Gene annotation
Transcriptome id Sobic.003G074500.1
Synonym Sb03g006290,
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
Lecithin: cholesterol acyltransferase family protein (At) (PubMedID : 27208977)
lecithin:cholesterol acyltransferase, putative, expressed
UniProt C5XQ26
Pfam PF02450
Panther DB PTHR11440 PTHR11440:SF52
NCBI CDD KOG2369; Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase
KEGG Orthology K06129; lysophospholipase III
Gene Ontology GO:0008374; O-acyltransferase activity GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT1G27480 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g37654.1 : lecithin:cholesterol acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a023482
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G074500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G425300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
2 Sobic.001G511000 peptide transporter PTR3-A, putative, expressed -
3 Sobic.001G377000 auxin-repressed protein, putative, expressed -
4 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
5 Sobic.007G148200 auxin-repressed protein, putative, expressed -
6 Sobic.007G071000 no apical meristem protein, putative, expressed -
7 Sobic.003G126100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolase, family 31, putative, expressed -
8 Sobic.005G072500 amino acid transporter, putative, expressed -
9 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -
10 Sobic.003G264901 - -
11 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
12 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
13 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
14 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
15 Sobic.006G053700 ACT domain containing protein, expressed -
16 Sobic.003G010300 cytochrome P450, putative, expressed -
17 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
18 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.009G094800 sugar porter, putative, expressed -
20 Sobic.004G249500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -


Gene co-expression network
sample Sobic003G074500 Sobic003G074500 Sobic002G425300 Sobic002G425300 Sobic003G074500--Sobic002G425300 Sobic001G511000 Sobic001G511000 Sobic003G074500--Sobic001G511000 Sobic001G377000 Sobic001G377000 Sobic003G074500--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic003G074500--Sobic004G096300 Sobic007G148200 Sobic007G148200 Sobic003G074500--Sobic007G148200 Sobic007G071000 Sobic007G071000 Sobic003G074500--Sobic007G071000 Sobic003G126100 Sobic003G126100 Sobic003G074500--Sobic003G126100 Sobic005G072500 Sobic005G072500 Sobic003G074500--Sobic005G072500 Sobic002G226000 Sobic002G226000 Sobic003G074500--Sobic002G226000 Sobic002G425300--Sobic003G074500 Sobic010G273600 Sobic010G273600 Sobic002G425300--Sobic010G273600 Sobic009G107500 Sobic009G107500 Sobic002G425300--Sobic009G107500 Sobic002G425300--Sobic007G071000 Sobic003G264901 Sobic003G264901 Sobic002G425300--Sobic003G264901 Sobic002G425300--Sobic001G511000 Sobic004G291800 Sobic004G291800 Sobic002G425300--Sobic004G291800 Sobic009G082200 Sobic009G082200 Sobic002G425300--Sobic009G082200 Sobic001G053900 Sobic001G053900 Sobic002G425300--Sobic001G053900 Sobic001G511000--Sobic004G096300 Sobic010G280100 Sobic010G280100 Sobic001G511000--Sobic010G280100 Sobic001G511000--Sobic002G226000 Sobic007G054100 Sobic007G054100 Sobic001G511000--Sobic007G054100 Sobic001G511000--Sobic003G074500 Sobic009G198900 Sobic009G198900 Sobic001G511000--Sobic009G198900 Sobic001G511000--Sobic001G053900 Sobic001G511000--Sobic004G291800 Sobic003G324000 Sobic003G324000 Sobic001G511000--Sobic003G324000 Sobic001G191200 Sobic001G191200 Sobic001G377000--Sobic001G191200 Sobic009G213400 Sobic009G213400 Sobic001G377000--Sobic009G213400 Sobic001G377000--Sobic004G096300 Sobic003G406700 Sobic003G406700 Sobic001G377000--Sobic003G406700 Sobic001G377000--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic001G377000--Sobic001G293800 Sobic001G377000--Sobic007G071000 Sobic010G172200 Sobic010G172200 Sobic001G377000--Sobic010G172200 Sobic001G377000--Sobic003G264901 Sobic004G096300--Sobic010G172200 Sobic004G096300--Sobic001G293800 Sobic004G096300--Sobic001G377000 Sobic004G096300--Sobic009G213400 Sobic004G096300--Sobic003G264901 Sobic006G053700 Sobic006G053700 Sobic004G096300--Sobic006G053700 Sobic004G096300--Sobic001G053900 Sobic007G014600 Sobic007G014600 Sobic004G096300--Sobic007G014600 Sobic008G152200 Sobic008G152200 Sobic004G096300--Sobic008G152200 Sobic007G148200--Sobic001G377000 Sobic004G275200 Sobic004G275200 Sobic007G148200--Sobic004G275200 Sobic007G148200--Sobic002G226000 Sobic006G152600 Sobic006G152600 Sobic007G148200--Sobic006G152600 Sobic007G148200--Sobic001G293800 Sobic007G120401 Sobic007G120401 Sobic007G148200--Sobic007G120401 Sobic004G153400 Sobic004G153400 Sobic007G148200--Sobic004G153400 Sobic002G046800 Sobic002G046800 Sobic007G148200--Sobic002G046800 Sobic004G153501 Sobic004G153501 Sobic007G148200--Sobic004G153501 Sobic007G071000--Sobic008G152200 Sobic007G071000--Sobic001G377000 Sobic007G071000--Sobic004G096300 Sobic007G071000--Sobic003G264901 Sobic007G071000--Sobic010G172200 Sobic007G071000--Sobic001G293800 Sobic003G153800 Sobic003G153800 Sobic007G071000--Sobic003G153800 Sobic009G205600 Sobic009G205600 Sobic007G071000--Sobic009G205600 Sobic007G071000--Sobic001G053900 Sobic006G174600 Sobic006G174600 Sobic003G126100--Sobic006G174600 Sobic003G126100--Sobic003G074500 Sobic010G210700 Sobic010G210700 Sobic003G126100--Sobic010G210700 Sobic009G085900 Sobic009G085900 Sobic003G126100--Sobic009G085900 Sobic003G010300 Sobic003G010300 Sobic003G126100--Sobic003G010300 Sobic005G133166 Sobic005G133166 Sobic003G126100--Sobic005G133166 Sobic003G126100--Sobic006G053700 Sobic003G126100--Sobic009G213400 Sobic009G154600 Sobic009G154600 Sobic003G126100--Sobic009G154600 Sobic005G072500--Sobic002G046800 Sobic006G159900 Sobic006G159900 Sobic005G072500--Sobic006G159900 Sobic010G001600 Sobic010G001600 Sobic005G072500--Sobic010G001600 Sobic001G543800 Sobic001G543800 Sobic005G072500--Sobic001G543800 Sobic001G294100 Sobic001G294100 Sobic005G072500--Sobic001G294100 Sobic006G028300 Sobic006G028300 Sobic005G072500--Sobic006G028300 Sobic001G194900 Sobic001G194900 Sobic005G072500--Sobic001G194900 Sobic005G072500--Sobic003G324000 Sobic005G072500--Sobic003G074500 Sobic002G226000--Sobic009G198900 Sobic002G226000--Sobic003G324000 Sobic002G226000--Sobic007G148200 Sobic002G226000--Sobic001G543800 Sobic002G226000--Sobic001G194900 Sobic002G226000--Sobic004G153400 Sobic002G226000--Sobic010G280100 Sobic002G226000--Sobic006G152600 Sobic009G180200 Sobic009G180200 Sobic002G226000--Sobic009G180200
Octagon: transcription factors


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