Gene annotation
Transcriptome id Sobic.007G029100.1,Sobic.007G029100.2
Synonym Sb07g002530
Functional annotation ATPase BadF/BadG/BcrA/BcrD type, putative, expressed
UniProt C5YMX3 , A0A219D7Y7
Pfam PF01869
Panther DB PTHR12862 PTHR12862:SF6
NCBI CDD KOG1794; N-Acetylglucosamine kinase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G30540 : Actin-like ATPase superfamily protein
RAP-DB (Rice) LOC_Os09g04800.1 : ATPase BadF/BadG/BcrA/BcrD type, putative, expressed
MaizeGDB (Corn) Zm00025a040393 , Zm00025a005021
Brachypodium KQJ94951 , KQJ94952
Barley HORVU7Hr1G073870.2 , HORVU7Hr1G073870.1 , HORVU7Hr1G073870.6 , HORVU7Hr1G073870.7 , HORVU7Hr1G073870.5
Wheat TraesCS7A02G310200 , TraesCS7A02G310200 , TraesCS7A02G310200 , TraesCS7A02G310200 , TraesCS7B02G210100 , TraesCS7B02G210100 , TraesCS7B02G210100 , TraesCS7B02G210100 , TraesCS7D02G306800 , TraesCS7D02G306800 , TraesCS7D02G306800 , TraesCS7D02G306800 , TraesCS7D02G306800
Populus PNT04837 , PNT04836


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cDNA sequences
Sobic.007G029100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G404200 F-box domain containing protein, expressed -
2 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
3 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
4 Sobic.010G113000 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
5 Sobic.010G080300 peptidase, putative, expressed K01436: amidohydrolase
6 Sobic.001G341800 von Willebrand factor type A domain containing protein, expressed -
7 Sobic.002G281800 expressed protein -
8 Sobic.007G073700 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
9 Sobic.005G064800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
10 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
11 Sobic.004G183800 AAA family ATPase, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
12 Sobic.004G190700 zinc finger, C3HC4 type, putative, expressed -
13 Sobic.009G057700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
14 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
15 Sobic.009G094700 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
16 Sobic.010G086900 OsFBX187 - F-box domain containing protein, expressed -
17 Sobic.001G202500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
18 Sobic.004G268100 ornithine carbamoyltransferase, putative, expressed K00611: OTC, argF, ornithine carbamoyltransferase
19 Sobic.004G117800 Ser/Thr protein phosphatase family protein, putative, expressed K18467: vacuolar protein sorting-associated protein 29
20 Sobic.001G043800 stage II sporulation protein E, putative, expressed -


Gene co-expression network
sample Sobic007G029100 Sobic007G029100 Sobic002G404200 Sobic002G404200 Sobic007G029100--Sobic002G404200 Sobic009G029700 Sobic009G029700 Sobic007G029100--Sobic009G029700 Sobic001G380500 Sobic001G380500 Sobic007G029100--Sobic001G380500 Sobic010G113000 Sobic010G113000 Sobic007G029100--Sobic010G113000 Sobic010G080300 Sobic010G080300 Sobic007G029100--Sobic010G080300 Sobic001G341800 Sobic001G341800 Sobic007G029100--Sobic001G341800 Sobic002G281800 Sobic002G281800 Sobic007G029100--Sobic002G281800 Sobic007G073700 Sobic007G073700 Sobic007G029100--Sobic007G073700 Sobic005G064800 Sobic005G064800 Sobic007G029100--Sobic005G064800 Sobic001G300100 Sobic001G300100 Sobic002G404200--Sobic001G300100 Sobic002G142066 Sobic002G142066 Sobic002G404200--Sobic002G142066 Sobic010G100800 Sobic010G100800 Sobic002G404200--Sobic010G100800 Sobic002G404200--Sobic007G029100 Sobic008G193300 Sobic008G193300 Sobic002G404200--Sobic008G193300 Sobic010G086900 Sobic010G086900 Sobic002G404200--Sobic010G086900 Sobic002G404200--Sobic001G341800 Sobic001G279900 Sobic001G279900 Sobic002G404200--Sobic001G279900 Sobic009G004800 Sobic009G004800 Sobic002G404200--Sobic009G004800 Sobic009G029700--Sobic001G380500 Sobic004G268100 Sobic004G268100 Sobic009G029700--Sobic004G268100 Sobic009G029700--Sobic007G029100 Sobic004G117800 Sobic004G117800 Sobic009G029700--Sobic004G117800 Sobic001G437200 Sobic001G437200 Sobic009G029700--Sobic001G437200 Sobic002G039000 Sobic002G039000 Sobic009G029700--Sobic002G039000 Sobic003G310100 Sobic003G310100 Sobic009G029700--Sobic003G310100 Sobic009G029700--Sobic002G281800 Sobic001G202500 Sobic001G202500 Sobic009G029700--Sobic001G202500 Sobic001G380500--Sobic009G029700 Sobic010G108900 Sobic010G108900 Sobic001G380500--Sobic010G108900 Sobic007G168200 Sobic007G168200 Sobic001G380500--Sobic007G168200 Sobic001G380500--Sobic007G029100 Sobic001G218800 Sobic001G218800 Sobic001G380500--Sobic001G218800 Sobic001G380500--Sobic002G039000 Sobic006G168400 Sobic006G168400 Sobic001G380500--Sobic006G168400 Sobic001G418800 Sobic001G418800 Sobic001G380500--Sobic001G418800 Sobic001G380500--Sobic002G404200 Sobic009G148900 Sobic009G148900 Sobic010G113000--Sobic009G148900 Sobic010G113000--Sobic007G029100 Sobic007G110200 Sobic007G110200 Sobic010G113000--Sobic007G110200 Sobic003G222300 Sobic003G222300 Sobic010G113000--Sobic003G222300 Sobic010G113000--Sobic009G029700 Sobic009G017400 Sobic009G017400 Sobic010G113000--Sobic009G017400 Sobic008G001400 Sobic008G001400 Sobic010G113000--Sobic008G001400 Sobic006G153900 Sobic006G153900 Sobic010G113000--Sobic006G153900 Sobic010G113000--Sobic001G380500 Sobic010G080300--Sobic002G281800 Sobic010G080300--Sobic008G193300 Sobic003G125400 Sobic003G125400 Sobic010G080300--Sobic003G125400 Sobic007G046500 Sobic007G046500 Sobic010G080300--Sobic007G046500 Sobic008G063200 Sobic008G063200 Sobic010G080300--Sobic008G063200 Sobic008G144800 Sobic008G144800 Sobic010G080300--Sobic008G144800 Sobic005G072200 Sobic005G072200 Sobic010G080300--Sobic005G072200 Sobic010G080300--Sobic007G029100 Sobic010G080300--Sobic003G310100 Sobic009G190800 Sobic009G190800 Sobic001G341800--Sobic009G190800 Sobic001G341800--Sobic002G404200 Sobic001G341800--Sobic007G029100 Sobic001G341800--Sobic001G202500 Sobic009G036300 Sobic009G036300 Sobic001G341800--Sobic009G036300 Sobic001G324400 Sobic001G324400 Sobic001G341800--Sobic001G324400 Sobic001G341800--Sobic002G281800 Sobic001G341800--Sobic007G168200 Sobic001G367500 Sobic001G367500 Sobic001G341800--Sobic001G367500 Sobic002G281800--Sobic010G080300 Sobic003G291400 Sobic003G291400 Sobic002G281800--Sobic003G291400 Sobic008G072700 Sobic008G072700 Sobic002G281800--Sobic008G072700 Sobic002G281800--Sobic007G046500 Sobic002G281800--Sobic007G029100 Sobic002G281800--Sobic009G190800 Sobic002G281800--Sobic003G310100 Sobic004G152100 Sobic004G152100 Sobic002G281800--Sobic004G152100 Sobic002G281800--Sobic009G029700 Sobic004G190700 Sobic004G190700 Sobic007G073700--Sobic004G190700 Sobic007G073700--Sobic005G064800 Sobic007G073700--Sobic007G029100 Sobic004G142800 Sobic004G142800 Sobic007G073700--Sobic004G142800 Sobic006G242000 Sobic006G242000 Sobic007G073700--Sobic006G242000 Sobic006G127400 Sobic006G127400 Sobic007G073700--Sobic006G127400 Sobic007G073700--Sobic009G029700 Sobic004G131040 Sobic004G131040 Sobic007G073700--Sobic004G131040 Sobic004G174100 Sobic004G174100 Sobic007G073700--Sobic004G174100 Sobic004G202700 Sobic004G202700 Sobic005G064800--Sobic004G202700 Sobic005G064800--Sobic007G073700 Sobic005G064800--Sobic007G029100 Sobic005G064800--Sobic009G190800 Sobic005G064800--Sobic004G174100 Sobic005G064800--Sobic004G142800 Sobic001G416300 Sobic001G416300 Sobic005G064800--Sobic001G416300 Sobic005G064800--Sobic006G242000 Sobic002G339500 Sobic002G339500 Sobic005G064800--Sobic002G339500
Octagon: transcription factors


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