Gene annotation
Transcriptome id Sobic.009G057700.1
Synonym ATZIP6, Sb09g004880, ZIP6
Functional annotation metal cation transporter, putative, expressed
UniProt A0A1B6P6W6
Pfam PF02535
Panther DB PTHR11040 PTHR11040:SF26
NCBI CDD KOG1558; Fe2+/Zn2+ regulated transporter
KEGG Orthology K14709; SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT2G30080 : ZIP metal ion transporter family
RAP-DB (Rice) LOC_Os05g07210.1 : metal cation transporter, putative, expressed
MaizeGDB (Corn) Zm00025a038037
Brachypodium KQK07323 , PNT71729 , PNT71728 , KQK07322
Barley HORVU1Hr1G024390.1 , HORVU1Hr1G024390.3 , HORVU1Hr1G024390.2
Wheat TraesCS1D02G112500 , TraesCS1A02G111000 , TraesCS1B02G128800
Populus -


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cDNA sequences
Sobic.009G057700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G008100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
2 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
3 Sobic.007G029100 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -
4 Sobic.002G281800 expressed protein -
5 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
6 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
7 Sobic.010G265800 tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.004G117800 Ser/Thr protein phosphatase family protein, putative, expressed K18467: vacuolar protein sorting-associated protein 29
9 Sobic.004G152100 expressed protein -
10 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
11 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
12 Sobic.002G073900 expressed protein -
13 Sobic.004G287300 polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
14 Sobic.002G040800 CAMK_CAMK_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.010G080300 peptidase, putative, expressed K01436: amidohydrolase
16 Sobic.007G062500 expressed protein -
17 Sobic.006G171700 - -
18 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
19 Sobic.003G368800 expressed protein -
20 Sobic.001G279200 PHLOEM 2-LIKE A10, putative, expressed -


Gene co-expression network
sample Sobic009G057700 Sobic009G057700 Sobic009G008100 Sobic009G008100 Sobic009G057700--Sobic009G008100 Sobic003G308700 Sobic003G308700 Sobic009G057700--Sobic003G308700 Sobic007G029100 Sobic007G029100 Sobic009G057700--Sobic007G029100 Sobic002G281800 Sobic002G281800 Sobic009G057700--Sobic002G281800 Sobic009G029700 Sobic009G029700 Sobic009G057700--Sobic009G029700 Sobic004G227300 Sobic004G227300 Sobic009G057700--Sobic004G227300 Sobic010G265800 Sobic010G265800 Sobic009G057700--Sobic010G265800 Sobic004G117800 Sobic004G117800 Sobic009G057700--Sobic004G117800 Sobic004G152100 Sobic004G152100 Sobic009G057700--Sobic004G152100 Sobic009G008100--Sobic009G057700 Sobic006G042200 Sobic006G042200 Sobic009G008100--Sobic006G042200 Sobic009G008100--Sobic003G308700 Sobic002G073900 Sobic002G073900 Sobic009G008100--Sobic002G073900 Sobic009G008100--Sobic004G227300 Sobic001G222250 Sobic001G222250 Sobic009G008100--Sobic001G222250 Sobic002G040800 Sobic002G040800 Sobic009G008100--Sobic002G040800 Sobic001G261597 Sobic001G261597 Sobic009G008100--Sobic001G261597 Sobic006G043300 Sobic006G043300 Sobic009G008100--Sobic006G043300 Sobic003G308700--Sobic002G073900 Sobic007G054100 Sobic007G054100 Sobic003G308700--Sobic007G054100 Sobic002G174900 Sobic002G174900 Sobic003G308700--Sobic002G174900 Sobic002G273700 Sobic002G273700 Sobic003G308700--Sobic002G273700 Sobic006G172900 Sobic006G172900 Sobic003G308700--Sobic006G172900 Sobic009G094800 Sobic009G094800 Sobic003G308700--Sobic009G094800 Sobic001G387600 Sobic001G387600 Sobic003G308700--Sobic001G387600 Sobic003G308700--Sobic009G008100 Sobic002G187801 Sobic002G187801 Sobic003G308700--Sobic002G187801 Sobic002G404200 Sobic002G404200 Sobic007G029100--Sobic002G404200 Sobic007G029100--Sobic009G029700 Sobic001G380500 Sobic001G380500 Sobic007G029100--Sobic001G380500 Sobic010G113000 Sobic010G113000 Sobic007G029100--Sobic010G113000 Sobic010G080300 Sobic010G080300 Sobic007G029100--Sobic010G080300 Sobic001G341800 Sobic001G341800 Sobic007G029100--Sobic001G341800 Sobic007G029100--Sobic002G281800 Sobic007G073700 Sobic007G073700 Sobic007G029100--Sobic007G073700 Sobic005G064800 Sobic005G064800 Sobic007G029100--Sobic005G064800 Sobic002G281800--Sobic010G080300 Sobic003G291400 Sobic003G291400 Sobic002G281800--Sobic003G291400 Sobic008G072700 Sobic008G072700 Sobic002G281800--Sobic008G072700 Sobic007G046500 Sobic007G046500 Sobic002G281800--Sobic007G046500 Sobic002G281800--Sobic007G029100 Sobic009G190800 Sobic009G190800 Sobic002G281800--Sobic009G190800 Sobic003G310100 Sobic003G310100 Sobic002G281800--Sobic003G310100 Sobic002G281800--Sobic004G152100 Sobic002G281800--Sobic009G029700 Sobic009G029700--Sobic001G380500 Sobic004G268100 Sobic004G268100 Sobic009G029700--Sobic004G268100 Sobic009G029700--Sobic007G029100 Sobic009G029700--Sobic004G117800 Sobic001G437200 Sobic001G437200 Sobic009G029700--Sobic001G437200 Sobic002G039000 Sobic002G039000 Sobic009G029700--Sobic002G039000 Sobic009G029700--Sobic003G310100 Sobic009G029700--Sobic002G281800 Sobic001G202500 Sobic001G202500 Sobic009G029700--Sobic001G202500 Sobic001G427500 Sobic001G427500 Sobic004G227300--Sobic001G427500 Sobic004G227300--Sobic001G261597 Sobic006G171700 Sobic006G171700 Sobic004G227300--Sobic006G171700 Sobic003G359900 Sobic003G359900 Sobic004G227300--Sobic003G359900 Sobic003G299000 Sobic003G299000 Sobic004G227300--Sobic003G299000 Sobic004G214100 Sobic004G214100 Sobic004G227300--Sobic004G214100 Sobic002G259400 Sobic002G259400 Sobic004G227300--Sobic002G259400 Sobic007G062500 Sobic007G062500 Sobic004G227300--Sobic007G062500 Sobic006G119800 Sobic006G119800 Sobic004G227300--Sobic006G119800 Sobic006G004600 Sobic006G004600 Sobic010G265800--Sobic006G004600 Sobic003G413500 Sobic003G413500 Sobic010G265800--Sobic003G413500 Sobic003G314500 Sobic003G314500 Sobic010G265800--Sobic003G314500 Sobic010G265800--Sobic003G308700 Sobic009G148900 Sobic009G148900 Sobic010G265800--Sobic009G148900 Sobic010G265800--Sobic001G387600 Sobic010G265800--Sobic009G057700 Sobic010G265800--Sobic001G427500 Sobic010G245100 Sobic010G245100 Sobic010G265800--Sobic010G245100 Sobic006G170200 Sobic006G170200 Sobic004G117800--Sobic006G170200 Sobic008G051100 Sobic008G051100 Sobic004G117800--Sobic008G051100 Sobic004G117800--Sobic009G029700 Sobic001G280400 Sobic001G280400 Sobic004G117800--Sobic001G280400 Sobic004G136500 Sobic004G136500 Sobic004G117800--Sobic004G136500 Sobic001G008800 Sobic001G008800 Sobic004G117800--Sobic001G008800 Sobic001G132900 Sobic001G132900 Sobic004G117800--Sobic001G132900 Sobic002G058700 Sobic002G058700 Sobic004G117800--Sobic002G058700 Sobic003G058900 Sobic003G058900 Sobic004G117800--Sobic003G058900 Sobic001G391900 Sobic001G391900 Sobic004G152100--Sobic001G391900 Sobic001G447700 Sobic001G447700 Sobic004G152100--Sobic001G447700 Sobic010G218600 Sobic010G218600 Sobic004G152100--Sobic010G218600 Sobic003G085000 Sobic003G085000 Sobic004G152100--Sobic003G085000 Sobic006G256600 Sobic006G256600 Sobic004G152100--Sobic006G256600 Sobic003G170200 Sobic003G170200 Sobic004G152100--Sobic003G170200 Sobic005G127000 Sobic005G127000 Sobic004G152100--Sobic005G127000 Sobic004G152100--Sobic002G281800 Sobic002G102200 Sobic002G102200 Sobic004G152100--Sobic002G102200
Octagon: transcription factors


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