Gene annotation
Transcriptome id Sobic.001G279200.1
Synonym Sb01g027470
Functional annotation PHLOEM 2-LIKE A10, putative, expressed
UniProt C5WQI9
Pfam -
Panther DB PTHR21477:SF16 PTHR21477
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10150 : Carbohydrate-binding protein
RAP-DB (Rice) LOC_Os10g01290.1 : PHLOEM 2-LIKE A10, putative, expressed
MaizeGDB (Corn) Zm00025a003613
Brachypodium KQJ96208
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G279200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
2 Sobic.008G165700 expressed protein -
3 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
4 Sobic.006G171700 - -
5 Sobic.006G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
6 Sobic.001G151900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF593 domain containing protein, expressed -
7 Sobic.001G222900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
8 Sobic.003G151800 expressed protein -
9 Sobic.007G054100 stress-induced protein, putative, expressed -
10 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
11 Sobic.003G264901 - -
12 Sobic.001G429300 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
13 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
14 Sobic.003G368800 expressed protein -
15 Sobic.010G268200 zinc finger, C3HC4 type, domain containing protein, expressed -
16 Sobic.004G275200 zinc-binding protein, putative, expressed -
17 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
18 Sobic.003G359900 C2 domain containing protein, expressed -
19 Sobic.001G377000 auxin-repressed protein, putative, expressed -
20 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -


Gene co-expression network
sample Sobic001G279200 Sobic001G279200 Sobic002G174900 Sobic002G174900 Sobic001G279200--Sobic002G174900 Sobic008G165700 Sobic008G165700 Sobic001G279200--Sobic008G165700 Sobic009G213400 Sobic009G213400 Sobic001G279200--Sobic009G213400 Sobic006G171700 Sobic006G171700 Sobic001G279200--Sobic006G171700 Sobic006G042200 Sobic006G042200 Sobic001G279200--Sobic006G042200 Sobic001G151900 Sobic001G151900 Sobic001G279200--Sobic001G151900 Sobic001G222900 Sobic001G222900 Sobic001G279200--Sobic001G222900 Sobic003G151800 Sobic003G151800 Sobic001G279200--Sobic003G151800 Sobic007G054100 Sobic007G054100 Sobic001G279200--Sobic007G054100 Sobic009G094800 Sobic009G094800 Sobic002G174900--Sobic009G094800 Sobic003G368800 Sobic003G368800 Sobic002G174900--Sobic003G368800 Sobic003G308700 Sobic003G308700 Sobic002G174900--Sobic003G308700 Sobic002G040800 Sobic002G040800 Sobic002G174900--Sobic002G040800 Sobic002G174900--Sobic008G165700 Sobic001G377000 Sobic001G377000 Sobic002G174900--Sobic001G377000 Sobic002G174900--Sobic006G171700 Sobic007G148200 Sobic007G148200 Sobic002G174900--Sobic007G148200 Sobic002G174900--Sobic001G279200 Sobic006G273200 Sobic006G273200 Sobic008G165700--Sobic006G273200 Sobic009G233300 Sobic009G233300 Sobic008G165700--Sobic009G233300 Sobic010G268300 Sobic010G268300 Sobic008G165700--Sobic010G268300 Sobic002G187801 Sobic002G187801 Sobic008G165700--Sobic002G187801 Sobic002G365100 Sobic002G365100 Sobic008G165700--Sobic002G365100 Sobic001G191100 Sobic001G191100 Sobic008G165700--Sobic001G191100 Sobic003G123000 Sobic003G123000 Sobic008G165700--Sobic003G123000 Sobic003G018900 Sobic003G018900 Sobic008G165700--Sobic003G018900 Sobic003G000150 Sobic003G000150 Sobic008G165700--Sobic003G000150 Sobic010G245100 Sobic010G245100 Sobic009G213400--Sobic010G245100 Sobic009G213400--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic009G213400--Sobic004G096300 Sobic006G273000 Sobic006G273000 Sobic009G213400--Sobic006G273000 Sobic003G222300 Sobic003G222300 Sobic009G213400--Sobic003G222300 Sobic001G191200 Sobic001G191200 Sobic009G213400--Sobic001G191200 Sobic006G053700 Sobic006G053700 Sobic009G213400--Sobic006G053700 Sobic001G093600 Sobic001G093600 Sobic009G213400--Sobic001G093600 Sobic010G052500 Sobic010G052500 Sobic009G213400--Sobic010G052500 Sobic004G227300 Sobic004G227300 Sobic006G171700--Sobic004G227300 Sobic006G171700--Sobic003G123000 Sobic002G122600 Sobic002G122600 Sobic006G171700--Sobic002G122600 Sobic006G171700--Sobic008G165700 Sobic010G280100 Sobic010G280100 Sobic006G171700--Sobic010G280100 Sobic001G429300 Sobic001G429300 Sobic006G171700--Sobic001G429300 Sobic009G017400 Sobic009G017400 Sobic006G171700--Sobic009G017400 Sobic006G171700--Sobic010G268300 Sobic006G171700--Sobic002G174900 Sobic004G135300 Sobic004G135300 Sobic006G042200--Sobic004G135300 Sobic006G042200--Sobic007G054100 Sobic001G222250 Sobic001G222250 Sobic006G042200--Sobic001G222250 Sobic004G174900 Sobic004G174900 Sobic006G042200--Sobic004G174900 Sobic008G125600 Sobic008G125600 Sobic006G042200--Sobic008G125600 Sobic004G010101 Sobic004G010101 Sobic006G042200--Sobic004G010101 Sobic009G008100 Sobic009G008100 Sobic006G042200--Sobic009G008100 Sobic002G073900 Sobic002G073900 Sobic006G042200--Sobic002G073900 Sobic006G042200--Sobic002G040800 Sobic001G151900--Sobic001G222900 Sobic001G418800 Sobic001G418800 Sobic001G151900--Sobic001G418800 Sobic005G007700 Sobic005G007700 Sobic001G151900--Sobic005G007700 Sobic001G151900--Sobic003G000150 Sobic009G080200 Sobic009G080200 Sobic001G151900--Sobic009G080200 Sobic003G264901 Sobic003G264901 Sobic001G151900--Sobic003G264901 Sobic001G151900--Sobic001G279200 Sobic010G000700 Sobic010G000700 Sobic001G151900--Sobic010G000700 Sobic001G151900--Sobic002G174900 Sobic001G108900 Sobic001G108900 Sobic001G222900--Sobic001G108900 Sobic001G222900--Sobic003G123000 Sobic001G222900--Sobic005G007700 Sobic004G246700 Sobic004G246700 Sobic001G222900--Sobic004G246700 Sobic005G079800 Sobic005G079800 Sobic001G222900--Sobic005G079800 Sobic008G165100 Sobic008G165100 Sobic001G222900--Sobic008G165100 Sobic002G309800 Sobic002G309800 Sobic001G222900--Sobic002G309800 Sobic002G224700 Sobic002G224700 Sobic001G222900--Sobic002G224700 Sobic004G095300 Sobic004G095300 Sobic001G222900--Sobic004G095300 Sobic003G402200 Sobic003G402200 Sobic003G151800--Sobic003G402200 Sobic009G205600 Sobic009G205600 Sobic003G151800--Sobic009G205600 Sobic001G145050 Sobic001G145050 Sobic003G151800--Sobic001G145050 Sobic002G271600 Sobic002G271600 Sobic003G151800--Sobic002G271600 Sobic005G089000 Sobic005G089000 Sobic003G151800--Sobic005G089000 Sobic003G151800--Sobic006G053700 Sobic008G137800 Sobic008G137800 Sobic003G151800--Sobic008G137800 Sobic007G014600 Sobic007G014600 Sobic003G151800--Sobic007G014600 Sobic003G255100 Sobic003G255100 Sobic003G151800--Sobic003G255100 Sobic007G054100--Sobic003G308700 Sobic007G054100--Sobic006G042200 Sobic002G273700 Sobic002G273700 Sobic007G054100--Sobic002G273700 Sobic007G054100--Sobic002G073900 Sobic003G153800 Sobic003G153800 Sobic007G054100--Sobic003G153800 Sobic007G054100--Sobic002G174900 Sobic007G054100--Sobic002G187801 Sobic007G054100--Sobic004G096300 Sobic005G090600 Sobic005G090600 Sobic007G054100--Sobic005G090600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.