Gene annotation
Transcriptome id Sobic.001G202500.1
Synonym ATMP2, ATMAPR3, MAPR3, MSBP2
Functional annotation cytochrome b5-like Heme/Steroid binding domain containing protein, expressed
UniProt C5WWE2
Pfam PF00173
Panther DB PTHR10281 PTHR10281:SF41
NCBI CDD KOG1110; Putative steroid membrane receptor Hpr6.6/25-Dx
KEGG Orthology K17278; membrane-associated progesterone receptor component
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48890 : membrane-associated progesterone binding protein 3
RAP-DB (Rice) LOC_Os10g35850.1 : cytochrome b5-like Heme/Steroid binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006417
Brachypodium -
Barley HORVU1Hr1G045610.8 , HORVU1Hr1G045610.5 , HORVU1Hr1G045610.4 , HORVU1Hr1G045610.7 , HORVU1Hr1G045610.6 , HORVU1Hr1G045610.1 , HORVU1Hr1G045610.3 , HORVU1Hr1G045610.2
Wheat TraesCS1B02G191100 , TraesCS1A02G173200 , TraesCS1A02G173200 , TraesCS1A02G173200 , TraesCS1D02G165500 , TraesCS6D02G218900 , TraesCS1B02G191100 , TraesCS1B02G191100
Populus -


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cDNA sequences
Sobic.001G202500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G297500 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05607: methylglutaconyl-CoA hydratase
2 Sobic.001G161400 single-stranded DNA-binding protein, putative, expressed -
3 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
4 Sobic.001G341800 von Willebrand factor type A domain containing protein, expressed -
5 Sobic.003G283800 transmembrane protein, putative, expressed -
6 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
7 Sobic.001G437200 ATP-dependent Clp protease ATP-binding subunit, putative, expressed -
8 Sobic.002G404200 F-box domain containing protein, expressed -
9 Sobic.004G268100 ornithine carbamoyltransferase, putative, expressed K00611: OTC, argF, ornithine carbamoyltransferase
10 Sobic.007G029100 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -
11 Sobic.001G448700 "TUD1(Ortholog in rice:Hu et al., 2013)"(PubMedID : 31659845)@U-box domain containing protein, expressed -
12 Sobic.004G117800 Ser/Thr protein phosphatase family protein, putative, expressed K18467: vacuolar protein sorting-associated protein 29
13 Sobic.004G287300 polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
14 Sobic.002G332400 PPR repeat domain containing protein, putative, expressed -
15 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
16 Sobic.009G046800 TOC159, putative, expressed -
17 Sobic.002G238000 RNA 3-terminal phosphate cyclase, putative, expressed K11108: RNA 3'-terminal phosphate cyclase-like protein
18 Sobic.006G170200 amino acid kinase, putative, expressed K00930: acetylglutamate kinase
19 Sobic.001G324400 thymidine kinase, putative, expressed K00857: tdk, thymidine kinase
20 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -


Gene co-expression network
sample Sobic001G202500 Sobic001G202500 Sobic004G297500 Sobic004G297500 Sobic001G202500--Sobic004G297500 Sobic001G161400 Sobic001G161400 Sobic001G202500--Sobic001G161400 Sobic009G029700 Sobic009G029700 Sobic001G202500--Sobic009G029700 Sobic001G341800 Sobic001G341800 Sobic001G202500--Sobic001G341800 Sobic003G283800 Sobic003G283800 Sobic001G202500--Sobic003G283800 Sobic003G310100 Sobic003G310100 Sobic001G202500--Sobic003G310100 Sobic001G437200 Sobic001G437200 Sobic001G202500--Sobic001G437200 Sobic002G404200 Sobic002G404200 Sobic001G202500--Sobic002G404200 Sobic004G268100 Sobic004G268100 Sobic001G202500--Sobic004G268100 Sobic004G297500--Sobic001G202500 Sobic004G297500--Sobic003G283800 Sobic002G181132 Sobic002G181132 Sobic004G297500--Sobic002G181132 Sobic001G448600 Sobic001G448600 Sobic004G297500--Sobic001G448600 Sobic006G166500 Sobic006G166500 Sobic004G297500--Sobic006G166500 Sobic009G046800 Sobic009G046800 Sobic004G297500--Sobic009G046800 Sobic002G191100 Sobic002G191100 Sobic004G297500--Sobic002G191100 Sobic005G009300 Sobic005G009300 Sobic004G297500--Sobic005G009300 Sobic009G105200 Sobic009G105200 Sobic004G297500--Sobic009G105200 Sobic006G237100 Sobic006G237100 Sobic001G161400--Sobic006G237100 Sobic003G039300 Sobic003G039300 Sobic001G161400--Sobic003G039300 Sobic006G204100 Sobic006G204100 Sobic001G161400--Sobic006G204100 Sobic003G330100 Sobic003G330100 Sobic001G161400--Sobic003G330100 Sobic002G404900 Sobic002G404900 Sobic001G161400--Sobic002G404900 Sobic003G444500 Sobic003G444500 Sobic001G161400--Sobic003G444500 Sobic009G234200 Sobic009G234200 Sobic001G161400--Sobic009G234200 Sobic003G084500 Sobic003G084500 Sobic001G161400--Sobic003G084500 Sobic003G286300 Sobic003G286300 Sobic001G161400--Sobic003G286300 Sobic001G380500 Sobic001G380500 Sobic009G029700--Sobic001G380500 Sobic009G029700--Sobic004G268100 Sobic007G029100 Sobic007G029100 Sobic009G029700--Sobic007G029100 Sobic004G117800 Sobic004G117800 Sobic009G029700--Sobic004G117800 Sobic009G029700--Sobic001G437200 Sobic002G039000 Sobic002G039000 Sobic009G029700--Sobic002G039000 Sobic009G029700--Sobic003G310100 Sobic002G281800 Sobic002G281800 Sobic009G029700--Sobic002G281800 Sobic009G029700--Sobic001G202500 Sobic009G190800 Sobic009G190800 Sobic001G341800--Sobic009G190800 Sobic001G341800--Sobic002G404200 Sobic001G341800--Sobic007G029100 Sobic001G341800--Sobic001G202500 Sobic009G036300 Sobic009G036300 Sobic001G341800--Sobic009G036300 Sobic001G324400 Sobic001G324400 Sobic001G341800--Sobic001G324400 Sobic001G341800--Sobic002G281800 Sobic007G168200 Sobic007G168200 Sobic001G341800--Sobic007G168200 Sobic001G367500 Sobic001G367500 Sobic001G341800--Sobic001G367500 Sobic003G283800--Sobic006G237100 Sobic003G283800--Sobic009G046800 Sobic003G283800--Sobic001G161400 Sobic010G086900 Sobic010G086900 Sobic003G283800--Sobic010G086900 Sobic003G283800--Sobic005G009300 Sobic003G283800--Sobic004G297500 Sobic004G003900 Sobic004G003900 Sobic003G283800--Sobic004G003900 Sobic002G140000 Sobic002G140000 Sobic003G283800--Sobic002G140000 Sobic001G395300 Sobic001G395300 Sobic003G283800--Sobic001G395300 Sobic001G424300 Sobic001G424300 Sobic003G310100--Sobic001G424300 Sobic002G056800 Sobic002G056800 Sobic003G310100--Sobic002G056800 Sobic001G196200 Sobic001G196200 Sobic003G310100--Sobic001G196200 Sobic001G489800 Sobic001G489800 Sobic003G310100--Sobic001G489800 Sobic003G310100--Sobic001G437200 Sobic001G281500 Sobic001G281500 Sobic003G310100--Sobic001G281500 Sobic003G310100--Sobic006G237100 Sobic002G424100 Sobic002G424100 Sobic003G310100--Sobic002G424100 Sobic006G111600 Sobic006G111600 Sobic003G310100--Sobic006G111600 Sobic003G298400 Sobic003G298400 Sobic001G437200--Sobic003G298400 Sobic001G437200--Sobic006G237100 Sobic001G437200--Sobic003G310100 Sobic001G437200--Sobic002G404900 Sobic009G131600 Sobic009G131600 Sobic001G437200--Sobic009G131600 Sobic001G437200--Sobic001G424300 Sobic001G445200 Sobic001G445200 Sobic001G437200--Sobic001G445200 Sobic001G437200--Sobic003G286300 Sobic001G437200--Sobic001G161400 Sobic001G300100 Sobic001G300100 Sobic002G404200--Sobic001G300100 Sobic002G142066 Sobic002G142066 Sobic002G404200--Sobic002G142066 Sobic010G100800 Sobic010G100800 Sobic002G404200--Sobic010G100800 Sobic002G404200--Sobic007G029100 Sobic008G193300 Sobic008G193300 Sobic002G404200--Sobic008G193300 Sobic002G404200--Sobic010G086900 Sobic002G404200--Sobic001G341800 Sobic001G279900 Sobic001G279900 Sobic002G404200--Sobic001G279900 Sobic009G004800 Sobic009G004800 Sobic002G404200--Sobic009G004800 Sobic004G268100--Sobic009G029700 Sobic002G332400 Sobic002G332400 Sobic004G268100--Sobic002G332400 Sobic009G124000 Sobic009G124000 Sobic004G268100--Sobic009G124000 Sobic002G238000 Sobic002G238000 Sobic004G268100--Sobic002G238000 Sobic004G268100--Sobic001G437200 Sobic004G268100--Sobic003G310100 Sobic006G170200 Sobic006G170200 Sobic004G268100--Sobic006G170200 Sobic004G214400 Sobic004G214400 Sobic004G268100--Sobic004G214400 Sobic001G375000 Sobic001G375000 Sobic004G268100--Sobic001G375000
Octagon: transcription factors


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