Gene annotation
Transcriptome id Sobic.001G127100.1
Synonym ATCES1
Functional annotation alkaline phytoceramidase, putative, expressed
UniProt A0A1B6QIP7
Pfam PF05875
Panther DB PTHR12956 PTHR12956:SF28
NCBI CDD KOG2329; Alkaline ceramidase
KEGG Orthology K04711; ACER3, dihydroceramidase
Gene Ontology GO:0016811; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides GO:0016021integral component of membrane GO:0006672ceramide metabolic process


Orthologs (automatic annotation)
TAIR AT4G22330 : Alkaline phytoceramidase (aPHC)
RAP-DB (Rice) LOC_Os03g49180.1 : alkaline phytoceramidase, putative, expressed
MaizeGDB (Corn) Zm00025a017062 , Zm00025a007707
Brachypodium PNT65892 , KQJ93365 , KQJ93364 , KQJ93363
Barley HORVU4Hr1G005780.6 , HORVU4Hr1G005780.4 , HORVU4Hr1G005780.5 , HORVU4Hr1G005780.2 , HORVU4Hr1G005780.3 , HORVU4Hr1G005780.1
Wheat TraesCS4B02G037100 , TraesCS4A02G276600 , TraesCS4D02G034400
Populus -


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cDNA sequences
Sobic.001G127100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G168900 bacterial transferase hexapeptide domain containing protein, expressed K03241: translation initiation factor eIF-2B subunit gamma
2 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
3 Sobic.010G007100 AAA family ATPase, putative, expressed K14571: RIX7, ribosome biogenesis ATPase
4 Sobic.010G232900 surp module family protein, putative, expressed -
5 Sobic.009G074700 heat shock protein binding protein, putative, expressed K09540: SEC63, translocation protein SEC63
6 Sobic.003G142700 expressed protein -
7 Sobic.001G291800 eukaryotic translation initiation factor 3 subunit B, putative, expressed K03253: translation initiation factor 3 subunit B
8 Sobic.001G515000 protein-S-isoprenylcysteine O-methyltransferase. tax, putative, expressed K00587: ICMT, protein-S-isoprenylcysteine O-methyltransferase
9 Sobic.008G098600 DNA-directed RNA polymerase III subunit RPC9, putative, expressed -
10 Sobic.010G055800 CDK-activating kinase assembly factor MAT1 family protein, expressed K10842: CDK-activating kinase assembly factor MAT1
11 Sobic.007G039400 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
12 Sobic.001G527300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
13 Sobic.006G142400 suppressor of stem-loop protein 1, putative, expressed K03142: TFIIH2, GTF2H2, transcription initiation factor TFIIH subunit 2
14 Sobic.004G340400 translation initiation factor eIF-2B subunit epsilon, putative, expressed K03240: translation initiation factor eIF-2B subunit epsilon
15 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
16 Sobic.008G147200 tubulin, putative, expressed -
17 Sobic.009G093400 - -
18 Sobic.001G249700 expressed protein K11877: PSMG3, proteasome assembly chaperone 3
19 Sobic.007G187600 pentatricopeptide, putative, expressed -
20 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G127100 Sobic001G127100 Sobic001G168900 Sobic001G168900 Sobic001G127100--Sobic001G168900 Sobic001G042200 Sobic001G042200 Sobic001G127100--Sobic001G042200 Sobic010G007100 Sobic010G007100 Sobic001G127100--Sobic010G007100 Sobic010G232900 Sobic010G232900 Sobic001G127100--Sobic010G232900 Sobic009G074700 Sobic009G074700 Sobic001G127100--Sobic009G074700 Sobic003G142700 Sobic003G142700 Sobic001G127100--Sobic003G142700 Sobic001G291800 Sobic001G291800 Sobic001G127100--Sobic001G291800 Sobic001G515000 Sobic001G515000 Sobic001G127100--Sobic001G515000 Sobic008G098600 Sobic008G098600 Sobic001G127100--Sobic008G098600 Sobic007G187600 Sobic007G187600 Sobic001G168900--Sobic007G187600 Sobic004G307500 Sobic004G307500 Sobic001G168900--Sobic004G307500 Sobic002G077900 Sobic002G077900 Sobic001G168900--Sobic002G077900 Sobic001G168900--Sobic001G291800 Sobic009G258400 Sobic009G258400 Sobic001G168900--Sobic009G258400 Sobic001G168900--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic001G168900--Sobic006G049100 Sobic004G346100 Sobic004G346100 Sobic001G168900--Sobic004G346100 Sobic003G132000 Sobic003G132000 Sobic001G168900--Sobic003G132000 Sobic010G077500 Sobic010G077500 Sobic001G042200--Sobic010G077500 Sobic004G345400 Sobic004G345400 Sobic001G042200--Sobic004G345400 Sobic001G042200--Sobic007G187600 Sobic008G058800 Sobic008G058800 Sobic001G042200--Sobic008G058800 Sobic007G056500 Sobic007G056500 Sobic001G042200--Sobic007G056500 Sobic003G212900 Sobic003G212900 Sobic001G042200--Sobic003G212900 Sobic007G042900 Sobic007G042900 Sobic001G042200--Sobic007G042900 Sobic009G249700 Sobic009G249700 Sobic001G042200--Sobic009G249700 Sobic006G281700 Sobic006G281700 Sobic001G042200--Sobic006G281700 Sobic001G145400 Sobic001G145400 Sobic010G007100--Sobic001G145400 Sobic008G147200 Sobic008G147200 Sobic010G007100--Sobic008G147200 Sobic004G340400 Sobic004G340400 Sobic010G007100--Sobic004G340400 Sobic006G086600 Sobic006G086600 Sobic010G007100--Sobic006G086600 Sobic005G137700 Sobic005G137700 Sobic010G007100--Sobic005G137700 Sobic006G077200 Sobic006G077200 Sobic010G007100--Sobic006G077200 Sobic002G235200 Sobic002G235200 Sobic010G007100--Sobic002G235200 Sobic006G002800 Sobic006G002800 Sobic010G007100--Sobic006G002800 Sobic003G042400 Sobic003G042400 Sobic010G007100--Sobic003G042400 Sobic010G232900--Sobic001G042200 Sobic007G027700 Sobic007G027700 Sobic010G232900--Sobic007G027700 Sobic008G127400 Sobic008G127400 Sobic010G232900--Sobic008G127400 Sobic010G239800 Sobic010G239800 Sobic010G232900--Sobic010G239800 Sobic002G280600 Sobic002G280600 Sobic010G232900--Sobic002G280600 Sobic003G187200 Sobic003G187200 Sobic010G232900--Sobic003G187200 Sobic003G006400 Sobic003G006400 Sobic010G232900--Sobic003G006400 Sobic006G204800 Sobic006G204800 Sobic010G232900--Sobic006G204800 Sobic001G526300 Sobic001G526300 Sobic010G232900--Sobic001G526300 Sobic001G246500 Sobic001G246500 Sobic009G074700--Sobic001G246500 Sobic010G202600 Sobic010G202600 Sobic009G074700--Sobic010G202600 Sobic010G278600 Sobic010G278600 Sobic009G074700--Sobic010G278600 Sobic006G180700 Sobic006G180700 Sobic009G074700--Sobic006G180700 Sobic002G259800 Sobic002G259800 Sobic009G074700--Sobic002G259800 Sobic009G000400 Sobic009G000400 Sobic009G074700--Sobic009G000400 Sobic002G262700 Sobic002G262700 Sobic009G074700--Sobic002G262700 Sobic009G195200 Sobic009G195200 Sobic009G074700--Sobic009G195200 Sobic006G138000 Sobic006G138000 Sobic009G074700--Sobic006G138000 Sobic003G051200 Sobic003G051200 Sobic003G142700--Sobic003G051200 Sobic003G248500 Sobic003G248500 Sobic003G142700--Sobic003G248500 Sobic004G283000 Sobic004G283000 Sobic003G142700--Sobic004G283000 Sobic009G225200 Sobic009G225200 Sobic003G142700--Sobic009G225200 Sobic003G258900 Sobic003G258900 Sobic003G142700--Sobic003G258900 Sobic003G045400 Sobic003G045400 Sobic003G142700--Sobic003G045400 Sobic002G313500 Sobic002G313500 Sobic003G142700--Sobic002G313500 Sobic007G007900 Sobic007G007900 Sobic003G142700--Sobic007G007900 Sobic003G442000 Sobic003G442000 Sobic003G142700--Sobic003G442000 Sobic001G291800--Sobic004G340400 Sobic001G291800--Sobic001G145400 Sobic005G115500 Sobic005G115500 Sobic001G291800--Sobic005G115500 Sobic004G353000 Sobic004G353000 Sobic001G291800--Sobic004G353000 Sobic010G186600 Sobic010G186600 Sobic001G291800--Sobic010G186600 Sobic009G255600 Sobic009G255600 Sobic001G291800--Sobic009G255600 Sobic001G291800--Sobic008G147200 Sobic007G039400 Sobic007G039400 Sobic001G291800--Sobic007G039400 Sobic001G291800--Sobic001G168900 Sobic004G286500 Sobic004G286500 Sobic001G515000--Sobic004G286500 Sobic004G072100 Sobic004G072100 Sobic001G515000--Sobic004G072100 Sobic010G245000 Sobic010G245000 Sobic001G515000--Sobic010G245000 Sobic002G056701 Sobic002G056701 Sobic001G515000--Sobic002G056701 Sobic010G053800 Sobic010G053800 Sobic001G515000--Sobic010G053800 Sobic006G200600 Sobic006G200600 Sobic001G515000--Sobic006G200600 Sobic001G515000--Sobic003G187200 Sobic002G264200 Sobic002G264200 Sobic001G515000--Sobic002G264200 Sobic007G218000 Sobic007G218000 Sobic001G515000--Sobic007G218000 Sobic008G098600--Sobic010G007100 Sobic003G214300 Sobic003G214300 Sobic008G098600--Sobic003G214300 Sobic003G382500 Sobic003G382500 Sobic008G098600--Sobic003G382500 Sobic009G046700 Sobic009G046700 Sobic008G098600--Sobic009G046700 Sobic008G098600--Sobic003G006400 Sobic006G142400 Sobic006G142400 Sobic008G098600--Sobic006G142400 Sobic009G251200 Sobic009G251200 Sobic008G098600--Sobic009G251200 Sobic010G264000 Sobic010G264000 Sobic008G098600--Sobic010G264000 Sobic001G322600 Sobic001G322600 Sobic008G098600--Sobic001G322600
Octagon: transcription factors


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