Gene annotation
Transcriptome id Sobic.009G094700.1,Sobic.009G094700.2
Synonym Sb09g012290
Functional annotation haloacid dehalogenase-like hydrolase family protein, putative, expressed
UniProt C5YVS0 , A0A1Z5R1W2
Pfam PF13419
Panther DB PTHR12725 PTHR12725:SF63
NCBI CDD KOG3085; Predicted hydrolase (HAD superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79790 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os11g19460.1 : haloacid dehalogenase-like hydrolase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a029693
Brachypodium PNT63709 , KQJ88652 , KQJ88651 , KQJ88650 , KQJ88648 , KQJ88649
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G094700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit
2 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
3 Sobic.008G089500 Fe-S metabolism associated domain containing protein, expressed K03517: quinolinate synthase
4 Sobic.004G144000 - -
5 Sobic.003G444500 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
6 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
7 Sobic.005G028900 cytochrome c-type biogenesis protein dbsD-like, putative, expressed -
8 Sobic.003G286300 GTPase of unknown function domain containing protein, putative, expressed K03978: GTP-binding protein
9 Sobic.010G086900 OsFBX187 - F-box domain containing protein, expressed -
10 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
11 Sobic.010G074200 - -
12 Sobic.003G221700 psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed -
13 Sobic.001G424300 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K08081: tropinone reductase I
14 Sobic.004G250200 ORMM1(PubMedID : 24676859)@RNA recognition motif family protein, expressed -
15 Sobic.001G207200 MEE12, putative, expressed -
16 Sobic.006G111600 cell division protease ftsH homolog 4, putative, expressed -
17 Sobic.003G439600 amino acid kinase, putative, expressed K09903: uridylate kinase
18 Sobic.006G186600 dihydrodipicolinate synthase, chloroplast precursor, putative, expressed K01714: 4-hydroxy-tetrahydrodipicolinate synthase
19 Sobic.001G161400 single-stranded DNA-binding protein, putative, expressed -
20 Sobic.003G084500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family


Gene co-expression network
sample Sobic009G094700 Sobic009G094700 Sobic004G265900 Sobic004G265900 Sobic009G094700--Sobic004G265900 Sobic009G036300 Sobic009G036300 Sobic009G094700--Sobic009G036300 Sobic008G089500 Sobic008G089500 Sobic009G094700--Sobic008G089500 Sobic004G144000 Sobic004G144000 Sobic009G094700--Sobic004G144000 Sobic003G444500 Sobic003G444500 Sobic009G094700--Sobic003G444500 Sobic003G310100 Sobic003G310100 Sobic009G094700--Sobic003G310100 Sobic005G028900 Sobic005G028900 Sobic009G094700--Sobic005G028900 Sobic003G286300 Sobic003G286300 Sobic009G094700--Sobic003G286300 Sobic010G086900 Sobic010G086900 Sobic009G094700--Sobic010G086900 Sobic004G265900--Sobic009G094700 Sobic004G265900--Sobic004G144000 Sobic004G265900--Sobic003G310100 Sobic004G265900--Sobic008G089500 Sobic004G265900--Sobic003G444500 Sobic003G330100 Sobic003G330100 Sobic004G265900--Sobic003G330100 Sobic004G265900--Sobic005G028900 Sobic010G183400 Sobic010G183400 Sobic004G265900--Sobic010G183400 Sobic008G193300 Sobic008G193300 Sobic004G265900--Sobic008G193300 Sobic007G227600 Sobic007G227600 Sobic009G036300--Sobic007G227600 Sobic001G388400 Sobic001G388400 Sobic009G036300--Sobic001G388400 Sobic010G074200 Sobic010G074200 Sobic009G036300--Sobic010G074200 Sobic010G028000 Sobic010G028000 Sobic009G036300--Sobic010G028000 Sobic010G074100 Sobic010G074100 Sobic009G036300--Sobic010G074100 Sobic010G211500 Sobic010G211500 Sobic009G036300--Sobic010G211500 Sobic009G234200 Sobic009G234200 Sobic009G036300--Sobic009G234200 Sobic006G204100 Sobic006G204100 Sobic009G036300--Sobic006G204100 Sobic002G163700 Sobic002G163700 Sobic009G036300--Sobic002G163700 Sobic005G002900 Sobic005G002900 Sobic008G089500--Sobic005G002900 Sobic001G495200 Sobic001G495200 Sobic008G089500--Sobic001G495200 Sobic001G283700 Sobic001G283700 Sobic008G089500--Sobic001G283700 Sobic004G333400 Sobic004G333400 Sobic008G089500--Sobic004G333400 Sobic004G179200 Sobic004G179200 Sobic008G089500--Sobic004G179200 Sobic003G334100 Sobic003G334100 Sobic008G089500--Sobic003G334100 Sobic001G025400 Sobic001G025400 Sobic008G089500--Sobic001G025400 Sobic008G089500--Sobic003G286300 Sobic002G181000 Sobic002G181000 Sobic008G089500--Sobic002G181000 Sobic004G144000--Sobic005G028900 Sobic004G144000--Sobic003G334100 Sobic004G250200 Sobic004G250200 Sobic004G144000--Sobic004G250200 Sobic004G144000--Sobic004G333400 Sobic004G144000--Sobic010G183400 Sobic003G084500 Sobic003G084500 Sobic004G144000--Sobic003G084500 Sobic004G144000--Sobic003G444500 Sobic004G144000--Sobic002G181000 Sobic004G144000--Sobic004G265900 Sobic001G148200 Sobic001G148200 Sobic003G444500--Sobic001G148200 Sobic003G444500--Sobic003G330100 Sobic003G444500--Sobic004G179200 Sobic002G251400 Sobic002G251400 Sobic003G444500--Sobic002G251400 Sobic009G042200 Sobic009G042200 Sobic003G444500--Sobic009G042200 Sobic003G221700 Sobic003G221700 Sobic003G444500--Sobic003G221700 Sobic003G444500--Sobic003G084500 Sobic002G131700 Sobic002G131700 Sobic003G444500--Sobic002G131700 Sobic003G444500--Sobic004G250200 Sobic001G424300 Sobic001G424300 Sobic003G310100--Sobic001G424300 Sobic002G056800 Sobic002G056800 Sobic003G310100--Sobic002G056800 Sobic001G196200 Sobic001G196200 Sobic003G310100--Sobic001G196200 Sobic001G489800 Sobic001G489800 Sobic003G310100--Sobic001G489800 Sobic001G437200 Sobic001G437200 Sobic003G310100--Sobic001G437200 Sobic001G281500 Sobic001G281500 Sobic003G310100--Sobic001G281500 Sobic006G237100 Sobic006G237100 Sobic003G310100--Sobic006G237100 Sobic002G424100 Sobic002G424100 Sobic003G310100--Sobic002G424100 Sobic006G111600 Sobic006G111600 Sobic003G310100--Sobic006G111600 Sobic006G214700 Sobic006G214700 Sobic005G028900--Sobic006G214700 Sobic005G028900--Sobic004G144000 Sobic005G028900--Sobic010G183400 Sobic005G028900--Sobic004G250200 Sobic003G439600 Sobic003G439600 Sobic005G028900--Sobic003G439600 Sobic003G245800 Sobic003G245800 Sobic005G028900--Sobic003G245800 Sobic003G179400 Sobic003G179400 Sobic005G028900--Sobic003G179400 Sobic005G028900--Sobic007G227600 Sobic005G028900--Sobic004G333400 Sobic001G450600 Sobic001G450600 Sobic003G286300--Sobic001G450600 Sobic003G286300--Sobic003G084500 Sobic003G286300--Sobic009G234200 Sobic003G286300--Sobic003G221700 Sobic003G286300--Sobic003G444500 Sobic003G286300--Sobic004G179200 Sobic002G297400 Sobic002G297400 Sobic003G286300--Sobic002G297400 Sobic003G286300--Sobic003G439600 Sobic003G286300--Sobic003G330100 Sobic001G249400 Sobic001G249400 Sobic010G086900--Sobic001G249400 Sobic009G046800 Sobic009G046800 Sobic010G086900--Sobic009G046800 Sobic010G100800 Sobic010G100800 Sobic010G086900--Sobic010G100800 Sobic002G378000 Sobic002G378000 Sobic010G086900--Sobic002G378000 Sobic001G300100 Sobic001G300100 Sobic010G086900--Sobic001G300100 Sobic004G003900 Sobic004G003900 Sobic010G086900--Sobic004G003900 Sobic002G404200 Sobic002G404200 Sobic010G086900--Sobic002G404200 Sobic008G067100 Sobic008G067100 Sobic010G086900--Sobic008G067100 Sobic004G019500 Sobic004G019500 Sobic010G086900--Sobic004G019500
Octagon: transcription factors


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