Gene annotation
Transcriptome id Sobic.009G046800.1
Synonym TOC159, PPI2, ATTOC159, Sb09g004020, TOC160, TOC86
Functional annotation TOC159, putative, expressed
UniProt A0A1Z5R1K8
Pfam PF04548 PF11886
Panther DB PTHR10903 PTHR10903:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT4G02510 : translocon at the outer envelope membrane of chloroplasts 159
RAP-DB (Rice) LOC_Os05g05950.1 : TOC159, putative, expressed
MaizeGDB (Corn) Zm00025a041066 , Zm00025a038058
Brachypodium KQK07458
Barley HORVU1Hr1G021840.2 , HORVU1Hr1G021840.3 , HORVU1Hr1G021840.1 , HORVU1Hr1G021840.6 , HORVU1Hr1G021840.8 , HORVU1Hr1G021840.9 , HORVU1Hr1G021840.10 , HORVU1Hr1G021840.14 , HORVU1Hr1G021840.15
Wheat TraesCS1B02G122000 , TraesCS1B02G122000 , TraesCS1B02G122000 , TraesCS1B02G122000 , TraesCS1A02G093900 , TraesCS1A02G093900 , TraesCS1A02G093900 , TraesCS1A02G093900 , TraesCS1A02G093900 , TraesCS1D02G102500 , TraesCS1D02G102500 , TraesCS1D02G102500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G086900 OsFBX187 - F-box domain containing protein, expressed -
2 Sobic.009G004800 - -
3 Sobic.001G161400 single-stranded DNA-binding protein, putative, expressed -
4 Sobic.003G039300 expressed protein -
5 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
6 Sobic.004G263200 uncharacterized protein At1g26090, chloroplast precursor, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
7 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
8 Sobic.003G283800 transmembrane protein, putative, expressed -
9 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
10 Sobic.003G444500 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
11 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
12 Sobic.001G460200 PPR repeat domain containing protein, putative, expressed -
13 Sobic.009G214200 phosphoribosylamine--glycine ligase, putative, expressed K01945: phosphoribosylamine---glycine ligase
14 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
15 Sobic.003G084500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
16 Sobic.001G448600 GTP-binding protein, putative, expressed K03978: GTP-binding protein
17 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.001G249400 tetrapyrrole methylase family protein, putative, expressed K07056: 16S rRNA (cytidine1402-2'-O)-methyltransferase
19 Sobic.001G277400 expressed protein -
20 Sobic.002G378000 amidase family protein, putative, expressed -


Gene co-expression network
sample Sobic009G046800 Sobic009G046800 Sobic010G086900 Sobic010G086900 Sobic009G046800--Sobic010G086900 Sobic009G004800 Sobic009G004800 Sobic009G046800--Sobic009G004800 Sobic001G161400 Sobic001G161400 Sobic009G046800--Sobic001G161400 Sobic003G039300 Sobic003G039300 Sobic009G046800--Sobic003G039300 Sobic004G003900 Sobic004G003900 Sobic009G046800--Sobic004G003900 Sobic004G263200 Sobic004G263200 Sobic009G046800--Sobic004G263200 Sobic006G237100 Sobic006G237100 Sobic009G046800--Sobic006G237100 Sobic003G283800 Sobic003G283800 Sobic009G046800--Sobic003G283800 Sobic002G140000 Sobic002G140000 Sobic009G046800--Sobic002G140000 Sobic001G249400 Sobic001G249400 Sobic010G086900--Sobic001G249400 Sobic010G086900--Sobic009G046800 Sobic010G100800 Sobic010G100800 Sobic010G086900--Sobic010G100800 Sobic002G378000 Sobic002G378000 Sobic010G086900--Sobic002G378000 Sobic001G300100 Sobic001G300100 Sobic010G086900--Sobic001G300100 Sobic010G086900--Sobic004G003900 Sobic002G404200 Sobic002G404200 Sobic010G086900--Sobic002G404200 Sobic008G067100 Sobic008G067100 Sobic010G086900--Sobic008G067100 Sobic004G019500 Sobic004G019500 Sobic010G086900--Sobic004G019500 Sobic002G163700 Sobic002G163700 Sobic009G004800--Sobic002G163700 Sobic009G036300 Sobic009G036300 Sobic009G004800--Sobic009G036300 Sobic003G330100 Sobic003G330100 Sobic009G004800--Sobic003G330100 Sobic001G388400 Sobic001G388400 Sobic009G004800--Sobic001G388400 Sobic003G310100 Sobic003G310100 Sobic009G004800--Sobic003G310100 Sobic010G028000 Sobic010G028000 Sobic009G004800--Sobic010G028000 Sobic009G004800--Sobic009G046800 Sobic009G234200 Sobic009G234200 Sobic009G004800--Sobic009G234200 Sobic001G450600 Sobic001G450600 Sobic009G004800--Sobic001G450600 Sobic001G161400--Sobic006G237100 Sobic001G161400--Sobic003G039300 Sobic006G204100 Sobic006G204100 Sobic001G161400--Sobic006G204100 Sobic001G161400--Sobic003G330100 Sobic002G404900 Sobic002G404900 Sobic001G161400--Sobic002G404900 Sobic003G444500 Sobic003G444500 Sobic001G161400--Sobic003G444500 Sobic001G161400--Sobic009G234200 Sobic003G084500 Sobic003G084500 Sobic001G161400--Sobic003G084500 Sobic003G286300 Sobic003G286300 Sobic001G161400--Sobic003G286300 Sobic006G110200 Sobic006G110200 Sobic003G039300--Sobic006G110200 Sobic003G039300--Sobic003G084500 Sobic007G069400 Sobic007G069400 Sobic003G039300--Sobic007G069400 Sobic003G039300--Sobic001G161400 Sobic001G537700 Sobic001G537700 Sobic003G039300--Sobic001G537700 Sobic009G137000 Sobic009G137000 Sobic003G039300--Sobic009G137000 Sobic010G211500 Sobic010G211500 Sobic003G039300--Sobic010G211500 Sobic003G039300--Sobic006G237100 Sobic007G015300 Sobic007G015300 Sobic003G039300--Sobic007G015300 Sobic001G375000 Sobic001G375000 Sobic004G003900--Sobic001G375000 Sobic008G090900 Sobic008G090900 Sobic004G003900--Sobic008G090900 Sobic003G128400 Sobic003G128400 Sobic004G003900--Sobic003G128400 Sobic009G092900 Sobic009G092900 Sobic004G003900--Sobic009G092900 Sobic002G181132 Sobic002G181132 Sobic004G003900--Sobic002G181132 Sobic003G045300 Sobic003G045300 Sobic004G003900--Sobic003G045300 Sobic003G162800 Sobic003G162800 Sobic004G003900--Sobic003G162800 Sobic006G088000 Sobic006G088000 Sobic004G003900--Sobic006G088000 Sobic001G003900 Sobic001G003900 Sobic004G003900--Sobic001G003900 Sobic004G263200--Sobic003G162800 Sobic003G327200 Sobic003G327200 Sobic004G263200--Sobic003G327200 Sobic004G263200--Sobic004G003900 Sobic004G214400 Sobic004G214400 Sobic004G263200--Sobic004G214400 Sobic007G101300 Sobic007G101300 Sobic004G263200--Sobic007G101300 Sobic005G197300 Sobic005G197300 Sobic004G263200--Sobic005G197300 Sobic004G263200--Sobic003G128400 Sobic010G027200 Sobic010G027200 Sobic004G263200--Sobic010G027200 Sobic004G263200--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic006G237100--Sobic001G281500 Sobic006G237100--Sobic010G027200 Sobic006G237100--Sobic001G375000 Sobic006G237100--Sobic002G404900 Sobic006G237100--Sobic002G140000 Sobic006G237100--Sobic001G161400 Sobic001G437200 Sobic001G437200 Sobic006G237100--Sobic001G437200 Sobic007G116100 Sobic007G116100 Sobic006G237100--Sobic007G116100 Sobic006G237100--Sobic003G310100 Sobic003G283800--Sobic006G237100 Sobic003G283800--Sobic009G046800 Sobic003G283800--Sobic001G161400 Sobic003G283800--Sobic010G086900 Sobic005G009300 Sobic005G009300 Sobic003G283800--Sobic005G009300 Sobic004G297500 Sobic004G297500 Sobic003G283800--Sobic004G297500 Sobic003G283800--Sobic004G003900 Sobic003G283800--Sobic002G140000 Sobic001G395300 Sobic001G395300 Sobic003G283800--Sobic001G395300 Sobic002G140000--Sobic010G027200 Sobic002G140000--Sobic007G116100 Sobic002G140000--Sobic007G015300 Sobic005G022800 Sobic005G022800 Sobic002G140000--Sobic005G022800 Sobic002G140000--Sobic006G237100 Sobic006G263800 Sobic006G263800 Sobic002G140000--Sobic006G263800 Sobic001G099000 Sobic001G099000 Sobic002G140000--Sobic001G099000 Sobic002G140000--Sobic001G375000 Sobic001G321400 Sobic001G321400 Sobic002G140000--Sobic001G321400
Octagon: transcription factors


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