Gene annotation
Transcriptome id Sobic.003G264901.1
Synonym -
Functional annotation -
UniProt A0A1W0VZ10
Pfam PF13639
Panther DB PTHR22937 PTHR22937:SF63
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT1G73760 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os01g49770.1 : zinc finger, C3HC4 type domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027937 , Zm00025a038874
Brachypodium KQK09281
Barley HORVU1Hr1G082970.2 , HORVU1Hr1G082970.1 , HORVU3Hr1G064370.4 , HORVU3Hr1G064370.1 , HORVU3Hr1G064370.3 , HORVU3Hr1G064370.2 , HORVU1Hr1G082970.3 , HORVU1Hr1G082970.4
Wheat TraesCS3D02G260700 , TraesCS3B02G293600 , TraesCS3A02G260500 , TraesCS3A02G260500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
2 Sobic.010G172200 cytochrome P450, putative, expressed -
3 Sobic.001G293800 chloroplast beta-amylase(PubMedID : 26465154)@chloroplast beta-amylase(PubMedID : 26465154)@beta-amylase, putative, expressed K01177: beta-amylase
4 Sobic.006G053700 ACT domain containing protein, expressed -
5 Sobic.007G071000 no apical meristem protein, putative, expressed -
6 Sobic.001G377000 auxin-repressed protein, putative, expressed -
7 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
8 Sobic.003G153800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein beta-fructofuranosidase (Os)(PubMedID : 27208977)@neutral/alkaline invertase, putative, expressed -
9 Sobic.001G053900 nodulin, putative, expressed -
10 Sobic.008G152200 DC1 domain-containing protein, putative, expressed -
11 Sobic.004G096100 expressed protein -
12 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
13 Sobic.005G093400 expressed protein -
14 Sobic.009G245700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.007G014600 transferase family protein, putative, expressed -
16 Sobic.001G240800 tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
18 Sobic.007G054100 stress-induced protein, putative, expressed -
19 Sobic.004G187300 zinc finger protein, putative, expressed -
20 Sobic.001G225500 expressed protein -


Gene co-expression network
sample Sobic003G264901 Sobic003G264901 Sobic004G096300 Sobic004G096300 Sobic003G264901--Sobic004G096300 Sobic010G172200 Sobic010G172200 Sobic003G264901--Sobic010G172200 Sobic001G293800 Sobic001G293800 Sobic003G264901--Sobic001G293800 Sobic006G053700 Sobic006G053700 Sobic003G264901--Sobic006G053700 Sobic007G071000 Sobic007G071000 Sobic003G264901--Sobic007G071000 Sobic001G377000 Sobic001G377000 Sobic003G264901--Sobic001G377000 Sobic009G205600 Sobic009G205600 Sobic003G264901--Sobic009G205600 Sobic003G153800 Sobic003G153800 Sobic003G264901--Sobic003G153800 Sobic001G053900 Sobic001G053900 Sobic003G264901--Sobic001G053900 Sobic004G096300--Sobic010G172200 Sobic004G096300--Sobic001G293800 Sobic004G096300--Sobic001G377000 Sobic009G213400 Sobic009G213400 Sobic004G096300--Sobic009G213400 Sobic004G096300--Sobic003G264901 Sobic004G096300--Sobic006G053700 Sobic004G096300--Sobic001G053900 Sobic007G014600 Sobic007G014600 Sobic004G096300--Sobic007G014600 Sobic008G152200 Sobic008G152200 Sobic004G096300--Sobic008G152200 Sobic010G172200--Sobic004G096300 Sobic010G172200--Sobic003G264901 Sobic010G172200--Sobic006G053700 Sobic010G172200--Sobic001G293800 Sobic010G172200--Sobic001G377000 Sobic010G172200--Sobic007G071000 Sobic001G225500 Sobic001G225500 Sobic010G172200--Sobic001G225500 Sobic010G172200--Sobic007G014600 Sobic010G172200--Sobic008G152200 Sobic001G293800--Sobic004G096300 Sobic001G293800--Sobic003G264901 Sobic001G293800--Sobic001G377000 Sobic001G293800--Sobic010G172200 Sobic001G293800--Sobic003G153800 Sobic001G293800--Sobic007G071000 Sobic004G275200 Sobic004G275200 Sobic001G293800--Sobic004G275200 Sobic001G293800--Sobic006G053700 Sobic001G225400 Sobic001G225400 Sobic001G293800--Sobic001G225400 Sobic006G053700--Sobic004G096300 Sobic006G053700--Sobic010G172200 Sobic006G053700--Sobic007G014600 Sobic006G053700--Sobic009G213400 Sobic006G053700--Sobic003G264901 Sobic002G209100 Sobic002G209100 Sobic006G053700--Sobic002G209100 Sobic002G271600 Sobic002G271600 Sobic006G053700--Sobic002G271600 Sobic001G005500 Sobic001G005500 Sobic006G053700--Sobic001G005500 Sobic007G191900 Sobic007G191900 Sobic006G053700--Sobic007G191900 Sobic007G071000--Sobic008G152200 Sobic007G071000--Sobic001G377000 Sobic007G071000--Sobic004G096300 Sobic007G071000--Sobic003G264901 Sobic007G071000--Sobic010G172200 Sobic007G071000--Sobic001G293800 Sobic007G071000--Sobic003G153800 Sobic007G071000--Sobic009G205600 Sobic007G071000--Sobic001G053900 Sobic001G191200 Sobic001G191200 Sobic001G377000--Sobic001G191200 Sobic001G377000--Sobic009G213400 Sobic001G377000--Sobic004G096300 Sobic003G406700 Sobic003G406700 Sobic001G377000--Sobic003G406700 Sobic007G148200 Sobic007G148200 Sobic001G377000--Sobic007G148200 Sobic001G377000--Sobic001G293800 Sobic001G377000--Sobic007G071000 Sobic001G377000--Sobic010G172200 Sobic001G377000--Sobic003G264901 Sobic004G217700 Sobic004G217700 Sobic009G205600--Sobic004G217700 Sobic003G402200 Sobic003G402200 Sobic009G205600--Sobic003G402200 Sobic009G205600--Sobic002G271600 Sobic001G410450 Sobic001G410450 Sobic009G205600--Sobic001G410450 Sobic009G205600--Sobic007G014600 Sobic004G195800 Sobic004G195800 Sobic009G205600--Sobic004G195800 Sobic009G205600--Sobic002G209100 Sobic006G060800 Sobic006G060800 Sobic009G205600--Sobic006G060800 Sobic004G187300 Sobic004G187300 Sobic009G205600--Sobic004G187300 SobicK020500 SobicK020500 Sobic003G153800--SobicK020500 Sobic003G153800--Sobic004G187300 Sobic003G153800--Sobic004G096300 Sobic003G153800--Sobic001G293800 Sobic003G153800--Sobic009G205600 Sobic003G153800--Sobic003G264901 Sobic003G153800--Sobic007G071000 Sobic003G153800--Sobic001G410450 Sobic006G152500 Sobic006G152500 Sobic003G153800--Sobic006G152500 Sobic001G053900--Sobic004G096300 Sobic002G376700 Sobic002G376700 Sobic001G053900--Sobic002G376700 Sobic010G214000 Sobic010G214000 Sobic001G053900--Sobic010G214000 Sobic001G291200 Sobic001G291200 Sobic001G053900--Sobic001G291200 Sobic001G053900--Sobic003G264901 Sobic004G113800 Sobic004G113800 Sobic001G053900--Sobic004G113800 Sobic006G172900 Sobic006G172900 Sobic001G053900--Sobic006G172900 Sobic001G053900--Sobic008G152200 Sobic001G053900--Sobic007G071000
Octagon: transcription factors


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