Gene annotation
| Transcriptome id | Sobic.003G115700.1 |
|---|---|
| Synonym | Sb03g009750 |
| Functional annotation | lipase, putative, expressed |
| UniProt | A0A1W0VWV0 |
| Pfam | PF01764 |
| Panther DB | PTHR21493 PTHR21493:SF117 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0006629; lipid metabolic process |
Orthologs (automatic annotation)
| TAIR | AT1G02660 : alpha/beta-Hydrolases superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g15000.1 : lipase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a035339 , Zm00025a018263 |
| Brachypodium | KQK03637 |
| Barley | HORVU3Hr1G034980.9 , HORVU3Hr1G034980.8 , HORVU3Hr1G034980.7 , HORVU3Hr1G034980.6 , HORVU3Hr1G034980.5 , HORVU3Hr1G034980.4 , HORVU3Hr1G034980.1 , HORVU3Hr1G034980.22 , HORVU3Hr1G034980.23 , HORVU3Hr1G034980.20 , HORVU3Hr1G034980.21 , HORVU3Hr1G034980.3 , HORVU3Hr1G034980.2 , HORVU3Hr1G034980.17 , HORVU3Hr1G034980.16 , HORVU3Hr1G034980.15 , HORVU3Hr1G034980.14 , HORVU3Hr1G034980.13 , HORVU3Hr1G034980.12 , HORVU3Hr1G034980.11 , HORVU3Hr1G034980.10 , HORVU3Hr1G034980.19 , HORVU3Hr1G034980.18 |
| Wheat | TraesCS3B02G203700 , TraesCS3A02G173000 , TraesCS3D02G179200 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G479500 | dihydroflavonol-4-reductase, putative, expressed | K15891: NAD+-dependent farnesol dehydrogenase |
| 2 | Sobic.010G248200 | KID-containing protein, putative, expressed | - |
| 3 | Sobic.010G001600 | homogentisate 1,2-dioxygenase, putative, expressed | K00451: HGD, homogentisate 1,2-dioxygenase |
| 4 | Sobic.008G160700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed | K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit |
| 5 | Sobic.003G057800 | rho termination factor, N-terminal domain containing protein, expressed | - |
| 6 | Sobic.001G194900 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed | K00311: electron-transferring-flavoprotein dehydrogenase |
| 7 | Sobic.003G324000 | 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed | K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase |
| 8 | Sobic.001G372700 | B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed | - |
| 9 | Sobic.009G198900 | trehalose synthase, putative, expressed | K16055: trehalose 6-phosphate synthase/phosphatase |
| 10 | Sobic.005G130200 | - | - |
| 11 | Sobic.001G543900 | H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed | K01535: PMA1, H+-transporting ATPase |
| 12 | Sobic.006G204200 | putrescine-binding periplasmic protein-related, putative, expressed | - |
| 13 | Sobic.004G143700 | protein phosphatase 2C, putative, expressed | - |
| 14 | Sobic.010G173800 | beta-galactosidase precursor, putative, expressed | - |
| 15 | Sobic.004G020401 | - | - |
| 16 | Sobic.002G284200 | peroxisomal multifunctional enzyme type 2, putative, expressed | - |
| 17 | Sobic.007G211000 | helix-loop-helix DNA-binding domain containing protein, expressed | - |
| 18 | Sobic.001G511000 | peptide transporter PTR3-A, putative, expressed | - |
| 19 | Sobic.009G180200 | SNF1-related protein kinase regulatory subunit beta-1, putative, expressed | K07199: 5'-AMP-activated protein kinase, regulatory beta subunit |
| 20 | Sobic.004G291800 | - | - |
Gene co-expression network
Octagon: transcription factors
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