Gene annotation
Transcriptome id Sobic.005G025300.1
Synonym Sb05g002100
Functional annotation dehydrogenase-phosphopantetheinyltransferase, putative, expressed
UniProt C5Y426
Pfam PF01648
Panther DB PTHR12215
NCBI CDD KOG0945; Alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase
KEGG Orthology K06133; LYS5, 4'-phosphopantetheinyl transferase
Gene Ontology GO:0008897; holo-[acyl-carrier-protein] synthase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT3G11470 : 4\'-phosphopantetheinyl transferase superfamily
RAP-DB (Rice) LOC_Os12g03960.1 : dehydrogenase-phosphopantetheinyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a033400
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G025300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G043400 expressed protein -
2 Sobic.001G294100 ICE-like protease p20 domain containing protein, expressed -
3 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
4 Sobic.001G373400 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
5 Sobic.010G055800 CDK-activating kinase assembly factor MAT1 family protein, expressed K10842: CDK-activating kinase assembly factor MAT1
6 Sobic.002G227200 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
7 Sobic.003G368800 expressed protein -
8 Sobic.004G236800 MAG2, putative, expressed -
9 Sobic.006G078600 expressed protein K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
10 Sobic.001G425000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
11 Sobic.008G173100 actin, putative, expressed K11662: ACTR6, actin-related protein 6
12 Sobic.002G408600 expressed protein -
13 Sobic.001G261496 - -
14 Sobic.009G126600 cyclin-dependent kinase D-1, putative, expressed K02202: cyclin-dependent kinase 7
15 Sobic.009G074700 heat shock protein binding protein, putative, expressed K09540: SEC63, translocation protein SEC63
16 Sobic.001G527700 CAMK_CAMK_like_ULKh_APGy.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
17 Sobic.007G216700 peptidyl-prolyl cis-trans isomerase, putative, expressed -
18 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
19 Sobic.001G136600 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
20 Sobic.010G098200 peroxidase family protein, expressed -


Gene co-expression network
sample Sobic005G025300 Sobic005G025300 Sobic001G043400 Sobic001G043400 Sobic005G025300--Sobic001G043400 Sobic001G294100 Sobic001G294100 Sobic005G025300--Sobic001G294100 Sobic010G278600 Sobic010G278600 Sobic005G025300--Sobic010G278600 Sobic001G373400 Sobic001G373400 Sobic005G025300--Sobic001G373400 Sobic010G055800 Sobic010G055800 Sobic005G025300--Sobic010G055800 Sobic002G227200 Sobic002G227200 Sobic005G025300--Sobic002G227200 Sobic003G368800 Sobic003G368800 Sobic005G025300--Sobic003G368800 Sobic004G236800 Sobic004G236800 Sobic005G025300--Sobic004G236800 Sobic006G078600 Sobic006G078600 Sobic005G025300--Sobic006G078600 Sobic001G087100 Sobic001G087100 Sobic001G043400--Sobic001G087100 Sobic004G232000 Sobic004G232000 Sobic001G043400--Sobic004G232000 Sobic001G043400--Sobic005G025300 Sobic010G166000 Sobic010G166000 Sobic001G043400--Sobic010G166000 Sobic004G096500 Sobic004G096500 Sobic001G043400--Sobic004G096500 Sobic007G216700 Sobic007G216700 Sobic001G043400--Sobic007G216700 Sobic004G219100 Sobic004G219100 Sobic001G043400--Sobic004G219100 Sobic004G018300 Sobic004G018300 Sobic001G043400--Sobic004G018300 Sobic010G268300 Sobic010G268300 Sobic001G043400--Sobic010G268300 Sobic003G185200 Sobic003G185200 Sobic001G294100--Sobic003G185200 Sobic009G042400 Sobic009G042400 Sobic001G294100--Sobic009G042400 Sobic010G000700 Sobic010G000700 Sobic001G294100--Sobic010G000700 Sobic010G202600 Sobic010G202600 Sobic001G294100--Sobic010G202600 Sobic004G246700 Sobic004G246700 Sobic001G294100--Sobic004G246700 Sobic002G197100 Sobic002G197100 Sobic001G294100--Sobic002G197100 Sobic001G425000 Sobic001G425000 Sobic001G294100--Sobic001G425000 Sobic003G442000 Sobic003G442000 Sobic001G294100--Sobic003G442000 Sobic001G294100--Sobic005G025300 Sobic009G040800 Sobic009G040800 Sobic010G278600--Sobic009G040800 Sobic009G074700 Sobic009G074700 Sobic010G278600--Sobic009G074700 Sobic002G408600 Sobic002G408600 Sobic010G278600--Sobic002G408600 Sobic004G285000 Sobic004G285000 Sobic010G278600--Sobic004G285000 Sobic010G278600--Sobic004G236800 Sobic004G246100 Sobic004G246100 Sobic010G278600--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic010G278600--Sobic001G042200 Sobic006G131200 Sobic006G131200 Sobic010G278600--Sobic006G131200 Sobic001G393700 Sobic001G393700 Sobic010G278600--Sobic001G393700 Sobic001G246500 Sobic001G246500 Sobic001G373400--Sobic001G246500 Sobic003G413100 Sobic003G413100 Sobic001G373400--Sobic003G413100 Sobic008G173100 Sobic008G173100 Sobic001G373400--Sobic008G173100 Sobic001G155400 Sobic001G155400 Sobic001G373400--Sobic001G155400 Sobic002G063900 Sobic002G063900 Sobic001G373400--Sobic002G063900 Sobic010G096000 Sobic010G096000 Sobic001G373400--Sobic010G096000 Sobic001G373400--Sobic001G042200 Sobic001G373400--Sobic009G074700 Sobic009G126600 Sobic009G126600 Sobic001G373400--Sobic009G126600 Sobic002G262700 Sobic002G262700 Sobic010G055800--Sobic002G262700 Sobic010G055800--Sobic001G042200 Sobic004G345400 Sobic004G345400 Sobic010G055800--Sobic004G345400 Sobic004G180900 Sobic004G180900 Sobic010G055800--Sobic004G180900 Sobic010G187600 Sobic010G187600 Sobic010G055800--Sobic010G187600 Sobic003G123000 Sobic003G123000 Sobic010G055800--Sobic003G123000 Sobic009G092400 Sobic009G092400 Sobic010G055800--Sobic009G092400 Sobic006G186400 Sobic006G186400 Sobic010G055800--Sobic006G186400 Sobic004G068500 Sobic004G068500 Sobic010G055800--Sobic004G068500 Sobic010G239800 Sobic010G239800 Sobic002G227200--Sobic010G239800 Sobic002G347000 Sobic002G347000 Sobic002G227200--Sobic002G347000 Sobic002G227200--Sobic005G025300 Sobic009G223600 Sobic009G223600 Sobic002G227200--Sobic009G223600 Sobic002G122600 Sobic002G122600 Sobic002G227200--Sobic002G122600 Sobic007G203200 Sobic007G203200 Sobic002G227200--Sobic007G203200 Sobic002G227200--Sobic003G368800 Sobic003G401100 Sobic003G401100 Sobic002G227200--Sobic003G401100 Sobic009G033900 Sobic009G033900 Sobic002G227200--Sobic009G033900 Sobic001G144600 Sobic001G144600 Sobic003G368800--Sobic001G144600 Sobic002G174900 Sobic002G174900 Sobic003G368800--Sobic002G174900 Sobic003G368800--Sobic005G025300 Sobic002G040800 Sobic002G040800 Sobic003G368800--Sobic002G040800 Sobic004G147200 Sobic004G147200 Sobic003G368800--Sobic004G147200 Sobic003G368800--Sobic002G227200 Sobic004G227300 Sobic004G227300 Sobic003G368800--Sobic004G227300 Sobic001G276200 Sobic001G276200 Sobic003G368800--Sobic001G276200 Sobic001G429300 Sobic001G429300 Sobic003G368800--Sobic001G429300 Sobic004G141800 Sobic004G141800 Sobic004G236800--Sobic004G141800 Sobic002G430300 Sobic002G430300 Sobic004G236800--Sobic002G430300 Sobic003G405500 Sobic003G405500 Sobic004G236800--Sobic003G405500 Sobic003G152400 Sobic003G152400 Sobic004G236800--Sobic003G152400 Sobic004G236800--Sobic002G063900 Sobic004G236800--Sobic010G278600 Sobic004G236800--Sobic004G246100 Sobic004G236800--Sobic010G187600 Sobic001G145400 Sobic001G145400 Sobic004G236800--Sobic001G145400 Sobic008G152900 Sobic008G152900 Sobic006G078600--Sobic008G152900 Sobic006G078600--Sobic004G018300 Sobic002G336800 Sobic002G336800 Sobic006G078600--Sobic002G336800 Sobic006G078600--Sobic004G219100 Sobic002G158700 Sobic002G158700 Sobic006G078600--Sobic002G158700 Sobic005G013200 Sobic005G013200 Sobic006G078600--Sobic005G013200 Sobic002G278000 Sobic002G278000 Sobic006G078600--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic006G078600--Sobic008G149800 Sobic006G078600--Sobic010G166000
Octagon: transcription factors


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