Sobic004G015800--Sobic001G235000 Sobic001G408700 Sobic001G408700 Sobic004G015800--Sobic001G408700 Sobic004G007300 Sobic004G007300 Sobic004G015800--Sobic004G007300 Sobic006G128800 Sobic006G128800 Sobic004G015800--Sobic006G128800 Sobic004G345700 Sobic004G345700 Sobic004G015800--Sobic004G345700 Sobic004G015800--Sobic006G092800 Sobic001G514000 Sobic001G514000 Sobic004G015800--Sobic001G514000 Sobic004G015800--Sobic010G174800 Sobic006G244300 Sobic006G244300 Sobic004G015800--Sobic006G244300 Sobic007G115900--Sobic004G316800 Sobic007G115900--Sobic001G522900 Sobic007G115900--Sobic006G092800 Sobic001G043900 Sobic001G043900 Sobic007G115900--Sobic001G043900 Sobic009G032300 Sobic009G032300 Sobic007G115900--Sobic009G032300 Sobic006G258900 Sobic006G258900 Sobic007G115900--Sobic006G258900 Sobic007G115900--Sobic002G378200 Sobic007G115900--Sobic004G007300 Sobic003G211700 Sobic003G211700 Sobic007G115900--Sobic003G211700 Sobic006G278700 Sobic006G278700 Sobic002G378200--Sobic006G278700 Sobic002G378200--Sobic004G345700 Sobic002G378200--Sobic002G084300 Sobic002G378200--Sobic004G007300 Sobic004G283000 Sobic004G283000 Sobic002G378200--Sobic004G283000 Sobic002G378200--Sobic001G056200 Sobic002G132300 Sobic002G132300 Sobic002G378200--Sobic002G132300 Sobic001G028400 Sobic001G028400 Sobic002G378200--Sobic001G028400 Sobic003G187200 Sobic003G187200 Sobic002G378200--Sobic003G187200 Sobic001G522900--Sobic007G115900 Sobic001G054200 Sobic001G054200 Sobic001G522900--Sobic001G054200 Sobic004G072800 Sobic004G072800 Sobic001G522900--Sobic004G072800 Sobic001G522900--Sobic002G378200 Sobic001G522900--Sobic006G254600 Sobic001G522900--Sobic006G258900 Sobic001G522900--Sobic008G165000 Sobic007G118000 Sobic007G118000 Sobic001G522900--Sobic007G118000 Sobic003G071500 Sobic003G071500 Sobic001G522900--Sobic003G071500 Sobic004G013600--Sobic001G056200 Sobic004G013600--Sobic001G028400 Sobic003G354100 Sobic003G354100 Sobic004G013600--Sobic003G354100 Sobic010G211300 Sobic010G211300 Sobic004G013600--Sobic010G211300 Sobic006G248500 Sobic006G248500 Sobic004G013600--Sobic006G248500 Sobic007G205000 Sobic007G205000 Sobic004G013600--Sobic007G205000 Sobic009G030300 Sobic009G030300 Sobic004G013600--Sobic009G030300 Sobic003G437500 Sobic003G437500 Sobic004G013600--Sobic003G437500 Sobic007G118200 Sobic007G118200 Sobic004G013600--Sobic007G118200 Sobic006G092800--Sobic004G007300 Sobic006G092800--Sobic004G345700 Sobic007G088900 Sobic007G088900 Sobic006G092800--Sobic007G088900 Sobic006G092800--Sobic001G056200 Sobic006G092800--Sobic006G128800 Sobic002G197100 Sobic002G197100 Sobic006G092800--Sobic002G197100 Sobic006G092800--Sobic006G254600 Sobic006G092800--Sobic001G408700 Sobic006G092800--Sobic003G437500 Sobic004G316800--Sobic007G115900 Sobic004G316800--Sobic003G211700 Sobic004G316800--Sobic001G522900 Sobic004G316800--Sobic006G092800 Sobic004G316800--Sobic006G258900 Sobic004G316800--Sobic002G378200 Sobic003G374000 Sobic003G374000 Sobic004G316800--Sobic003G374000 Sobic004G316800--Sobic010G074900 Sobic004G316800--Sobic004G007300
Octagon: transcription factors


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