Gene annotation
Transcriptome id Sobic.004G020401.1
Synonym -
Functional annotation -
UniProt A0A1Z5RKZ3
Pfam -
Panther DB PTHR10891 PTHR10891:SF626
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g03020.1 : EF hand family protein, putative, expressed
MaizeGDB (Corn) Zm00025a034938
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G291800 - -
2 Sobic.009G110366 - -
3 Sobic.009G109450 - -
4 Sobic.009G197200 - -
5 Sobic.003G057800 rho termination factor, N-terminal domain containing protein, expressed -
6 Sobic.007G130100 armadillo/beta-catenin repeat family protein, putative, expressed -
7 Sobic.001G479500 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
8 Sobic.003G357500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.008G161401 - -
10 Sobic.009G180200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
11 Sobic.002G376800 EF hand family protein, putative -
12 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
13 Sobic.003G357600 laccase precursor protein, putative, expressed K05909: laccase
14 Sobic.009G002500 polygalacturonase inhibitor precursor, putative, expressed -
15 Sobic.005G121800 expressed protein -
16 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
17 Sobic.003G258400 splicing factor-related, putative, expressed -
18 Sobic.006G196000 expressed protein -
19 Sobic.009G198900 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
20 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic004G020401 Sobic004G020401 Sobic004G291800 Sobic004G291800 Sobic004G020401--Sobic004G291800 Sobic009G110366 Sobic009G110366 Sobic004G020401--Sobic009G110366 Sobic009G109450 Sobic009G109450 Sobic004G020401--Sobic009G109450 Sobic009G197200 Sobic009G197200 Sobic004G020401--Sobic009G197200 Sobic003G057800 Sobic003G057800 Sobic004G020401--Sobic003G057800 Sobic007G130100 Sobic007G130100 Sobic004G020401--Sobic007G130100 Sobic001G479500 Sobic001G479500 Sobic004G020401--Sobic001G479500 Sobic003G357500 Sobic003G357500 Sobic004G020401--Sobic003G357500 Sobic008G161401 Sobic008G161401 Sobic004G020401--Sobic008G161401 Sobic004G291800--Sobic004G020401 Sobic004G291800--Sobic009G197200 Sobic004G291800--Sobic009G110366 Sobic002G212800 Sobic002G212800 Sobic004G291800--Sobic002G212800 Sobic007G112900 Sobic007G112900 Sobic004G291800--Sobic007G112900 Sobic004G291800--Sobic009G109450 Sobic004G291800--Sobic007G130100 Sobic006G273100 Sobic006G273100 Sobic004G291800--Sobic006G273100 Sobic004G291800--Sobic003G057800 Sobic007G073400 Sobic007G073400 Sobic009G110366--Sobic007G073400 Sobic009G110366--Sobic004G020401 Sobic009G110366--Sobic009G109450 Sobic003G258400 Sobic003G258400 Sobic009G110366--Sobic003G258400 Sobic006G196000 Sobic006G196000 Sobic009G110366--Sobic006G196000 Sobic004G143700 Sobic004G143700 Sobic009G110366--Sobic004G143700 Sobic009G110366--Sobic004G291800 Sobic009G180200 Sobic009G180200 Sobic009G110366--Sobic009G180200 Sobic009G198900 Sobic009G198900 Sobic009G110366--Sobic009G198900 Sobic009G078500 Sobic009G078500 Sobic009G109450--Sobic009G078500 Sobic004G199600 Sobic004G199600 Sobic009G109450--Sobic004G199600 Sobic009G109450--Sobic009G180200 Sobic005G130100 Sobic005G130100 Sobic009G109450--Sobic005G130100 Sobic009G231300 Sobic009G231300 Sobic009G109450--Sobic009G231300 Sobic009G109450--Sobic006G196000 Sobic005G121800 Sobic005G121800 Sobic009G109450--Sobic005G121800 Sobic002G376900 Sobic002G376900 Sobic009G109450--Sobic002G376900 Sobic009G109450--Sobic009G110366 Sobic009G197200--Sobic004G291800 Sobic009G197200--Sobic004G020401 Sobic009G197200--Sobic009G110366 Sobic009G197200--Sobic009G109450 Sobic008G068400 Sobic008G068400 Sobic009G197200--Sobic008G068400 Sobic009G197200--Sobic006G273100 Sobic008G091671 Sobic008G091671 Sobic009G197200--Sobic008G091671 Sobic010G144100 Sobic010G144100 Sobic009G197200--Sobic010G144100 Sobic009G197200--Sobic002G212800 Sobic003G057800--Sobic001G479500 Sobic003G057800--Sobic003G357500 Sobic010G248200 Sobic010G248200 Sobic003G057800--Sobic010G248200 Sobic003G057800--Sobic008G161401 Sobic004G212800 Sobic004G212800 Sobic003G057800--Sobic004G212800 Sobic005G130200 Sobic005G130200 Sobic003G057800--Sobic005G130200 Sobic003G057800--Sobic007G073400 Sobic004G016500 Sobic004G016500 Sobic003G057800--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic003G057800--Sobic001G046600 Sobic007G130100--Sobic004G020401 Sobic004G315800 Sobic004G315800 Sobic007G130100--Sobic004G315800 Sobic007G130100--Sobic004G291800 Sobic003G324000 Sobic003G324000 Sobic007G130100--Sobic003G324000 Sobic010G280100 Sobic010G280100 Sobic007G130100--Sobic010G280100 Sobic007G130100--Sobic009G198900 Sobic007G130100--Sobic003G057800 Sobic006G048775 Sobic006G048775 Sobic007G130100--Sobic006G048775 Sobic007G130100--Sobic009G110366 Sobic001G479500--Sobic003G057800 Sobic001G479500--Sobic005G130200 Sobic001G479500--Sobic010G248200 Sobic001G479500--Sobic008G161401 Sobic009G156000 Sobic009G156000 Sobic001G479500--Sobic009G156000 Sobic001G543900 Sobic001G543900 Sobic001G479500--Sobic001G543900 Sobic005G187200 Sobic005G187200 Sobic001G479500--Sobic005G187200 Sobic002G283300 Sobic002G283300 Sobic001G479500--Sobic002G283300 Sobic001G479500--Sobic004G212800 Sobic003G357600 Sobic003G357600 Sobic003G357500--Sobic003G357600 Sobic003G357500--Sobic003G057800 Sobic003G357500--Sobic008G161401 Sobic003G357500--Sobic007G073400 Sobic003G357500--Sobic010G248200 Sobic003G357500--Sobic004G212800 Sobic003G357500--Sobic005G130200 Sobic003G357500--Sobic006G196000 Sobic003G357500--Sobic001G479500 Sobic008G161401--Sobic010G248200 Sobic008G161401--Sobic004G212800 Sobic008G161401--Sobic007G073400 Sobic008G161401--Sobic005G130200 Sobic008G161401--Sobic003G057800 Sobic008G161401--Sobic003G357500 Sobic008G161401--Sobic009G156000 Sobic002G108800 Sobic002G108800 Sobic008G161401--Sobic002G108800 Sobic008G161401--Sobic001G479500
Octagon: transcription factors


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