Gene annotation
Transcriptome id Sobic.001G430800.1
Synonym Sb01g040520
Functional annotation GA17271-PA, putative, expressed
UniProt C5WQS4
Pfam -
Panther DB PTHR13677 PTHR13677:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73930 : -
RAP-DB (Rice) LOC_Os03g15390.1 : GA17271-PA, putative, expressed
MaizeGDB (Corn) Zm00025a001678
Brachypodium KQK22488
Barley HORVU4Hr1G061880.3 , HORVU4Hr1G061880.2 , HORVU4Hr1G061880.1 , HORVU4Hr1G061880.7 , HORVU4Hr1G061880.6 , HORVU4Hr1G061880.5 , HORVU4Hr1G061880.4 , HORVU4Hr1G061880.9 , HORVU4Hr1G061880.8 , HORVU4Hr1G061880.13 , HORVU4Hr1G061880.12 , HORVU4Hr1G061880.11 , HORVU4Hr1G061880.10 , HORVU4Hr1G061880.14 , HORVU5Hr1G014950.1 , HORVU6Hr1G071470.1
Wheat TraesCS4B02G217900 , TraesCS4D02G218200 , TraesCS4A02G086500
Populus -


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cDNA sequences
Sobic.001G430800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G129000 RING zinc finger protein, putative, expressed -
2 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
3 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
4 Sobic.009G050700 importin subunit alpha, putative, expressed -
5 Sobic.006G194500 expressed protein -
6 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
7 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
8 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
9 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
10 Sobic.001G061700 "similar to BTB/POZ domain containing protein, expressed"(PubMedID : 29862293)@MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.006G183000 RING zinc finger protein, putative, expressed -
12 Sobic.007G097900 OsFBL45 - F-box domain and LRR containing protein, expressed -
13 Sobic.007G019800 expressed protein -
14 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
15 Sobic.008G142700 expressed protein -
16 Sobic.001G078500 expressed protein -
17 Sobic.004G072800 expressed protein -
18 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
19 Sobic.001G085100 expressed protein -
20 Sobic.008G192000 yippee zinc-binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G430800 Sobic001G430800 Sobic002G129000 Sobic002G129000 Sobic001G430800--Sobic002G129000 Sobic003G350600 Sobic003G350600 Sobic001G430800--Sobic003G350600 Sobic001G138300 Sobic001G138300 Sobic001G430800--Sobic001G138300 Sobic009G050700 Sobic009G050700 Sobic001G430800--Sobic009G050700 Sobic006G194500 Sobic006G194500 Sobic001G430800--Sobic006G194500 Sobic004G059000 Sobic004G059000 Sobic001G430800--Sobic004G059000 Sobic003G007500 Sobic003G007500 Sobic001G430800--Sobic003G007500 Sobic006G263900 Sobic006G263900 Sobic001G430800--Sobic006G263900 Sobic010G055500 Sobic010G055500 Sobic001G430800--Sobic010G055500 Sobic006G183000 Sobic006G183000 Sobic002G129000--Sobic006G183000 Sobic001G439600 Sobic001G439600 Sobic002G129000--Sobic001G439600 Sobic002G129000--Sobic009G050700 Sobic001G294900 Sobic001G294900 Sobic002G129000--Sobic001G294900 Sobic002G400000 Sobic002G400000 Sobic002G129000--Sobic002G400000 Sobic010G168600 Sobic010G168600 Sobic002G129000--Sobic010G168600 Sobic001G136900 Sobic001G136900 Sobic002G129000--Sobic001G136900 Sobic002G129000--Sobic006G263900 Sobic003G405700 Sobic003G405700 Sobic002G129000--Sobic003G405700 Sobic004G072800 Sobic004G072800 Sobic003G350600--Sobic004G072800 Sobic001G512600 Sobic001G512600 Sobic003G350600--Sobic001G512600 Sobic003G350600--Sobic003G007500 Sobic008G142700 Sobic008G142700 Sobic003G350600--Sobic008G142700 Sobic003G226500 Sobic003G226500 Sobic003G350600--Sobic003G226500 Sobic001G427800 Sobic001G427800 Sobic003G350600--Sobic001G427800 Sobic009G232400 Sobic009G232400 Sobic003G350600--Sobic009G232400 Sobic001G061700 Sobic001G061700 Sobic003G350600--Sobic001G061700 Sobic001G067900 Sobic001G067900 Sobic003G350600--Sobic001G067900 Sobic004G079100 Sobic004G079100 Sobic001G138300--Sobic004G079100 Sobic001G138300--Sobic003G350600 Sobic001G138300--Sobic001G430800 Sobic004G231400 Sobic004G231400 Sobic001G138300--Sobic004G231400 Sobic001G054200 Sobic001G054200 Sobic001G138300--Sobic001G054200 Sobic006G212100 Sobic006G212100 Sobic001G138300--Sobic006G212100 Sobic001G441600 Sobic001G441600 Sobic001G138300--Sobic001G441600 Sobic001G138300--Sobic006G263900 Sobic001G138300--Sobic002G129000 Sobic009G050700--Sobic002G129000 Sobic009G050700--Sobic006G183000 Sobic009G050700--Sobic003G405700 Sobic006G278700 Sobic006G278700 Sobic009G050700--Sobic006G278700 Sobic006G101700 Sobic006G101700 Sobic009G050700--Sobic006G101700 Sobic004G356900 Sobic004G356900 Sobic009G050700--Sobic004G356900 Sobic006G225300 Sobic006G225300 Sobic009G050700--Sobic006G225300 Sobic009G050700--Sobic003G226500 Sobic001G085100 Sobic001G085100 Sobic009G050700--Sobic001G085100 Sobic001G323000 Sobic001G323000 Sobic006G194500--Sobic001G323000 Sobic009G228700 Sobic009G228700 Sobic006G194500--Sobic009G228700 Sobic010G130000 Sobic010G130000 Sobic006G194500--Sobic010G130000 Sobic009G138100 Sobic009G138100 Sobic006G194500--Sobic009G138100 Sobic002G352600 Sobic002G352600 Sobic006G194500--Sobic002G352600 Sobic006G148200 Sobic006G148200 Sobic006G194500--Sobic006G148200 Sobic001G466700 Sobic001G466700 Sobic006G194500--Sobic001G466700 Sobic002G418700 Sobic002G418700 Sobic006G194500--Sobic002G418700 Sobic006G249700 Sobic006G249700 Sobic006G194500--Sobic006G249700 Sobic004G305600 Sobic004G305600 Sobic004G059000--Sobic004G305600 Sobic004G059000--Sobic001G061700 Sobic003G250500 Sobic003G250500 Sobic004G059000--Sobic003G250500 Sobic007G019800 Sobic007G019800 Sobic004G059000--Sobic007G019800 Sobic004G253000 Sobic004G253000 Sobic004G059000--Sobic004G253000 Sobic001G131800 Sobic001G131800 Sobic004G059000--Sobic001G131800 Sobic002G256300 Sobic002G256300 Sobic004G059000--Sobic002G256300 Sobic002G365100 Sobic002G365100 Sobic004G059000--Sobic002G365100 Sobic004G059000--Sobic003G405700 Sobic007G186300 Sobic007G186300 Sobic003G007500--Sobic007G186300 Sobic010G083700 Sobic010G083700 Sobic003G007500--Sobic010G083700 Sobic003G007500--Sobic010G168600 Sobic001G078500 Sobic001G078500 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic003G007500--Sobic004G072800 Sobic004G104900 Sobic004G104900 Sobic003G007500--Sobic004G104900 Sobic002G281300 Sobic002G281300 Sobic003G007500--Sobic002G281300 Sobic006G263900--Sobic010G083700 Sobic006G263900--Sobic001G054200 Sobic006G263900--Sobic010G168600 Sobic001G395400 Sobic001G395400 Sobic006G263900--Sobic001G395400 Sobic006G263900--Sobic001G078500 Sobic006G263900--Sobic006G212100 Sobic010G253800 Sobic010G253800 Sobic006G263900--Sobic010G253800 Sobic009G246950 Sobic009G246950 Sobic006G263900--Sobic009G246950 Sobic006G263900--Sobic003G007500 Sobic010G071200 Sobic010G071200 Sobic010G055500--Sobic010G071200 Sobic004G263900 Sobic004G263900 Sobic010G055500--Sobic004G263900 Sobic001G149700 Sobic001G149700 Sobic010G055500--Sobic001G149700 Sobic010G055500--Sobic004G231400 Sobic001G512900 Sobic001G512900 Sobic010G055500--Sobic001G512900 Sobic006G109300 Sobic006G109300 Sobic010G055500--Sobic006G109300 Sobic001G390500 Sobic001G390500 Sobic010G055500--Sobic001G390500 Sobic010G055500--Sobic008G142700 Sobic004G150400 Sobic004G150400 Sobic010G055500--Sobic004G150400
Octagon: transcription factors


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