Gene annotation
Transcriptome id Sobic.003G119400.1
Synonym Sb03g010090, PURALPHA-1
Functional annotation PUR ALPHA-1, putative, expressed
UniProt C5XGF6
Pfam PF04845
Panther DB PTHR12611
NCBI CDD KOG3074; Transcriptional regulator of the PUR family, single-stranded-DNA-binding
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32080 : purin-rich alpha 1
RAP-DB (Rice) LOC_Os01g15600.1 : PUR ALPHA-1, putative, expressed
MaizeGDB (Corn) Zm00025a035294 , Zm00025a023983
Brachypodium KQK03717
Barley HORVU3Hr1G036150.10 , HORVU3Hr1G036150.11 , HORVU3Hr1G036150.9
Wheat TraesCS3D02G183300 , TraesCS3A02G177500 , TraesCS3B02G207500
Populus -


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cDNA sequences
Sobic.003G119400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G074300 phytoene dehydrogenase-like, putative, expressed K16750: biogenesis of lysosome-related organelles complex 1 subunit 2
2 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
3 Sobic.002G259400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
4 Sobic.010G146600 cyclin-dependent kinase F-1, putative, expressed -
5 Sobic.006G216000 DAG protein, chloroplast precursor, putative, expressed -
6 Sobic.006G272200 cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
7 Sobic.006G242300 - -
8 Sobic.002G268400 expressed protein -
9 Sobic.002G306400 zinc finger family protein, putative, expressed -
10 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
11 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
12 Sobic.002G402500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
13 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
14 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
15 Sobic.001G152000 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
16 Sobic.001G226100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
17 Sobic.003G142700 expressed protein -
18 Sobic.006G056600 ribosomal protein L4, putative, expressed K02926: RP-L4, MRPL4, large subunit ribosomal protein L4
19 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
20 Sobic.002G253100 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16


Gene co-expression network
sample Sobic003G119400 Sobic003G119400 Sobic004G074300 Sobic004G074300 Sobic003G119400--Sobic004G074300 Sobic001G041200 Sobic001G041200 Sobic003G119400--Sobic001G041200 Sobic002G259400 Sobic002G259400 Sobic003G119400--Sobic002G259400 Sobic010G146600 Sobic010G146600 Sobic003G119400--Sobic010G146600 Sobic006G216000 Sobic006G216000 Sobic003G119400--Sobic006G216000 Sobic006G272200 Sobic006G272200 Sobic003G119400--Sobic006G272200 Sobic006G242300 Sobic006G242300 Sobic003G119400--Sobic006G242300 Sobic002G268400 Sobic002G268400 Sobic003G119400--Sobic002G268400 Sobic002G306400 Sobic002G306400 Sobic003G119400--Sobic002G306400 Sobic004G074300--Sobic002G268400 Sobic004G074300--Sobic003G119400 Sobic001G152000 Sobic001G152000 Sobic004G074300--Sobic001G152000 Sobic009G033900 Sobic009G033900 Sobic004G074300--Sobic009G033900 Sobic001G263000 Sobic001G263000 Sobic004G074300--Sobic001G263000 Sobic004G074300--Sobic002G259400 Sobic010G057900 Sobic010G057900 Sobic004G074300--Sobic010G057900 Sobic004G077600 Sobic004G077600 Sobic004G074300--Sobic004G077600 Sobic006G054500 Sobic006G054500 Sobic004G074300--Sobic006G054500 Sobic001G041200--Sobic006G242300 Sobic001G041200--Sobic003G119400 Sobic006G257001 Sobic006G257001 Sobic001G041200--Sobic006G257001 Sobic006G034800 Sobic006G034800 Sobic001G041200--Sobic006G034800 Sobic001G067900 Sobic001G067900 Sobic001G041200--Sobic001G067900 Sobic001G041200--Sobic002G259400 Sobic001G105100 Sobic001G105100 Sobic001G041200--Sobic001G105100 Sobic006G056600 Sobic006G056600 Sobic001G041200--Sobic006G056600 Sobic001G041200--Sobic009G033900 Sobic002G259400--Sobic003G119400 Sobic002G259400--Sobic004G074300 Sobic002G259400--Sobic001G041200 Sobic002G259400--Sobic002G268400 Sobic002G259400--Sobic009G033900 Sobic010G269100 Sobic010G269100 Sobic002G259400--Sobic010G269100 Sobic006G281500 Sobic006G281500 Sobic002G259400--Sobic006G281500 Sobic002G259400--Sobic001G263000 Sobic010G085200 Sobic010G085200 Sobic002G259400--Sobic010G085200 Sobic010G249300 Sobic010G249300 Sobic010G146600--Sobic010G249300 Sobic010G146600--Sobic003G119400 Sobic004G185600 Sobic004G185600 Sobic010G146600--Sobic004G185600 Sobic003G250500 Sobic003G250500 Sobic010G146600--Sobic003G250500 Sobic002G317300 Sobic002G317300 Sobic010G146600--Sobic002G317300 Sobic001G291100 Sobic001G291100 Sobic010G146600--Sobic001G291100 Sobic001G281600 Sobic001G281600 Sobic010G146600--Sobic001G281600 Sobic009G133400 Sobic009G133400 Sobic010G146600--Sobic009G133400 Sobic010G251100 Sobic010G251100 Sobic010G146600--Sobic010G251100 Sobic004G291400 Sobic004G291400 Sobic006G216000--Sobic004G291400 Sobic002G253100 Sobic002G253100 Sobic006G216000--Sobic002G253100 Sobic006G216000--Sobic003G119400 Sobic006G252100 Sobic006G252100 Sobic006G216000--Sobic006G252100 Sobic002G083400 Sobic002G083400 Sobic006G216000--Sobic002G083400 Sobic006G216000--Sobic001G152000 Sobic001G296400 Sobic001G296400 Sobic006G216000--Sobic001G296400 Sobic001G471600 Sobic001G471600 Sobic006G216000--Sobic001G471600 Sobic001G335201 Sobic001G335201 Sobic006G216000--Sobic001G335201 Sobic006G272200--Sobic010G085200 Sobic006G272200--Sobic003G119400 Sobic001G362300 Sobic001G362300 Sobic006G272200--Sobic001G362300 Sobic002G394800 Sobic002G394800 Sobic006G272200--Sobic002G394800 Sobic009G007700 Sobic009G007700 Sobic006G272200--Sobic009G007700 Sobic006G272200--Sobic004G074300 Sobic001G370300 Sobic001G370300 Sobic006G272200--Sobic001G370300 Sobic006G233000 Sobic006G233000 Sobic006G272200--Sobic006G233000 Sobic008G009600 Sobic008G009600 Sobic006G272200--Sobic008G009600 Sobic006G242300--Sobic001G041200 Sobic003G045400 Sobic003G045400 Sobic006G242300--Sobic003G045400 Sobic006G242300--Sobic006G056600 Sobic006G242300--Sobic009G133400 Sobic006G242300--Sobic003G119400 Sobic006G242300--Sobic001G067900 Sobic006G242300--Sobic009G033900 Sobic004G072800 Sobic004G072800 Sobic006G242300--Sobic004G072800 Sobic003G043100 Sobic003G043100 Sobic006G242300--Sobic003G043100 Sobic002G268400--Sobic010G057900 Sobic002G268400--Sobic001G152000 Sobic002G268400--Sobic004G074300 Sobic002G268400--Sobic006G252100 Sobic002G268400--Sobic009G033900 Sobic006G270900 Sobic006G270900 Sobic002G268400--Sobic006G270900 Sobic006G183000 Sobic006G183000 Sobic002G268400--Sobic006G183000 Sobic004G356900 Sobic004G356900 Sobic002G268400--Sobic004G356900 Sobic003G439800 Sobic003G439800 Sobic002G268400--Sobic003G439800 Sobic002G306400--Sobic002G268400 Sobic002G306400--Sobic003G250500 Sobic003G273400 Sobic003G273400 Sobic002G306400--Sobic003G273400 Sobic001G226100 Sobic001G226100 Sobic002G306400--Sobic001G226100 Sobic001G309100 Sobic001G309100 Sobic002G306400--Sobic001G309100 Sobic001G402300 Sobic001G402300 Sobic002G306400--Sobic001G402300 Sobic001G136900 Sobic001G136900 Sobic002G306400--Sobic001G136900 Sobic002G306400--Sobic010G146600 Sobic002G306400--Sobic004G074300
Octagon: transcription factors


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