Gene annotation
Transcriptome id Sobic.001G511000.2,Sobic.001G511000.1
Synonym PTR3, ATPTR3, Sb01g047690
Functional annotation peptide transporter PTR3-A, putative, expressed
UniProt H0I4B9 , C5WYX8
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF103
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G46050 : peptide transporter 3
RAP-DB (Rice) LOC_Os03g04570.1 : peptide transporter PTR3-A, putative, expressed
MaizeGDB (Corn) Zm00025a000541 , Zm00025a006660 , Zm00025a017653 , Zm00025a006658
Brachypodium KQK02639 , PNT67517 , PNT67518 , KQJ88780 , KQJ97033 , KQJ97032 , KQJ97031 , KQK23746 , KQK02641 , KQK02640 , KQK02642
Barley HORVU1Hr1G039670.4 , HORVU4Hr1G083650.2 , HORVU4Hr1G083650.3 , HORVU4Hr1G083650.1 , HORVU4Hr1G083650.6 , HORVU4Hr1G083650.7 , HORVU4Hr1G083650.4 , HORVU4Hr1G083650.5 , HORVU4Hr1G083650.8 , HORVU1Hr1G039720.10 , HORVU1Hr1G039720.11 , HORVU1Hr1G039720.12 , HORVU1Hr1G039720.13 , HORVU1Hr1G039720.14 , HORVU1Hr1G039720.15 , HORVU1Hr1G039720.16 , HORVU1Hr1G039720.17 , HORVU3Hr1G010570.8 , HORVU3Hr1G010570.4 , HORVU3Hr1G010570.5 , HORVU3Hr1G010570.6 , HORVU3Hr1G010570.7 , HORVU3Hr1G010570.1 , HORVU3Hr1G010570.2 , HORVU3Hr1G010570.3 , HORVU1Hr1G039670.8 , HORVU1Hr1G039670.9 , HORVU1Hr1G039670.1 , HORVU1Hr1G039670.2 , HORVU1Hr1G039670.3 , HORVU1Hr1G039670.5 , HORVU1Hr1G039670.6 , HORVU1Hr1G039670.7 , HORVU6Hr1G008680.1 , HORVU1Hr1G039720.8 , HORVU1Hr1G039720.9 , HORVU1Hr1G039720.2 , HORVU1Hr1G039720.3 , HORVU1Hr1G039720.1 , HORVU1Hr1G039720.6 , HORVU1Hr1G039720.7 , HORVU1Hr1G039720.4 , HORVU1Hr1G039720.5
Wheat TraesCS1A02G150400 , TraesCS3A02G056400 , TraesCS6B02G056500 , TraesCS1B02G168000 , TraesCS6A02G041300 , TraesCS3D02G189500 , TraesCS3B02G069100 , TraesCS1D02G147200 , TraesCS1D02G147400 , TraesCS3D02G056300 , TraesCS4D02G335100 , TraesCS3A02G185600 , TraesCS3B02G215200 , TraesCS1A02G150200 , TraesCS1B02G168100 , TraesCS4B02G338600 , TraesCS5A02G508500 , TraesCS6D02G047600
Populus -


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cDNA sequences
Sobic.001G511000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
2 Sobic.010G280100 expressed protein -
3 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -
4 Sobic.007G054100 stress-induced protein, putative, expressed -
5 Sobic.003G074500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
6 Sobic.009G198900 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
7 Sobic.001G053900 nodulin, putative, expressed -
8 Sobic.004G291800 - -
9 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
10 Sobic.003G174450 - -
11 Sobic.001G368400 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
12 Sobic.007G130100 armadillo/beta-catenin repeat family protein, putative, expressed -
13 Sobic.004G020401 - -
14 Sobic.007G112900 - -
15 Sobic.003G115700 lipase, putative, expressed -
16 Sobic.010G172200 cytochrome P450, putative, expressed -
17 Sobic.002G425300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
18 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
19 Sobic.001G372700 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
20 Sobic.001G191100 OsFBX157 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G511000 Sobic001G511000 Sobic004G096300 Sobic004G096300 Sobic001G511000--Sobic004G096300 Sobic010G280100 Sobic010G280100 Sobic001G511000--Sobic010G280100 Sobic002G226000 Sobic002G226000 Sobic001G511000--Sobic002G226000 Sobic007G054100 Sobic007G054100 Sobic001G511000--Sobic007G054100 Sobic003G074500 Sobic003G074500 Sobic001G511000--Sobic003G074500 Sobic009G198900 Sobic009G198900 Sobic001G511000--Sobic009G198900 Sobic001G053900 Sobic001G053900 Sobic001G511000--Sobic001G053900 Sobic004G291800 Sobic004G291800 Sobic001G511000--Sobic004G291800 Sobic003G324000 Sobic003G324000 Sobic001G511000--Sobic003G324000 Sobic010G172200 Sobic010G172200 Sobic004G096300--Sobic010G172200 Sobic001G293800 Sobic001G293800 Sobic004G096300--Sobic001G293800 Sobic001G377000 Sobic001G377000 Sobic004G096300--Sobic001G377000 Sobic009G213400 Sobic009G213400 Sobic004G096300--Sobic009G213400 Sobic003G264901 Sobic003G264901 Sobic004G096300--Sobic003G264901 Sobic006G053700 Sobic006G053700 Sobic004G096300--Sobic006G053700 Sobic004G096300--Sobic001G053900 Sobic007G014600 Sobic007G014600 Sobic004G096300--Sobic007G014600 Sobic008G152200 Sobic008G152200 Sobic004G096300--Sobic008G152200 Sobic010G280100--Sobic009G198900 Sobic004G119000 Sobic004G119000 Sobic010G280100--Sobic004G119000 Sobic010G280100--Sobic003G324000 Sobic007G052900 Sobic007G052900 Sobic010G280100--Sobic007G052900 Sobic008G136200 Sobic008G136200 Sobic010G280100--Sobic008G136200 Sobic009G087800 Sobic009G087800 Sobic010G280100--Sobic009G087800 Sobic007G205800 Sobic007G205800 Sobic010G280100--Sobic007G205800 Sobic001G368400 Sobic001G368400 Sobic010G280100--Sobic001G368400 Sobic006G273200 Sobic006G273200 Sobic010G280100--Sobic006G273200 Sobic002G226000--Sobic009G198900 Sobic002G226000--Sobic003G324000 Sobic007G148200 Sobic007G148200 Sobic002G226000--Sobic007G148200 Sobic001G543800 Sobic001G543800 Sobic002G226000--Sobic001G543800 Sobic001G194900 Sobic001G194900 Sobic002G226000--Sobic001G194900 Sobic004G153400 Sobic004G153400 Sobic002G226000--Sobic004G153400 Sobic002G226000--Sobic010G280100 Sobic006G152600 Sobic006G152600 Sobic002G226000--Sobic006G152600 Sobic009G180200 Sobic009G180200 Sobic002G226000--Sobic009G180200 Sobic003G308700 Sobic003G308700 Sobic007G054100--Sobic003G308700 Sobic006G042200 Sobic006G042200 Sobic007G054100--Sobic006G042200 Sobic002G273700 Sobic002G273700 Sobic007G054100--Sobic002G273700 Sobic002G073900 Sobic002G073900 Sobic007G054100--Sobic002G073900 Sobic003G153800 Sobic003G153800 Sobic007G054100--Sobic003G153800 Sobic002G174900 Sobic002G174900 Sobic007G054100--Sobic002G174900 Sobic002G187801 Sobic002G187801 Sobic007G054100--Sobic002G187801 Sobic007G054100--Sobic004G096300 Sobic005G090600 Sobic005G090600 Sobic007G054100--Sobic005G090600 Sobic002G425300 Sobic002G425300 Sobic003G074500--Sobic002G425300 Sobic003G074500--Sobic001G511000 Sobic003G074500--Sobic001G377000 Sobic003G074500--Sobic004G096300 Sobic003G074500--Sobic007G148200 Sobic007G071000 Sobic007G071000 Sobic003G074500--Sobic007G071000 Sobic003G126100 Sobic003G126100 Sobic003G074500--Sobic003G126100 Sobic005G072500 Sobic005G072500 Sobic003G074500--Sobic005G072500 Sobic003G074500--Sobic002G226000 Sobic009G198900--Sobic003G324000 Sobic009G198900--Sobic009G087800 Sobic009G198900--Sobic010G280100 Sobic003G258400 Sobic003G258400 Sobic009G198900--Sobic003G258400 Sobic005G187200 Sobic005G187200 Sobic009G198900--Sobic005G187200 Sobic007G054000 Sobic007G054000 Sobic009G198900--Sobic007G054000 Sobic009G110366 Sobic009G110366 Sobic009G198900--Sobic009G110366 Sobic009G198900--Sobic007G205800 Sobic006G196000 Sobic006G196000 Sobic009G198900--Sobic006G196000 Sobic001G053900--Sobic004G096300 Sobic002G376700 Sobic002G376700 Sobic001G053900--Sobic002G376700 Sobic010G214000 Sobic010G214000 Sobic001G053900--Sobic010G214000 Sobic001G291200 Sobic001G291200 Sobic001G053900--Sobic001G291200 Sobic001G053900--Sobic003G264901 Sobic004G113800 Sobic004G113800 Sobic001G053900--Sobic004G113800 Sobic006G172900 Sobic006G172900 Sobic001G053900--Sobic006G172900 Sobic001G053900--Sobic008G152200 Sobic001G053900--Sobic007G071000 Sobic004G020401 Sobic004G020401 Sobic004G291800--Sobic004G020401 Sobic009G197200 Sobic009G197200 Sobic004G291800--Sobic009G197200 Sobic004G291800--Sobic009G110366 Sobic002G212800 Sobic002G212800 Sobic004G291800--Sobic002G212800 Sobic007G112900 Sobic007G112900 Sobic004G291800--Sobic007G112900 Sobic009G109450 Sobic009G109450 Sobic004G291800--Sobic009G109450 Sobic007G130100 Sobic007G130100 Sobic004G291800--Sobic007G130100 Sobic006G273100 Sobic006G273100 Sobic004G291800--Sobic006G273100 Sobic003G057800 Sobic003G057800 Sobic004G291800--Sobic003G057800 Sobic003G324000--Sobic009G198900 Sobic003G324000--Sobic001G368400 Sobic003G324000--Sobic005G187200 Sobic010G056200 Sobic010G056200 Sobic003G324000--Sobic010G056200 Sobic001G479500 Sobic001G479500 Sobic003G324000--Sobic001G479500 Sobic003G324000--Sobic010G280100 Sobic003G324000--Sobic007G205800 Sobic003G324000--Sobic009G087800 Sobic003G324000--Sobic003G258400
Octagon: transcription factors


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