Gene annotation
Transcriptome id Sobic.004G263200.1,Sobic.004G263200.4,Sobic.004G263200.3,Sobic.004G263200.2
Synonym Sb04g030140
Functional annotation uncharacterized protein At1g26090, chloroplast precursor, putative, expressed
UniProt C5XZY5 , A0A194YRS4 , A0A194YRN2
Pfam PF02374
Panther DB PTHR10803 PTHR10803:SF2
NCBI CDD -
KEGG Orthology K01551; arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G26090 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g48130.1 : uncharacterized protein At1g26090, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a025033 , Zm00025a025034 , Zm00025a021768
Brachypodium -
Barley -
Wheat TraesCS6A02G276900
Populus -


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cDNA sequences
Sobic.004G263200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G162800 expressed protein -
2 Sobic.003G327200 GHMP kinases ATP-binding protein, putative, expressed K00919: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
3 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
4 Sobic.004G214400 tic20, putative, expressed -
5 Sobic.007G101300 expressed protein -
6 Sobic.005G197300 GTP-binding protein, putative, expressed K03977: engA, GTPase
7 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
8 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
9 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
10 Sobic.001G003900 pentatricopeptide, putative, expressed -
11 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
12 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
13 Sobic.006G088000 translocon Tic40, putative, expressed -
14 Sobic.003G345900 histone deacetylase, putative, expressed -
15 Sobic.001G022500 tRNA synthetases class II domain containing protein, expressed K04567: KARS, lysyl-tRNA synthetase, class II
16 Sobic.004G225600 - -
17 Sobic.003G045300 cobalt ion transporter, putative, expressed -
18 Sobic.001G514100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
20 Sobic.001G249400 tetrapyrrole methylase family protein, putative, expressed K07056: 16S rRNA (cytidine1402-2'-O)-methyltransferase


Gene co-expression network
sample Sobic004G263200 Sobic004G263200 Sobic003G162800 Sobic003G162800 Sobic004G263200--Sobic003G162800 Sobic003G327200 Sobic003G327200 Sobic004G263200--Sobic003G327200 Sobic004G003900 Sobic004G003900 Sobic004G263200--Sobic004G003900 Sobic004G214400 Sobic004G214400 Sobic004G263200--Sobic004G214400 Sobic007G101300 Sobic007G101300 Sobic004G263200--Sobic007G101300 Sobic005G197300 Sobic005G197300 Sobic004G263200--Sobic005G197300 Sobic003G128400 Sobic003G128400 Sobic004G263200--Sobic003G128400 Sobic010G027200 Sobic010G027200 Sobic004G263200--Sobic010G027200 Sobic002G140000 Sobic002G140000 Sobic004G263200--Sobic002G140000 Sobic001G375000 Sobic001G375000 Sobic003G162800--Sobic001G375000 Sobic003G162800--Sobic003G327200 Sobic002G156100 Sobic002G156100 Sobic003G162800--Sobic002G156100 Sobic003G345900 Sobic003G345900 Sobic003G162800--Sobic003G345900 Sobic002G181132 Sobic002G181132 Sobic003G162800--Sobic002G181132 Sobic003G162800--Sobic004G003900 Sobic003G045300 Sobic003G045300 Sobic003G162800--Sobic003G045300 Sobic001G514100 Sobic001G514100 Sobic003G162800--Sobic001G514100 Sobic003G162800--Sobic010G027200 Sobic003G327200--Sobic003G162800 Sobic003G327200--Sobic001G375000 Sobic001G003900 Sobic001G003900 Sobic003G327200--Sobic001G003900 Sobic003G327200--Sobic004G263200 Sobic003G327200--Sobic003G128400 Sobic003G327200--Sobic001G514100 Sobic007G116100 Sobic007G116100 Sobic003G327200--Sobic007G116100 Sobic003G327200--Sobic010G027200 Sobic001G022500 Sobic001G022500 Sobic003G327200--Sobic001G022500 Sobic004G003900--Sobic001G375000 Sobic008G090900 Sobic008G090900 Sobic004G003900--Sobic008G090900 Sobic004G003900--Sobic003G128400 Sobic009G092900 Sobic009G092900 Sobic004G003900--Sobic009G092900 Sobic004G003900--Sobic002G181132 Sobic004G003900--Sobic003G045300 Sobic004G003900--Sobic003G162800 Sobic006G088000 Sobic006G088000 Sobic004G003900--Sobic006G088000 Sobic004G003900--Sobic001G003900 Sobic004G214400--Sobic001G375000 Sobic004G214400--Sobic004G263200 Sobic006G281066 Sobic006G281066 Sobic004G214400--Sobic006G281066 Sobic004G214400--Sobic007G101300 Sobic004G214400--Sobic006G088000 Sobic001G433100 Sobic001G433100 Sobic004G214400--Sobic001G433100 Sobic004G214400--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic004G214400--Sobic006G237100 Sobic004G214400--Sobic004G003900 Sobic005G184300 Sobic005G184300 Sobic007G101300--Sobic005G184300 Sobic005G110481 Sobic005G110481 Sobic007G101300--Sobic005G110481 Sobic007G101300--Sobic003G128400 Sobic002G013700 Sobic002G013700 Sobic007G101300--Sobic002G013700 Sobic009G104700 Sobic009G104700 Sobic007G101300--Sobic009G104700 Sobic007G101300--Sobic001G375000 Sobic001G281500 Sobic001G281500 Sobic007G101300--Sobic001G281500 Sobic001G099000 Sobic001G099000 Sobic007G101300--Sobic001G099000 Sobic007G101300--Sobic010G027200 Sobic005G022800 Sobic005G022800 Sobic005G197300--Sobic005G022800 Sobic005G197300--Sobic001G514100 Sobic005G197300--Sobic001G099000 Sobic004G255500 Sobic004G255500 Sobic005G197300--Sobic004G255500 Sobic006G273400 Sobic006G273400 Sobic005G197300--Sobic006G273400 Sobic005G197300--Sobic004G263200 Sobic005G197300--Sobic001G022500 Sobic002G209600 Sobic002G209600 Sobic005G197300--Sobic002G209600 Sobic004G225600 Sobic004G225600 Sobic005G197300--Sobic004G225600 Sobic003G128400--Sobic001G375000 Sobic003G128400--Sobic007G101300 Sobic003G128400--Sobic003G045300 Sobic003G128400--Sobic005G184300 Sobic003G128400--Sobic004G003900 Sobic006G055800 Sobic006G055800 Sobic003G128400--Sobic006G055800 Sobic003G128400--Sobic002G156100 Sobic002G297400 Sobic002G297400 Sobic003G128400--Sobic002G297400 Sobic010G255100 Sobic010G255100 Sobic003G128400--Sobic010G255100 Sobic010G027200--Sobic002G140000 Sobic010G027200--Sobic001G375000 Sobic010G027200--Sobic001G099000 Sobic010G027200--Sobic007G116100 Sobic010G027200--Sobic006G237100 Sobic007G015300 Sobic007G015300 Sobic010G027200--Sobic007G015300 Sobic010G027200--Sobic005G184300 Sobic004G338300 Sobic004G338300 Sobic010G027200--Sobic004G338300 Sobic010G027200--Sobic009G104700 Sobic002G140000--Sobic010G027200 Sobic002G140000--Sobic007G116100 Sobic002G140000--Sobic007G015300 Sobic002G140000--Sobic005G022800 Sobic002G140000--Sobic006G237100 Sobic006G263800 Sobic006G263800 Sobic002G140000--Sobic006G263800 Sobic002G140000--Sobic001G099000 Sobic002G140000--Sobic001G375000 Sobic001G321400 Sobic001G321400 Sobic002G140000--Sobic001G321400
Octagon: transcription factors


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