Gene annotation
Transcriptome id Sobic.003G273500.1
Synonym Sb03g032550
Functional annotation expressed protein
UniProt C5XHN7
Pfam PF05653
Panther DB PTHR12570 PTHR12570:SF12
NCBI CDD KOG2922; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015693magnesium ion transport GO:0015095magnesium ion transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT5G11960 : Protein of unknown function (DUF803)
RAP-DB (Rice) LOC_Os01g51190.1 : expressed protein
MaizeGDB (Corn) Zm00025a027836
Brachypodium KQK09414 , KQK09413
Barley -
Wheat TraesCS3A02G251700 , TraesCS3D02G252100 , TraesCS3B02G281200 , TraesCS3D02G252100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G187200 phox domain-containing protein, putative, expressed -
2 Sobic.004G286500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
3 Sobic.004G323700 zinc finger family protein, putative, expressed -
4 Sobic.001G061700 "similar to BTB/POZ domain containing protein, expressed"(PubMedID : 29862293)@MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
5 Sobic.006G163800 diacylglycerol kinase, putative, expressed -
6 Sobic.004G226600 expressed protein -
7 Sobic.006G008600 zinc finger family protein, putative, expressed -
8 Sobic.003G119700 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.010G074900 G protein coupled receptor, putative, expressed -
10 Sobic.003G205501 - -
11 Sobic.005G180700 zinc finger, C3HC4 type family protein, expressed -
12 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
13 Sobic.002G040700 tetratricopeptide repeat, putative, expressed -
14 Sobic.001G105500 heat shock protein DnaJ, putative, expressed -
15 Sobic.009G226400 dynamin family protein, putative, expressed -
16 Sobic.002G084300 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
17 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
18 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
19 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
20 Sobic.001G193100 expressed protein -


Gene co-expression network
sample Sobic003G273500 Sobic003G273500 Sobic003G187200 Sobic003G187200 Sobic003G273500--Sobic003G187200 Sobic004G286500 Sobic004G286500 Sobic003G273500--Sobic004G286500 Sobic004G323700 Sobic004G323700 Sobic003G273500--Sobic004G323700 Sobic001G061700 Sobic001G061700 Sobic003G273500--Sobic001G061700 Sobic006G163800 Sobic006G163800 Sobic003G273500--Sobic006G163800 Sobic004G226600 Sobic004G226600 Sobic003G273500--Sobic004G226600 Sobic006G008600 Sobic006G008600 Sobic003G273500--Sobic006G008600 Sobic003G119700 Sobic003G119700 Sobic003G273500--Sobic003G119700 Sobic010G074900 Sobic010G074900 Sobic003G273500--Sobic010G074900 Sobic010G204400 Sobic010G204400 Sobic003G187200--Sobic010G204400 Sobic004G345700 Sobic004G345700 Sobic003G187200--Sobic004G345700 Sobic004G039600 Sobic004G039600 Sobic003G187200--Sobic004G039600 Sobic007G132100 Sobic007G132100 Sobic003G187200--Sobic007G132100 Sobic006G195700 Sobic006G195700 Sobic003G187200--Sobic006G195700 Sobic003G187200--Sobic006G163800 Sobic002G378200 Sobic002G378200 Sobic003G187200--Sobic002G378200 Sobic003G187500 Sobic003G187500 Sobic003G187200--Sobic003G187500 Sobic010G053800 Sobic010G053800 Sobic003G187200--Sobic010G053800 Sobic001G515000 Sobic001G515000 Sobic004G286500--Sobic001G515000 Sobic008G046500 Sobic008G046500 Sobic004G286500--Sobic008G046500 Sobic004G286500--Sobic006G163800 Sobic004G286500--Sobic003G187200 Sobic004G286500--Sobic010G053800 Sobic001G143500 Sobic001G143500 Sobic004G286500--Sobic001G143500 Sobic007G027700 Sobic007G027700 Sobic004G286500--Sobic007G027700 Sobic006G012500 Sobic006G012500 Sobic004G286500--Sobic006G012500 Sobic001G094900 Sobic001G094900 Sobic004G286500--Sobic001G094900 Sobic002G117400 Sobic002G117400 Sobic004G323700--Sobic002G117400 Sobic007G218000 Sobic007G218000 Sobic004G323700--Sobic007G218000 Sobic002G303600 Sobic002G303600 Sobic004G323700--Sobic002G303600 Sobic010G261600 Sobic010G261600 Sobic004G323700--Sobic010G261600 Sobic004G228800 Sobic004G228800 Sobic004G323700--Sobic004G228800 Sobic010G278200 Sobic010G278200 Sobic004G323700--Sobic010G278200 Sobic006G174850 Sobic006G174850 Sobic004G323700--Sobic006G174850 Sobic006G131000 Sobic006G131000 Sobic004G323700--Sobic006G131000 Sobic004G323700--Sobic004G039600 Sobic004G059000 Sobic004G059000 Sobic001G061700--Sobic004G059000 Sobic002G272600 Sobic002G272600 Sobic001G061700--Sobic002G272600 Sobic003G350600 Sobic003G350600 Sobic001G061700--Sobic003G350600 Sobic007G205000 Sobic007G205000 Sobic001G061700--Sobic007G205000 Sobic002G365100 Sobic002G365100 Sobic001G061700--Sobic002G365100 Sobic010G105600 Sobic010G105600 Sobic001G061700--Sobic010G105600 Sobic001G061700--Sobic003G273500 Sobic001G028400 Sobic001G028400 Sobic001G061700--Sobic001G028400 Sobic001G061700--Sobic002G378200 Sobic006G163800--Sobic010G204400 Sobic001G369000 Sobic001G369000 Sobic006G163800--Sobic001G369000 Sobic006G163800--Sobic006G131000 Sobic006G163800--Sobic010G053800 Sobic006G163800--Sobic007G218000 Sobic010G275500 Sobic010G275500 Sobic006G163800--Sobic010G275500 Sobic006G163800--Sobic006G012500 Sobic006G163800--Sobic004G039600 Sobic004G146500 Sobic004G146500 Sobic006G163800--Sobic004G146500 Sobic004G226600--Sobic004G286500 Sobic010G249100 Sobic010G249100 Sobic004G226600--Sobic010G249100 Sobic004G226600--Sobic003G273500 Sobic004G226600--Sobic003G187200 Sobic007G118200 Sobic007G118200 Sobic004G226600--Sobic007G118200 Sobic003G289400 Sobic003G289400 Sobic004G226600--Sobic003G289400 Sobic004G226600--Sobic010G204400 Sobic001G425800 Sobic001G425800 Sobic004G226600--Sobic001G425800 Sobic004G226600--Sobic006G163800 Sobic006G008600--Sobic007G218000 Sobic001G392300 Sobic001G392300 Sobic006G008600--Sobic001G392300 Sobic006G008600--Sobic006G012500 Sobic006G008600--Sobic006G163800 Sobic002G297200 Sobic002G297200 Sobic006G008600--Sobic002G297200 Sobic004G084300 Sobic004G084300 Sobic006G008600--Sobic004G084300 Sobic002G264200 Sobic002G264200 Sobic006G008600--Sobic002G264200 Sobic006G008600--Sobic004G146500 Sobic008G047800 Sobic008G047800 Sobic006G008600--Sobic008G047800 Sobic008G124900 Sobic008G124900 Sobic003G119700--Sobic008G124900 Sobic001G294300 Sobic001G294300 Sobic003G119700--Sobic001G294300 Sobic003G119700--Sobic006G131000 Sobic007G093800 Sobic007G093800 Sobic003G119700--Sobic007G093800 Sobic001G441400 Sobic001G441400 Sobic003G119700--Sobic001G441400 Sobic001G096000 Sobic001G096000 Sobic003G119700--Sobic001G096000 Sobic003G119700--Sobic010G278200 Sobic003G119700--Sobic008G046500 Sobic001G451400 Sobic001G451400 Sobic003G119700--Sobic001G451400 Sobic010G074900--Sobic004G345700 Sobic003G205501 Sobic003G205501 Sobic010G074900--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic010G074900--Sobic001G408700 Sobic001G193100 Sobic001G193100 Sobic010G074900--Sobic001G193100 Sobic004G084500 Sobic004G084500 Sobic010G074900--Sobic004G084500 Sobic006G091000 Sobic006G091000 Sobic010G074900--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic010G074900--Sobic005G040900 Sobic004G007300 Sobic004G007300 Sobic010G074900--Sobic004G007300 Sobic003G398400 Sobic003G398400 Sobic010G074900--Sobic003G398400
Octagon: transcription factors


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