Gene annotation
Transcriptome id Sobic.001G335201.1
Synonym -
Functional annotation -
UniProt A0A1Z5S8X3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61110 : zinc ion binding
RAP-DB (Rice) LOC_Os03g30740.1 : expressed protein
MaizeGDB (Corn) Zm00025a052190
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G088900 expressed protein -
2 Sobic.003G311000 histone-lysine N-methyltransferase SUVR3, putative, expressed -
3 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
4 Sobic.006G216000 DAG protein, chloroplast precursor, putative, expressed -
5 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
6 Sobic.001G472100 frigida, putative, expressed -
7 Sobic.001G537800 SNF7 domain containing protein, putative, expressed K12193: VPS24, charged multivesicular body protein 3
8 Sobic.010G217200 ubiquitin-conjugating enzyme, putative, expressed K10583: UBE2S, ubiquitin-conjugating enzyme E2 S
9 Sobic.009G056300 PHD finger protein, putative, expressed -
10 Sobic.007G070300 OsFBL41 - F-box domain and LRR containing protein, expressed -
11 Sobic.006G252100 mediator of RNA polymerase II transcription subunit 7, putative, expressed K15148: mediator of RNA polymerase II transcription subunit 7
12 Sobic.004G016100 expressed protein -
13 Sobic.003G437500 syntaxin 6, putative, expressed -
14 Sobic.001G189600 F-box domain containing protein, expressed -
15 Sobic.003G119400 PUR ALPHA-1, putative, expressed -
16 Sobic.002G033600 Leucine Rich Repeat family protein, expressed -
17 Sobic.003G131300 glycosyl hydrolases family 17 protein, putative, expressed -
18 Sobic.002G253100 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16
19 Sobic.009G001100 expressed protein -
20 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7


Gene co-expression network
sample Sobic001G335201 Sobic001G335201 Sobic007G088900 Sobic007G088900 Sobic001G335201--Sobic007G088900 Sobic003G311000 Sobic003G311000 Sobic001G335201--Sobic003G311000 Sobic007G139400 Sobic007G139400 Sobic001G335201--Sobic007G139400 Sobic006G216000 Sobic006G216000 Sobic001G335201--Sobic006G216000 Sobic001G309100 Sobic001G309100 Sobic001G335201--Sobic001G309100 Sobic001G472100 Sobic001G472100 Sobic001G335201--Sobic001G472100 Sobic001G537800 Sobic001G537800 Sobic001G335201--Sobic001G537800 Sobic010G217200 Sobic010G217200 Sobic001G335201--Sobic010G217200 Sobic009G056300 Sobic009G056300 Sobic001G335201--Sobic009G056300 Sobic006G092800 Sobic006G092800 Sobic007G088900--Sobic006G092800 Sobic004G345700 Sobic004G345700 Sobic007G088900--Sobic004G345700 Sobic004G007300 Sobic004G007300 Sobic007G088900--Sobic004G007300 Sobic001G028400 Sobic001G028400 Sobic007G088900--Sobic001G028400 Sobic003G437500 Sobic003G437500 Sobic007G088900--Sobic003G437500 Sobic004G013600 Sobic004G013600 Sobic007G088900--Sobic004G013600 Sobic007G191100 Sobic007G191100 Sobic007G088900--Sobic007G191100 Sobic007G088900--Sobic007G139400 Sobic003G248500 Sobic003G248500 Sobic007G088900--Sobic003G248500 Sobic001G390500 Sobic001G390500 Sobic003G311000--Sobic001G390500 Sobic003G311000--Sobic001G309100 Sobic003G311000--Sobic007G088900 Sobic003G311000--Sobic001G335201 Sobic003G189900 Sobic003G189900 Sobic003G311000--Sobic003G189900 Sobic004G057800 Sobic004G057800 Sobic003G311000--Sobic004G057800 Sobic003G311000--Sobic001G472100 Sobic003G185200 Sobic003G185200 Sobic003G311000--Sobic003G185200 Sobic002G365100 Sobic002G365100 Sobic003G311000--Sobic002G365100 Sobic004G347100 Sobic004G347100 Sobic007G139400--Sobic004G347100 Sobic002G033600 Sobic002G033600 Sobic007G139400--Sobic002G033600 Sobic007G188900 Sobic007G188900 Sobic007G139400--Sobic007G188900 Sobic009G040800 Sobic009G040800 Sobic007G139400--Sobic009G040800 Sobic007G139400--Sobic007G088900 Sobic005G040900 Sobic005G040900 Sobic007G139400--Sobic005G040900 Sobic002G334600 Sobic002G334600 Sobic007G139400--Sobic002G334600 Sobic009G129600 Sobic009G129600 Sobic007G139400--Sobic009G129600 Sobic003G354100 Sobic003G354100 Sobic007G139400--Sobic003G354100 Sobic004G291400 Sobic004G291400 Sobic006G216000--Sobic004G291400 Sobic002G253100 Sobic002G253100 Sobic006G216000--Sobic002G253100 Sobic003G119400 Sobic003G119400 Sobic006G216000--Sobic003G119400 Sobic006G252100 Sobic006G252100 Sobic006G216000--Sobic006G252100 Sobic002G083400 Sobic002G083400 Sobic006G216000--Sobic002G083400 Sobic001G152000 Sobic001G152000 Sobic006G216000--Sobic001G152000 Sobic001G296400 Sobic001G296400 Sobic006G216000--Sobic001G296400 Sobic001G471600 Sobic001G471600 Sobic006G216000--Sobic001G471600 Sobic006G216000--Sobic001G335201 Sobic001G038100 Sobic001G038100 Sobic001G309100--Sobic001G038100 Sobic003G024800 Sobic003G024800 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic001G309100--Sobic003G189900 Sobic001G309100--Sobic001G390500 Sobic010G071200 Sobic010G071200 Sobic001G309100--Sobic010G071200 Sobic001G309100--Sobic003G437500 Sobic001G350501 Sobic001G350501 Sobic001G309100--Sobic001G350501 Sobic007G117100 Sobic007G117100 Sobic001G309100--Sobic007G117100 Sobic001G472100--Sobic005G040900 Sobic009G059400 Sobic009G059400 Sobic001G472100--Sobic009G059400 Sobic005G198200 Sobic005G198200 Sobic001G472100--Sobic005G198200 Sobic009G125000 Sobic009G125000 Sobic001G472100--Sobic009G125000 Sobic008G058800 Sobic008G058800 Sobic001G472100--Sobic008G058800 Sobic004G345400 Sobic004G345400 Sobic001G472100--Sobic004G345400 Sobic001G472100--Sobic009G129600 Sobic001G472100--Sobic007G139400 Sobic001G472100--Sobic003G354100 Sobic001G029400 Sobic001G029400 Sobic001G537800--Sobic001G029400 Sobic002G224700 Sobic002G224700 Sobic001G537800--Sobic002G224700 Sobic001G537800--Sobic003G185200 Sobic003G045400 Sobic003G045400 Sobic001G537800--Sobic003G045400 Sobic001G537800--Sobic007G088900 Sobic001G467000 Sobic001G467000 Sobic001G537800--Sobic001G467000 Sobic001G537800--Sobic003G248500 Sobic001G537800--Sobic001G335201 Sobic001G537800--Sobic003G311000 Sobic003G389800 Sobic003G389800 Sobic010G217200--Sobic003G389800 Sobic006G254600 Sobic006G254600 Sobic010G217200--Sobic006G254600 Sobic004G015800 Sobic004G015800 Sobic010G217200--Sobic004G015800 Sobic007G115900 Sobic007G115900 Sobic010G217200--Sobic007G115900 Sobic002G378200 Sobic002G378200 Sobic010G217200--Sobic002G378200 Sobic001G522900 Sobic001G522900 Sobic010G217200--Sobic001G522900 Sobic010G217200--Sobic004G013600 Sobic010G217200--Sobic006G092800 Sobic004G316800 Sobic004G316800 Sobic010G217200--Sobic004G316800 Sobic008G125000 Sobic008G125000 Sobic009G056300--Sobic008G125000 Sobic004G206300 Sobic004G206300 Sobic009G056300--Sobic004G206300 Sobic009G056300--Sobic002G224700 Sobic009G194300 Sobic009G194300 Sobic009G056300--Sobic009G194300 Sobic001G041200 Sobic001G041200 Sobic009G056300--Sobic001G041200 Sobic001G080000 Sobic001G080000 Sobic009G056300--Sobic001G080000 Sobic004G027000 Sobic004G027000 Sobic009G056300--Sobic004G027000 Sobic002G394800 Sobic002G394800 Sobic009G056300--Sobic002G394800 Sobic009G056300--Sobic001G152000
Octagon: transcription factors


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