Gene annotation
Transcriptome id Sobic.003G368800.1,Sobic.003G368800.3,Sobic.003G368800.2
Synonym Sb03g041020
Functional annotation expressed protein
UniProt A0A1B6Q771 , A0A1B6Q763 , A0A1B6Q785
Pfam PF07762
Panther DB PTHR33074 PTHR33074:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g56900.2,LOC_Os01g56900.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G036460.2 , HORVU2Hr1G036460.1
Wheat TraesCS1B02G173500 , TraesCS6B02G185100
Populus -


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cDNA sequences
Sobic.003G368800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G144600 parafibromin, putative, expressed K15175: parafibromin
2 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
3 Sobic.005G025300 dehydrogenase-phosphopantetheinyltransferase, putative, expressed K06133: LYS5, 4'-phosphopantetheinyl transferase
4 Sobic.002G040800 CAMK_CAMK_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
5 Sobic.004G147200 - -
6 Sobic.002G227200 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
7 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
8 Sobic.001G276200 ACI13, putative, expressed -
9 Sobic.001G429300 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
10 Sobic.002G328100 TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.008G165700 expressed protein -
12 Sobic.001G485600 DAG protein, chloroplast precursor, putative, expressed -
13 Sobic.006G171700 - -
14 Sobic.009G029500 cation efflux family protein, putative, expressed K14689: SLC30A2, solute carrier family 30 (zinc transporter), member 2
15 Sobic.003G053900 zinc finger, C3HC4 type family protein, expressed -
16 Sobic.009G112400 OsFBX361 - F-box domain containing protein, expressed -
17 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
18 Sobic.010G268300 protein phosphatase 2C, putative, expressed -
19 Sobic.007G029100 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -
20 Sobic.003G245900 membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G368800 Sobic003G368800 Sobic001G144600 Sobic001G144600 Sobic003G368800--Sobic001G144600 Sobic002G174900 Sobic002G174900 Sobic003G368800--Sobic002G174900 Sobic005G025300 Sobic005G025300 Sobic003G368800--Sobic005G025300 Sobic002G040800 Sobic002G040800 Sobic003G368800--Sobic002G040800 Sobic004G147200 Sobic004G147200 Sobic003G368800--Sobic004G147200 Sobic002G227200 Sobic002G227200 Sobic003G368800--Sobic002G227200 Sobic004G227300 Sobic004G227300 Sobic003G368800--Sobic004G227300 Sobic001G276200 Sobic001G276200 Sobic003G368800--Sobic001G276200 Sobic001G429300 Sobic001G429300 Sobic003G368800--Sobic001G429300 Sobic001G144600--Sobic003G368800 Sobic006G087400 Sobic006G087400 Sobic001G144600--Sobic006G087400 Sobic001G008800 Sobic001G008800 Sobic001G144600--Sobic001G008800 Sobic001G036300 Sobic001G036300 Sobic001G144600--Sobic001G036300 Sobic003G058900 Sobic003G058900 Sobic001G144600--Sobic003G058900 Sobic010G085200 Sobic010G085200 Sobic001G144600--Sobic010G085200 Sobic009G056300 Sobic009G056300 Sobic001G144600--Sobic009G056300 Sobic001G144600--Sobic001G276200 Sobic002G131300 Sobic002G131300 Sobic001G144600--Sobic002G131300 Sobic009G094800 Sobic009G094800 Sobic002G174900--Sobic009G094800 Sobic002G174900--Sobic003G368800 Sobic003G308700 Sobic003G308700 Sobic002G174900--Sobic003G308700 Sobic002G174900--Sobic002G040800 Sobic008G165700 Sobic008G165700 Sobic002G174900--Sobic008G165700 Sobic001G377000 Sobic001G377000 Sobic002G174900--Sobic001G377000 Sobic006G171700 Sobic006G171700 Sobic002G174900--Sobic006G171700 Sobic007G148200 Sobic007G148200 Sobic002G174900--Sobic007G148200 Sobic001G279200 Sobic001G279200 Sobic002G174900--Sobic001G279200 Sobic001G043400 Sobic001G043400 Sobic005G025300--Sobic001G043400 Sobic001G294100 Sobic001G294100 Sobic005G025300--Sobic001G294100 Sobic010G278600 Sobic010G278600 Sobic005G025300--Sobic010G278600 Sobic001G373400 Sobic001G373400 Sobic005G025300--Sobic001G373400 Sobic010G055800 Sobic010G055800 Sobic005G025300--Sobic010G055800 Sobic005G025300--Sobic002G227200 Sobic005G025300--Sobic003G368800 Sobic004G236800 Sobic004G236800 Sobic005G025300--Sobic004G236800 Sobic006G078600 Sobic006G078600 Sobic005G025300--Sobic006G078600 Sobic010G228700 Sobic010G228700 Sobic002G040800--Sobic010G228700 Sobic002G040800--Sobic009G094800 Sobic001G544500 Sobic001G544500 Sobic002G040800--Sobic001G544500 Sobic002G040800--Sobic002G174900 Sobic008G001400 Sobic008G001400 Sobic002G040800--Sobic008G001400 Sobic004G135300 Sobic004G135300 Sobic002G040800--Sobic004G135300 Sobic006G042200 Sobic006G042200 Sobic002G040800--Sobic006G042200 Sobic002G040800--Sobic003G368800 Sobic006G263000 Sobic006G263000 Sobic002G040800--Sobic006G263000 Sobic006G214400 Sobic006G214400 Sobic004G147200--Sobic006G214400 Sobic003G170200 Sobic003G170200 Sobic004G147200--Sobic003G170200 Sobic010G052500 Sobic010G052500 Sobic004G147200--Sobic010G052500 Sobic003G222300 Sobic003G222300 Sobic004G147200--Sobic003G222300 Sobic010G258300 Sobic010G258300 Sobic004G147200--Sobic010G258300 Sobic007G205600 Sobic007G205600 Sobic004G147200--Sobic007G205600 Sobic001G031300 Sobic001G031300 Sobic004G147200--Sobic001G031300 Sobic002G114700 Sobic002G114700 Sobic004G147200--Sobic002G114700 Sobic004G147200--Sobic003G368800 Sobic010G239800 Sobic010G239800 Sobic002G227200--Sobic010G239800 Sobic002G347000 Sobic002G347000 Sobic002G227200--Sobic002G347000 Sobic002G227200--Sobic005G025300 Sobic009G223600 Sobic009G223600 Sobic002G227200--Sobic009G223600 Sobic002G122600 Sobic002G122600 Sobic002G227200--Sobic002G122600 Sobic007G203200 Sobic007G203200 Sobic002G227200--Sobic007G203200 Sobic002G227200--Sobic003G368800 Sobic003G401100 Sobic003G401100 Sobic002G227200--Sobic003G401100 Sobic009G033900 Sobic009G033900 Sobic002G227200--Sobic009G033900 Sobic001G427500 Sobic001G427500 Sobic004G227300--Sobic001G427500 Sobic001G261597 Sobic001G261597 Sobic004G227300--Sobic001G261597 Sobic004G227300--Sobic006G171700 Sobic003G359900 Sobic003G359900 Sobic004G227300--Sobic003G359900 Sobic003G299000 Sobic003G299000 Sobic004G227300--Sobic003G299000 Sobic004G214100 Sobic004G214100 Sobic004G227300--Sobic004G214100 Sobic002G259400 Sobic002G259400 Sobic004G227300--Sobic002G259400 Sobic007G062500 Sobic007G062500 Sobic004G227300--Sobic007G062500 Sobic006G119800 Sobic006G119800 Sobic004G227300--Sobic006G119800 Sobic006G077200 Sobic006G077200 Sobic001G276200--Sobic006G077200 Sobic001G449900 Sobic001G449900 Sobic001G276200--Sobic001G449900 Sobic001G493200 Sobic001G493200 Sobic001G276200--Sobic001G493200 Sobic003G249600 Sobic003G249600 Sobic001G276200--Sobic003G249600 Sobic004G096400 Sobic004G096400 Sobic001G276200--Sobic004G096400 Sobic006G207200 Sobic006G207200 Sobic001G276200--Sobic006G207200 Sobic003G405500 Sobic003G405500 Sobic001G276200--Sobic003G405500 Sobic003G057700 Sobic003G057700 Sobic001G276200--Sobic003G057700 Sobic007G097400 Sobic007G097400 Sobic001G276200--Sobic007G097400 Sobic010G268300 Sobic010G268300 Sobic001G429300--Sobic010G268300 Sobic010G280100 Sobic010G280100 Sobic001G429300--Sobic010G280100 Sobic006G273200 Sobic006G273200 Sobic001G429300--Sobic006G273200 Sobic001G429300--Sobic002G122600 Sobic004G083700 Sobic004G083700 Sobic001G429300--Sobic004G083700 Sobic001G429300--Sobic008G165700 Sobic003G018900 Sobic003G018900 Sobic001G429300--Sobic003G018900 Sobic001G429300--Sobic006G171700 Sobic001G281600 Sobic001G281600 Sobic001G429300--Sobic001G281600
Octagon: transcription factors


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