Gene annotation
Transcriptome id Sobic.003G142700.1
Synonym Sb03g012340
Functional annotation expressed protein
UniProt C5XI43
Pfam PF09597
Panther DB PTHR34955
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G26800 : -
RAP-DB (Rice) LOC_Os01g19400.1 : expressed protein
MaizeGDB (Corn) Zm00025a036117
Brachypodium -
Barley HORVU4Hr1G007590.1
Wheat TraesCS4A02G267100 , TraesCS4B02G047200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G051200 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed K18159: NDUFAF1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
2 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
3 Sobic.004G283000 nucleic acid binding protein, putative, expressed -
4 Sobic.009G225200 expressed protein -
5 Sobic.003G258900 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
6 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
7 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
8 Sobic.007G007900 mago nashi, putative, expressed K12877: protein mago nashi
9 Sobic.003G442000 IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
10 Sobic.003G000150 - -
11 Sobic.006G242300 - -
12 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
13 Sobic.008G139700 bromodomain associated family protein, expressed K14649: transcription initiation factor TFIID subunit 8
14 Sobic.003G185200 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
15 Sobic.006G082900 expressed protein -
16 Sobic.002G131300 bacterial transferase hexapeptide domain containing protein, expressed -
17 Sobic.004G232000 TLD family protein, putative, expressed -
18 Sobic.008G165700 expressed protein -
19 Sobic.001G127100 alkaline phytoceramidase, putative, expressed K04711: ACER3, dihydroceramidase
20 Sobic.010G146600 cyclin-dependent kinase F-1, putative, expressed -


Gene co-expression network
sample Sobic003G142700 Sobic003G142700 Sobic003G051200 Sobic003G051200 Sobic003G142700--Sobic003G051200 Sobic003G248500 Sobic003G248500 Sobic003G142700--Sobic003G248500 Sobic004G283000 Sobic004G283000 Sobic003G142700--Sobic004G283000 Sobic009G225200 Sobic009G225200 Sobic003G142700--Sobic009G225200 Sobic003G258900 Sobic003G258900 Sobic003G142700--Sobic003G258900 Sobic003G045400 Sobic003G045400 Sobic003G142700--Sobic003G045400 Sobic002G313500 Sobic002G313500 Sobic003G142700--Sobic002G313500 Sobic007G007900 Sobic007G007900 Sobic003G142700--Sobic007G007900 Sobic003G442000 Sobic003G442000 Sobic003G142700--Sobic003G442000 Sobic003G051200--Sobic003G248500 Sobic003G051200--Sobic004G283000 Sobic001G390500 Sobic001G390500 Sobic003G051200--Sobic001G390500 Sobic002G378200 Sobic002G378200 Sobic003G051200--Sobic002G378200 Sobic007G111100 Sobic007G111100 Sobic003G051200--Sobic007G111100 Sobic002G365100 Sobic002G365100 Sobic003G051200--Sobic002G365100 Sobic002G388200 Sobic002G388200 Sobic003G051200--Sobic002G388200 Sobic001G083600 Sobic001G083600 Sobic003G051200--Sobic001G083600 Sobic001G371200 Sobic001G371200 Sobic003G051200--Sobic001G371200 Sobic003G359300 Sobic003G359300 Sobic003G248500--Sobic003G359300 Sobic003G248500--Sobic004G283000 Sobic010G174800 Sobic010G174800 Sobic003G248500--Sobic010G174800 Sobic003G248500--Sobic001G390500 Sobic002G197100 Sobic002G197100 Sobic003G248500--Sobic002G197100 Sobic003G185200 Sobic003G185200 Sobic003G248500--Sobic003G185200 Sobic003G248500--Sobic002G365100 Sobic003G248500--Sobic003G051200 Sobic006G128800 Sobic006G128800 Sobic003G248500--Sobic006G128800 Sobic004G283000--Sobic003G248500 Sobic004G283000--Sobic002G388200 Sobic004G007300 Sobic004G007300 Sobic004G283000--Sobic004G007300 Sobic004G350100 Sobic004G350100 Sobic004G283000--Sobic004G350100 Sobic008G174300 Sobic008G174300 Sobic004G283000--Sobic008G174300 Sobic007G118200 Sobic007G118200 Sobic004G283000--Sobic007G118200 Sobic009G257800 Sobic009G257800 Sobic004G283000--Sobic009G257800 Sobic006G173100 Sobic006G173100 Sobic004G283000--Sobic006G173100 Sobic002G157300 Sobic002G157300 Sobic004G283000--Sobic002G157300 Sobic009G117300 Sobic009G117300 Sobic009G225200--Sobic009G117300 Sobic009G117400 Sobic009G117400 Sobic009G225200--Sobic009G117400 Sobic005G015100 Sobic005G015100 Sobic009G225200--Sobic005G015100 Sobic001G043900 Sobic001G043900 Sobic009G225200--Sobic001G043900 Sobic009G225200--Sobic003G258900 Sobic004G271900 Sobic004G271900 Sobic009G225200--Sobic004G271900 Sobic004G348100 Sobic004G348100 Sobic009G225200--Sobic004G348100 Sobic009G225200--Sobic003G442000 Sobic009G015800 Sobic009G015800 Sobic009G225200--Sobic009G015800 Sobic002G396000 Sobic002G396000 Sobic003G258900--Sobic002G396000 Sobic002G158700 Sobic002G158700 Sobic003G258900--Sobic002G158700 Sobic003G267800 Sobic003G267800 Sobic003G258900--Sobic003G267800 Sobic006G102100 Sobic006G102100 Sobic003G258900--Sobic006G102100 Sobic001G081000 Sobic001G081000 Sobic003G258900--Sobic001G081000 Sobic006G226300 Sobic006G226300 Sobic003G258900--Sobic006G226300 Sobic003G258900--Sobic003G442000 Sobic003G258900--Sobic009G225200 Sobic009G046700 Sobic009G046700 Sobic003G258900--Sobic009G046700 Sobic001G467000 Sobic001G467000 Sobic003G045400--Sobic001G467000 Sobic006G242300 Sobic006G242300 Sobic003G045400--Sobic006G242300 Sobic010G211300 Sobic010G211300 Sobic003G045400--Sobic010G211300 Sobic008G139700 Sobic008G139700 Sobic003G045400--Sobic008G139700 Sobic003G045400--Sobic002G313500 Sobic001G307900 Sobic001G307900 Sobic003G045400--Sobic001G307900 Sobic004G072800 Sobic004G072800 Sobic003G045400--Sobic004G072800 Sobic009G140700 Sobic009G140700 Sobic003G045400--Sobic009G140700 Sobic001G143500 Sobic001G143500 Sobic003G045400--Sobic001G143500 Sobic002G313500--Sobic001G143500 Sobic002G313500--Sobic001G371200 Sobic002G313500--Sobic004G350100 Sobic002G313500--Sobic002G378200 Sobic002G313500--Sobic004G283000 Sobic002G313500--Sobic008G139700 Sobic002G313500--Sobic004G007300 Sobic001G466700 Sobic001G466700 Sobic002G313500--Sobic001G466700 Sobic010G017800 Sobic010G017800 Sobic002G313500--Sobic010G017800 Sobic001G428400 Sobic001G428400 Sobic007G007900--Sobic001G428400 Sobic007G007900--Sobic003G045400 Sobic007G007900--Sobic003G142700 Sobic001G429400 Sobic001G429400 Sobic007G007900--Sobic001G429400 Sobic010G055500 Sobic010G055500 Sobic007G007900--Sobic010G055500 Sobic006G038400 Sobic006G038400 Sobic007G007900--Sobic006G038400 Sobic002G392600 Sobic002G392600 Sobic007G007900--Sobic002G392600 Sobic001G149700 Sobic001G149700 Sobic007G007900--Sobic001G149700 Sobic010G000700 Sobic010G000700 Sobic007G007900--Sobic010G000700 Sobic005G009200 Sobic005G009200 Sobic003G442000--Sobic005G009200 Sobic005G015900 Sobic005G015900 Sobic003G442000--Sobic005G015900 Sobic004G018300 Sobic004G018300 Sobic003G442000--Sobic004G018300 Sobic003G442000--Sobic003G258900 Sobic010G202600 Sobic010G202600 Sobic003G442000--Sobic010G202600 Sobic009G074700 Sobic009G074700 Sobic003G442000--Sobic009G074700 Sobic003G442000--Sobic002G197100 Sobic003G442000--Sobic002G158700 Sobic001G090400 Sobic001G090400 Sobic003G442000--Sobic001G090400
Octagon: transcription factors


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