Gene annotation
Transcriptome id Sobic.007G054100.1,Sobic.007G054100.2
Synonym Sb07g004370
Functional annotation stress-induced protein, putative, expressed
UniProt C5YHG5
Pfam PF06219
Panther DB PTHR31317 PTHR31317:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17640 : Protein of unknown function (DUF1005)
RAP-DB (Rice) LOC_Os08g06640.1 : stress-induced protein, putative, expressed
MaizeGDB (Corn) Zm00025a055061
Brachypodium KQJ95255
Barley HORVU6Hr1G073740.1 , HORVU6Hr1G073740.2
Wheat TraesCS6A02G296800 , TraesCS6B02G326600 , TraesCS6D02G277000
Populus -


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cDNA sequences
Sobic.007G054100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
2 Sobic.006G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
3 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
4 Sobic.002G073900 expressed protein -
5 Sobic.003G153800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein beta-fructofuranosidase (Os)(PubMedID : 27208977)@neutral/alkaline invertase, putative, expressed -
6 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
7 Sobic.002G187801 - K03134: transcription initiation factor TFIID subunit 10
8 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
9 Sobic.005G090600 peptide transporter PTR2, putative, expressed -
10 Sobic.004G010101 - -
11 Sobic.004G275200 zinc-binding protein, putative, expressed -
12 Sobic.001G511000 peptide transporter PTR3-A, putative, expressed -
13 Sobic.001G351100 LOL3, putative, expressed -
14 Sobic.003G264901 - -
15 Sobic.001G284800 histone H3, putative, expressed K11253: histone H3
16 Sobic.004G135300 - -
17 Sobic.009G008100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
18 Sobic.007G071000 no apical meristem protein, putative, expressed -
19 Sobic.008G042500 expressed protein -
20 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic007G054100 Sobic007G054100 Sobic003G308700 Sobic003G308700 Sobic007G054100--Sobic003G308700 Sobic006G042200 Sobic006G042200 Sobic007G054100--Sobic006G042200 Sobic002G273700 Sobic002G273700 Sobic007G054100--Sobic002G273700 Sobic002G073900 Sobic002G073900 Sobic007G054100--Sobic002G073900 Sobic003G153800 Sobic003G153800 Sobic007G054100--Sobic003G153800 Sobic002G174900 Sobic002G174900 Sobic007G054100--Sobic002G174900 Sobic002G187801 Sobic002G187801 Sobic007G054100--Sobic002G187801 Sobic004G096300 Sobic004G096300 Sobic007G054100--Sobic004G096300 Sobic005G090600 Sobic005G090600 Sobic007G054100--Sobic005G090600 Sobic003G308700--Sobic002G073900 Sobic003G308700--Sobic007G054100 Sobic003G308700--Sobic002G174900 Sobic003G308700--Sobic002G273700 Sobic006G172900 Sobic006G172900 Sobic003G308700--Sobic006G172900 Sobic009G094800 Sobic009G094800 Sobic003G308700--Sobic009G094800 Sobic001G387600 Sobic001G387600 Sobic003G308700--Sobic001G387600 Sobic009G008100 Sobic009G008100 Sobic003G308700--Sobic009G008100 Sobic003G308700--Sobic002G187801 Sobic004G135300 Sobic004G135300 Sobic006G042200--Sobic004G135300 Sobic006G042200--Sobic007G054100 Sobic001G222250 Sobic001G222250 Sobic006G042200--Sobic001G222250 Sobic004G174900 Sobic004G174900 Sobic006G042200--Sobic004G174900 Sobic008G125600 Sobic008G125600 Sobic006G042200--Sobic008G125600 Sobic004G010101 Sobic004G010101 Sobic006G042200--Sobic004G010101 Sobic006G042200--Sobic009G008100 Sobic006G042200--Sobic002G073900 Sobic002G040800 Sobic002G040800 Sobic006G042200--Sobic002G040800 Sobic002G273700--Sobic007G054100 Sobic002G273700--Sobic003G308700 Sobic004G340700 Sobic004G340700 Sobic002G273700--Sobic004G340700 Sobic002G373100 Sobic002G373100 Sobic002G273700--Sobic002G373100 Sobic002G273700--Sobic002G040800 Sobic008G001400 Sobic008G001400 Sobic002G273700--Sobic008G001400 Sobic007G120401 Sobic007G120401 Sobic002G273700--Sobic007G120401 Sobic009G082200 Sobic009G082200 Sobic002G273700--Sobic009G082200 Sobic002G273700--Sobic006G042200 Sobic002G073900--Sobic003G308700 Sobic005G072200 Sobic005G072200 Sobic002G073900--Sobic005G072200 Sobic002G073900--Sobic006G042200 Sobic002G073900--Sobic007G054100 Sobic001G261597 Sobic001G261597 Sobic002G073900--Sobic001G261597 Sobic004G092000 Sobic004G092000 Sobic002G073900--Sobic004G092000 Sobic002G073900--Sobic009G008100 Sobic004G227300 Sobic004G227300 Sobic002G073900--Sobic004G227300 Sobic010G009400 Sobic010G009400 Sobic002G073900--Sobic010G009400 SobicK020500 SobicK020500 Sobic003G153800--SobicK020500 Sobic004G187300 Sobic004G187300 Sobic003G153800--Sobic004G187300 Sobic003G153800--Sobic004G096300 Sobic001G293800 Sobic001G293800 Sobic003G153800--Sobic001G293800 Sobic009G205600 Sobic009G205600 Sobic003G153800--Sobic009G205600 Sobic003G264901 Sobic003G264901 Sobic003G153800--Sobic003G264901 Sobic007G071000 Sobic007G071000 Sobic003G153800--Sobic007G071000 Sobic001G410450 Sobic001G410450 Sobic003G153800--Sobic001G410450 Sobic006G152500 Sobic006G152500 Sobic003G153800--Sobic006G152500 Sobic002G174900--Sobic009G094800 Sobic003G368800 Sobic003G368800 Sobic002G174900--Sobic003G368800 Sobic002G174900--Sobic003G308700 Sobic002G174900--Sobic002G040800 Sobic008G165700 Sobic008G165700 Sobic002G174900--Sobic008G165700 Sobic001G377000 Sobic001G377000 Sobic002G174900--Sobic001G377000 Sobic006G171700 Sobic006G171700 Sobic002G174900--Sobic006G171700 Sobic007G148200 Sobic007G148200 Sobic002G174900--Sobic007G148200 Sobic001G279200 Sobic001G279200 Sobic002G174900--Sobic001G279200 Sobic002G187801--Sobic008G165700 Sobic001G253700 Sobic001G253700 Sobic002G187801--Sobic001G253700 Sobic009G233300 Sobic009G233300 Sobic002G187801--Sobic009G233300 Sobic006G273200 Sobic006G273200 Sobic002G187801--Sobic006G273200 Sobic001G284800 Sobic001G284800 Sobic002G187801--Sobic001G284800 Sobic004G003501 Sobic004G003501 Sobic002G187801--Sobic004G003501 Sobic003G000150 Sobic003G000150 Sobic002G187801--Sobic003G000150 Sobic002G092300 Sobic002G092300 Sobic002G187801--Sobic002G092300 Sobic002G365100 Sobic002G365100 Sobic002G187801--Sobic002G365100 Sobic010G172200 Sobic010G172200 Sobic004G096300--Sobic010G172200 Sobic004G096300--Sobic001G293800 Sobic004G096300--Sobic001G377000 Sobic009G213400 Sobic009G213400 Sobic004G096300--Sobic009G213400 Sobic004G096300--Sobic003G264901 Sobic006G053700 Sobic006G053700 Sobic004G096300--Sobic006G053700 Sobic001G053900 Sobic001G053900 Sobic004G096300--Sobic001G053900 Sobic007G014600 Sobic007G014600 Sobic004G096300--Sobic007G014600 Sobic008G152200 Sobic008G152200 Sobic004G096300--Sobic008G152200 Sobic005G090600--Sobic007G054100 Sobic002G216500 Sobic002G216500 Sobic005G090600--Sobic002G216500 Sobic003G376200 Sobic003G376200 Sobic005G090600--Sobic003G376200 Sobic005G090600--Sobic004G092000 Sobic005G090600--Sobic002G073900 Sobic005G090600--Sobic003G153800 Sobic010G214200 Sobic010G214200 Sobic005G090600--Sobic010G214200 Sobic005G218500 Sobic005G218500 Sobic005G090600--Sobic005G218500 Sobic005G090600--Sobic007G014600
Octagon: transcription factors


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