Gene annotation
Transcriptome id Sobic.010G055800.1
Synonym Sb10g004870
Functional annotation CDK-activating kinase assembly factor MAT1 family protein, expressed
UniProt C5Z505
Pfam PF06391
Panther DB PTHR12683
NCBI CDD -
KEGG Orthology K10842; CDK-activating kinase assembly factor MAT1
Gene Ontology GO:0007049; cell cycle GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT4G30820 : cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related
RAP-DB (Rice) LOC_Os06g07480.1 : CDK-activating kinase assembly factor MAT1 family protein, expressed
MaizeGDB (Corn) Zm00025a016840 , Zm00025a049873
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G055800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G262700 RNA recognition motif containing protein, putative, expressed K13155: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
2 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
3 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
4 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
5 Sobic.010G187600 26S protease regulatory subunit S10B, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
6 Sobic.003G123000 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
7 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -
8 Sobic.006G186400 ZOS4-12 - C2H2 zinc finger protein, expressed -
9 Sobic.004G068500 CUE domain containing protein, expressed -
10 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
11 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
12 Sobic.001G515100 ATP binding protein, putative, expressed K06883: uncharacterized protein
13 Sobic.009G126600 cyclin-dependent kinase D-1, putative, expressed K02202: cyclin-dependent kinase 7
14 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
15 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
16 Sobic.005G025300 dehydrogenase-phosphopantetheinyltransferase, putative, expressed K06133: LYS5, 4'-phosphopantetheinyl transferase
17 Sobic.001G358500 GA20734-PA, putative, expressed -
18 Sobic.010G028300 bromodomain domain containing protein, expressed -
19 Sobic.001G373400 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
20 Sobic.009G001100 expressed protein -


Gene co-expression network
sample Sobic010G055800 Sobic010G055800 Sobic002G262700 Sobic002G262700 Sobic010G055800--Sobic002G262700 Sobic001G042200 Sobic001G042200 Sobic010G055800--Sobic001G042200 Sobic004G345400 Sobic004G345400 Sobic010G055800--Sobic004G345400 Sobic004G180900 Sobic004G180900 Sobic010G055800--Sobic004G180900 Sobic010G187600 Sobic010G187600 Sobic010G055800--Sobic010G187600 Sobic003G123000 Sobic003G123000 Sobic010G055800--Sobic003G123000 Sobic009G092400 Sobic009G092400 Sobic010G055800--Sobic009G092400 Sobic006G186400 Sobic006G186400 Sobic010G055800--Sobic006G186400 Sobic004G068500 Sobic004G068500 Sobic010G055800--Sobic004G068500 Sobic007G111100 Sobic007G111100 Sobic002G262700--Sobic007G111100 Sobic010G202600 Sobic010G202600 Sobic002G262700--Sobic010G202600 Sobic009G074700 Sobic009G074700 Sobic002G262700--Sobic009G074700 Sobic007G119200 Sobic007G119200 Sobic002G262700--Sobic007G119200 Sobic007G046200 Sobic007G046200 Sobic002G262700--Sobic007G046200 Sobic002G262700--Sobic004G068500 Sobic008G127400 Sobic008G127400 Sobic002G262700--Sobic008G127400 Sobic007G026000 Sobic007G026000 Sobic002G262700--Sobic007G026000 Sobic002G262700--Sobic010G055800 Sobic010G077500 Sobic010G077500 Sobic001G042200--Sobic010G077500 Sobic001G042200--Sobic004G345400 Sobic007G187600 Sobic007G187600 Sobic001G042200--Sobic007G187600 Sobic008G058800 Sobic008G058800 Sobic001G042200--Sobic008G058800 Sobic007G056500 Sobic007G056500 Sobic001G042200--Sobic007G056500 Sobic003G212900 Sobic003G212900 Sobic001G042200--Sobic003G212900 Sobic007G042900 Sobic007G042900 Sobic001G042200--Sobic007G042900 Sobic009G249700 Sobic009G249700 Sobic001G042200--Sobic009G249700 Sobic006G281700 Sobic006G281700 Sobic001G042200--Sobic006G281700 Sobic004G345400--Sobic001G042200 Sobic004G345400--Sobic010G077500 Sobic004G345400--Sobic009G249700 Sobic004G345400--Sobic007G042900 Sobic004G345400--Sobic004G180900 Sobic004G345400--Sobic006G186400 Sobic004G084500 Sobic004G084500 Sobic004G345400--Sobic004G084500 Sobic004G345400--Sobic007G056500 Sobic003G394200 Sobic003G394200 Sobic004G345400--Sobic003G394200 Sobic009G017200 Sobic009G017200 Sobic004G180900--Sobic009G017200 Sobic004G180900--Sobic007G056500 Sobic001G425000 Sobic001G425000 Sobic004G180900--Sobic001G425000 Sobic004G180900--Sobic004G345400 Sobic004G180900--Sobic006G186400 Sobic004G180900--Sobic008G058800 Sobic004G180900--Sobic007G026000 Sobic004G180900--Sobic010G077500 Sobic003G381600 Sobic003G381600 Sobic004G180900--Sobic003G381600 Sobic004G236800 Sobic004G236800 Sobic010G187600--Sobic004G236800 Sobic009G228000 Sobic009G228000 Sobic010G187600--Sobic009G228000 Sobic006G077200 Sobic006G077200 Sobic010G187600--Sobic006G077200 Sobic004G129300 Sobic004G129300 Sobic010G187600--Sobic004G129300 Sobic002G063900 Sobic002G063900 Sobic010G187600--Sobic002G063900 Sobic007G183300 Sobic007G183300 Sobic010G187600--Sobic007G183300 Sobic010G187600--Sobic010G055800 Sobic003G214600 Sobic003G214600 Sobic010G187600--Sobic003G214600 Sobic004G309900 Sobic004G309900 Sobic010G187600--Sobic004G309900 Sobic003G122500 Sobic003G122500 Sobic003G123000--Sobic003G122500 Sobic004G095300 Sobic004G095300 Sobic003G123000--Sobic004G095300 Sobic001G222900 Sobic001G222900 Sobic003G123000--Sobic001G222900 Sobic010G171100 Sobic010G171100 Sobic003G123000--Sobic010G171100 Sobic002G280600 Sobic002G280600 Sobic003G123000--Sobic002G280600 Sobic004G246700 Sobic004G246700 Sobic003G123000--Sobic004G246700 Sobic001G218800 Sobic001G218800 Sobic003G123000--Sobic001G218800 Sobic008G165700 Sobic008G165700 Sobic003G123000--Sobic008G165700 Sobic001G473600 Sobic001G473600 Sobic003G123000--Sobic001G473600 Sobic007G218000 Sobic007G218000 Sobic009G092400--Sobic007G218000 Sobic005G160400 Sobic005G160400 Sobic009G092400--Sobic005G160400 Sobic009G044800 Sobic009G044800 Sobic009G092400--Sobic009G044800 Sobic009G092400--Sobic009G249700 Sobic007G125000 Sobic007G125000 Sobic009G092400--Sobic007G125000 Sobic004G209700 Sobic004G209700 Sobic009G092400--Sobic004G209700 Sobic002G303600 Sobic002G303600 Sobic009G092400--Sobic002G303600 Sobic006G180000 Sobic006G180000 Sobic009G092400--Sobic006G180000 Sobic007G132100 Sobic007G132100 Sobic009G092400--Sobic007G132100 Sobic008G153000 Sobic008G153000 Sobic006G186400--Sobic008G153000 Sobic001G176200 Sobic001G176200 Sobic006G186400--Sobic001G176200 Sobic004G067700 Sobic004G067700 Sobic006G186400--Sobic004G067700 Sobic008G173100 Sobic008G173100 Sobic006G186400--Sobic008G173100 Sobic006G186400--Sobic007G056500 Sobic002G260400 Sobic002G260400 Sobic006G186400--Sobic002G260400 Sobic006G046700 Sobic006G046700 Sobic006G186400--Sobic006G046700 Sobic003G073000 Sobic003G073000 Sobic006G186400--Sobic003G073000 Sobic001G408700 Sobic001G408700 Sobic006G186400--Sobic001G408700 Sobic004G068500--Sobic007G111100 Sobic004G068500--Sobic002G262700 Sobic001G005600 Sobic001G005600 Sobic004G068500--Sobic001G005600 Sobic002G177000 Sobic002G177000 Sobic004G068500--Sobic002G177000 Sobic004G068500--Sobic007G046200 Sobic004G068500--Sobic001G042200 Sobic004G068500--Sobic007G042900 Sobic003G051200 Sobic003G051200 Sobic004G068500--Sobic003G051200 Sobic001G517500 Sobic001G517500 Sobic004G068500--Sobic001G517500
Octagon: transcription factors


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