Gene annotation
Transcriptome id Sobic.004G147200.2,Sobic.004G147200.1
Synonym
Functional annotation -
UniProt A0A194YPR4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G214400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
2 Sobic.003G170200 OsClp2 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
3 Sobic.010G052500 ZOS6-01 - C2H2 zinc finger protein, expressed -
4 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.010G258300 integral membrane protein, putative, expressed -
6 Sobic.007G205600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
7 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
8 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G368800 expressed protein -
10 Sobic.003G114100 expressed protein -
11 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
12 Sobic.005G084400 la domain containing protein, expressed K15191: La-related protein 7
13 Sobic.009G148900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
14 Sobic.006G263000 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
15 Sobic.008G000900 - -
16 Sobic.002G234700 expressed protein -
17 Sobic.008G078900 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
18 Sobic.007G179750 - -
19 Sobic.007G110200 wound responsive protein, putative, expressed -
20 Sobic.010G005600 SEC14 cytosolic factor family protein, putative, expressed -


Gene co-expression network
sample Sobic004G147200 Sobic004G147200 Sobic006G214400 Sobic006G214400 Sobic004G147200--Sobic006G214400 Sobic003G170200 Sobic003G170200 Sobic004G147200--Sobic003G170200 Sobic010G052500 Sobic010G052500 Sobic004G147200--Sobic010G052500 Sobic003G222300 Sobic003G222300 Sobic004G147200--Sobic003G222300 Sobic010G258300 Sobic010G258300 Sobic004G147200--Sobic010G258300 Sobic007G205600 Sobic007G205600 Sobic004G147200--Sobic007G205600 Sobic001G031300 Sobic001G031300 Sobic004G147200--Sobic001G031300 Sobic002G114700 Sobic002G114700 Sobic004G147200--Sobic002G114700 Sobic003G368800 Sobic003G368800 Sobic004G147200--Sobic003G368800 Sobic006G214400--Sobic002G114700 Sobic009G085400 Sobic009G085400 Sobic006G214400--Sobic009G085400 Sobic008G118000 Sobic008G118000 Sobic006G214400--Sobic008G118000 Sobic001G076200 Sobic001G076200 Sobic006G214400--Sobic001G076200 Sobic006G214400--Sobic004G147200 Sobic005G046500 Sobic005G046500 Sobic006G214400--Sobic005G046500 Sobic007G076700 Sobic007G076700 Sobic006G214400--Sobic007G076700 Sobic003G174800 Sobic003G174800 Sobic006G214400--Sobic003G174800 Sobic008G000900 Sobic008G000900 Sobic006G214400--Sobic008G000900 Sobic001G102500 Sobic001G102500 Sobic003G170200--Sobic001G102500 Sobic003G170200--Sobic007G205600 Sobic008G078900 Sobic008G078900 Sobic003G170200--Sobic008G078900 Sobic003G162800 Sobic003G162800 Sobic003G170200--Sobic003G162800 Sobic003G286300 Sobic003G286300 Sobic003G170200--Sobic003G286300 Sobic001G514100 Sobic001G514100 Sobic003G170200--Sobic001G514100 Sobic001G375000 Sobic001G375000 Sobic003G170200--Sobic001G375000 Sobic001G450600 Sobic001G450600 Sobic003G170200--Sobic001G450600 Sobic003G128400 Sobic003G128400 Sobic003G170200--Sobic003G128400 Sobic010G052500--Sobic003G222300 Sobic003G114100 Sobic003G114100 Sobic010G052500--Sobic003G114100 Sobic006G273000 Sobic006G273000 Sobic010G052500--Sobic006G273000 Sobic009G213400 Sobic009G213400 Sobic010G052500--Sobic009G213400 Sobic001G005500 Sobic001G005500 Sobic010G052500--Sobic001G005500 Sobic010G246600 Sobic010G246600 Sobic010G052500--Sobic010G246600 Sobic001G275200 Sobic001G275200 Sobic010G052500--Sobic001G275200 Sobic007G191900 Sobic007G191900 Sobic010G052500--Sobic007G191900 Sobic010G245100 Sobic010G245100 Sobic010G052500--Sobic010G245100 Sobic003G222300--Sobic010G258300 Sobic003G222300--Sobic010G245100 Sobic003G222300--Sobic010G052500 Sobic003G222300--Sobic009G213400 Sobic001G093600 Sobic001G093600 Sobic003G222300--Sobic001G093600 Sobic008G177850 Sobic008G177850 Sobic003G222300--Sobic008G177850 Sobic009G154600 Sobic009G154600 Sobic003G222300--Sobic009G154600 Sobic003G222300--Sobic001G031300 Sobic003G107300 Sobic003G107300 Sobic003G222300--Sobic003G107300 Sobic010G258300--Sobic003G222300 Sobic007G110200 Sobic007G110200 Sobic010G258300--Sobic007G110200 Sobic010G258300--Sobic001G031300 Sobic003G222600 Sobic003G222600 Sobic010G258300--Sobic003G222600 Sobic010G258300--Sobic007G205600 Sobic010G258300--Sobic009G154600 Sobic010G258300--Sobic003G170200 Sobic004G011566 Sobic004G011566 Sobic010G258300--Sobic004G011566 Sobic003G030400 Sobic003G030400 Sobic010G258300--Sobic003G030400 Sobic001G388400 Sobic001G388400 Sobic007G205600--Sobic001G388400 Sobic007G205600--Sobic003G170200 Sobic001G537700 Sobic001G537700 Sobic007G205600--Sobic001G537700 Sobic007G205600--Sobic010G258300 Sobic006G220600 Sobic006G220600 Sobic007G205600--Sobic006G220600 Sobic007G205600--Sobic003G222600 Sobic010G211500 Sobic010G211500 Sobic007G205600--Sobic010G211500 Sobic007G205600--Sobic001G450600 Sobic007G205600--Sobic001G031300 Sobic001G031300--Sobic010G258300 Sobic001G031300--Sobic007G076700 Sobic001G031300--Sobic007G205600 Sobic004G035000 Sobic004G035000 Sobic001G031300--Sobic004G035000 Sobic001G031300--Sobic009G154600 Sobic001G031300--Sobic003G222300 Sobic001G377000 Sobic001G377000 Sobic001G031300--Sobic001G377000 Sobic001G191200 Sobic001G191200 Sobic001G031300--Sobic001G191200 Sobic001G031300--Sobic007G110200 Sobic002G114700--Sobic008G078900 Sobic002G114700--Sobic003G114100 Sobic006G273400 Sobic006G273400 Sobic002G114700--Sobic006G273400 Sobic002G114700--Sobic001G076200 Sobic003G110700 Sobic003G110700 Sobic002G114700--Sobic003G110700 Sobic007G069400 Sobic007G069400 Sobic002G114700--Sobic007G069400 Sobic002G114700--Sobic006G214400 Sobic002G114700--Sobic004G035000 Sobic002G114700--Sobic007G205600 Sobic001G144600 Sobic001G144600 Sobic003G368800--Sobic001G144600 Sobic002G174900 Sobic002G174900 Sobic003G368800--Sobic002G174900 Sobic005G025300 Sobic005G025300 Sobic003G368800--Sobic005G025300 Sobic002G040800 Sobic002G040800 Sobic003G368800--Sobic002G040800 Sobic003G368800--Sobic004G147200 Sobic002G227200 Sobic002G227200 Sobic003G368800--Sobic002G227200 Sobic004G227300 Sobic004G227300 Sobic003G368800--Sobic004G227300 Sobic001G276200 Sobic001G276200 Sobic003G368800--Sobic001G276200 Sobic001G429300 Sobic001G429300 Sobic003G368800--Sobic001G429300
Octagon: transcription factors


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