Gene annotation
Transcriptome id Sobic.001G061700.1
Synonym Sb01g005590, ATBPM4, BPM4
Functional annotation "similar to BTB/POZ domain containing protein, expressed" (PubMedID : 29862293)
MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt C5WY31
Pfam PF00651
Panther DB PTHR24411 PTHR24411:SF35
NCBI CDD KOG1987; Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G03740 : BTB-POZ and MATH domain 4
RAP-DB (Rice) LOC_Os03g57854.1 : MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) Zm00025a016593 , Zm00025a016268 , Zm00025a008515 , Zm00025a045098 , Zm00025a048987 , Zm00025a015333
Brachypodium KQK20728 , KQK14903 , KQK20727 , KQK12802 , PNT73989
Barley HORVU2Hr1G023850.1 , HORVU2Hr1G055140.1 , HORVU2Hr1G055140.2 , HORVU5Hr1G104190.1
Wheat TraesCS2A02G135800 , TraesCS5D02G437400 , TraesCS2B02G159700 , TraesCS2D02G138300 , TraesCS2A02G237800 , TraesCS2B02G262200 , TraesCS2B02G262200 , TraesCS2D02G246900 , TraesCS5A02G429400 , TraesCS5A02G429400 , TraesCS5B02G431400 , TraesCS5B02G431400
Populus PNT42079


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cDNA sequences
Sobic.001G061700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
2 Sobic.002G272600 TBC domain containing protein, expressed -
3 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
4 Sobic.007G205000 zinc finger family protein, putative, expressed -
5 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
6 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
7 Sobic.003G273500 expressed protein -
8 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
9 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
10 Sobic.002G040700 tetratricopeptide repeat, putative, expressed -
11 Sobic.005G000800 FGFR1 oncogene partner, putative, expressed K16546: FGFR1 oncogene partner
12 Sobic.008G139700 bromodomain associated family protein, expressed K14649: transcription initiation factor TFIID subunit 8
13 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
14 Sobic.006G257001 - -
15 Sobic.001G430800 GA17271-PA, putative, expressed -
16 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.007G097900 OsFBL45 - F-box domain and LRR containing protein, expressed -
18 Sobic.007G019800 expressed protein -
19 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
20 Sobic.001G105100 neighbor of COX4, putative, expressed -


Gene co-expression network
sample Sobic001G061700 Sobic001G061700 Sobic004G059000 Sobic004G059000 Sobic001G061700--Sobic004G059000 Sobic002G272600 Sobic002G272600 Sobic001G061700--Sobic002G272600 Sobic003G350600 Sobic003G350600 Sobic001G061700--Sobic003G350600 Sobic007G205000 Sobic007G205000 Sobic001G061700--Sobic007G205000 Sobic002G365100 Sobic002G365100 Sobic001G061700--Sobic002G365100 Sobic010G105600 Sobic010G105600 Sobic001G061700--Sobic010G105600 Sobic003G273500 Sobic003G273500 Sobic001G061700--Sobic003G273500 Sobic001G028400 Sobic001G028400 Sobic001G061700--Sobic001G028400 Sobic002G378200 Sobic002G378200 Sobic001G061700--Sobic002G378200 Sobic004G305600 Sobic004G305600 Sobic004G059000--Sobic004G305600 Sobic004G059000--Sobic001G061700 Sobic003G250500 Sobic003G250500 Sobic004G059000--Sobic003G250500 Sobic007G019800 Sobic007G019800 Sobic004G059000--Sobic007G019800 Sobic004G253000 Sobic004G253000 Sobic004G059000--Sobic004G253000 Sobic001G131800 Sobic001G131800 Sobic004G059000--Sobic001G131800 Sobic002G256300 Sobic002G256300 Sobic004G059000--Sobic002G256300 Sobic004G059000--Sobic002G365100 Sobic003G405700 Sobic003G405700 Sobic004G059000--Sobic003G405700 Sobic002G272600--Sobic001G061700 Sobic001G080000 Sobic001G080000 Sobic002G272600--Sobic001G080000 Sobic001G143500 Sobic001G143500 Sobic002G272600--Sobic001G143500 Sobic002G272600--Sobic003G405700 Sobic002G272600--Sobic010G105600 Sobic002G272600--Sobic007G205000 Sobic003G038600 Sobic003G038600 Sobic002G272600--Sobic003G038600 Sobic002G272600--Sobic003G350600 Sobic010G219100 Sobic010G219100 Sobic002G272600--Sobic010G219100 Sobic004G072800 Sobic004G072800 Sobic003G350600--Sobic004G072800 Sobic001G512600 Sobic001G512600 Sobic003G350600--Sobic001G512600 Sobic003G007500 Sobic003G007500 Sobic003G350600--Sobic003G007500 Sobic008G142700 Sobic008G142700 Sobic003G350600--Sobic008G142700 Sobic003G226500 Sobic003G226500 Sobic003G350600--Sobic003G226500 Sobic001G427800 Sobic001G427800 Sobic003G350600--Sobic001G427800 Sobic009G232400 Sobic009G232400 Sobic003G350600--Sobic009G232400 Sobic003G350600--Sobic001G061700 Sobic001G067900 Sobic001G067900 Sobic003G350600--Sobic001G067900 Sobic007G205000--Sobic001G028400 Sobic006G278700 Sobic006G278700 Sobic007G205000--Sobic006G278700 Sobic007G118200 Sobic007G118200 Sobic007G205000--Sobic007G118200 Sobic009G198100 Sobic009G198100 Sobic007G205000--Sobic009G198100 Sobic010G033400 Sobic010G033400 Sobic007G205000--Sobic010G033400 Sobic004G013600 Sobic004G013600 Sobic007G205000--Sobic004G013600 Sobic006G267300 Sobic006G267300 Sobic007G205000--Sobic006G267300 Sobic001G010600 Sobic001G010600 Sobic007G205000--Sobic001G010600 Sobic004G350100 Sobic004G350100 Sobic007G205000--Sobic004G350100 Sobic003G185200 Sobic003G185200 Sobic002G365100--Sobic003G185200 Sobic003G261300 Sobic003G261300 Sobic002G365100--Sobic003G261300 Sobic003G248500 Sobic003G248500 Sobic002G365100--Sobic003G248500 Sobic003G359300 Sobic003G359300 Sobic002G365100--Sobic003G359300 Sobic004G246700 Sobic004G246700 Sobic002G365100--Sobic004G246700 Sobic010G055500 Sobic010G055500 Sobic002G365100--Sobic010G055500 Sobic010G174800 Sobic010G174800 Sobic002G365100--Sobic010G174800 Sobic002G365100--Sobic001G028400 Sobic006G128800 Sobic006G128800 Sobic002G365100--Sobic006G128800 Sobic001G237500 Sobic001G237500 Sobic010G105600--Sobic001G237500 Sobic001G105100 Sobic001G105100 Sobic010G105600--Sobic001G105100 Sobic010G105600--Sobic003G405700 Sobic010G105600--Sobic001G067900 Sobic003G400100 Sobic003G400100 Sobic010G105600--Sobic003G400100 Sobic006G257001 Sobic006G257001 Sobic010G105600--Sobic006G257001 Sobic010G105600--Sobic002G272600 Sobic010G105600--Sobic001G061700 Sobic006G034800 Sobic006G034800 Sobic010G105600--Sobic006G034800 Sobic003G187200 Sobic003G187200 Sobic003G273500--Sobic003G187200 Sobic004G286500 Sobic004G286500 Sobic003G273500--Sobic004G286500 Sobic004G323700 Sobic004G323700 Sobic003G273500--Sobic004G323700 Sobic003G273500--Sobic001G061700 Sobic006G163800 Sobic006G163800 Sobic003G273500--Sobic006G163800 Sobic004G226600 Sobic004G226600 Sobic003G273500--Sobic004G226600 Sobic006G008600 Sobic006G008600 Sobic003G273500--Sobic006G008600 Sobic003G119700 Sobic003G119700 Sobic003G273500--Sobic003G119700 Sobic010G074900 Sobic010G074900 Sobic003G273500--Sobic010G074900 Sobic001G028400--Sobic010G033400 Sobic007G063200 Sobic007G063200 Sobic001G028400--Sobic007G063200 Sobic001G056200 Sobic001G056200 Sobic001G028400--Sobic001G056200 Sobic004G263900 Sobic004G263900 Sobic001G028400--Sobic004G263900 Sobic001G028400--Sobic003G359300 Sobic001G028400--Sobic007G205000 Sobic003G437500 Sobic003G437500 Sobic001G028400--Sobic003G437500 Sobic001G028400--Sobic007G118200 Sobic010G211300 Sobic010G211300 Sobic001G028400--Sobic010G211300 Sobic002G378200--Sobic006G278700 Sobic004G345700 Sobic004G345700 Sobic002G378200--Sobic004G345700 Sobic002G084300 Sobic002G084300 Sobic002G378200--Sobic002G084300 Sobic004G007300 Sobic004G007300 Sobic002G378200--Sobic004G007300 Sobic004G283000 Sobic004G283000 Sobic002G378200--Sobic004G283000 Sobic002G378200--Sobic001G056200 Sobic002G132300 Sobic002G132300 Sobic002G378200--Sobic002G132300 Sobic002G378200--Sobic001G028400 Sobic002G378200--Sobic003G187200
Octagon: transcription factors


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