Gene annotation
Transcriptome id Sobic.003G010300.1
Synonym Sb03g001080, CYP71A24
Functional annotation cytochrome P450, putative, expressed
UniProt C5XK93
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF134
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT3G48280 : cytochrome P450, family 71, subfamily A, polypeptide 25
RAP-DB (Rice) LOC_Os01g12740.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a022839 , Zm00025a006335 , Zm00025a035971 , Zm00025a035970 , Zm00025a035972 , Zm00025a017435
Brachypodium KQK12282 , KQK12293 , KQK03395 , KQJ97404
Barley HORVU1Hr1G045500.1 , HORVU1Hr1G045500.2 , HORVU3Hr1G030950.1
Wheat TraesCS1A02G177800 , TraesCS3B02G582700
Populus -


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cDNA sequences
Sobic.003G010300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G022600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
2 Sobic.010G192800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.009G016600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.002G140700 triacylglycerol lipase 1 precursor, putative, expressed -
5 Sobic.006G076800 serine/threonine-protein kinase receptor precursor, putative, expressed -
6 Sobic.007G063300 reductase, putative, expressed -
7 Sobic.004G059300 PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
8 Sobic.007G135000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
9 Sobic.003G074500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
10 Sobic.009G148900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
11 Sobic.001G469500 transporter family protein, putative, expressed -
12 Sobic.006G174600 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
13 Sobic.009G211000 phosphotransferase, putative, expressed K14156: choline/ethanolamine kinase
14 Sobic.003G126100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolase, family 31, putative, expressed -
15 Sobic.003G097100 receptor kinase ORK10, putative, expressed -
16 Sobic.003G421700 "beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
17 Sobic.003G404200 expressed protein -
18 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
19 Sobic.001G320200 phospholipase D, putative, expressed K01115: phospholipase D1/2
20 Sobic.009G226600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wax synthase, putative, expressed -


Gene co-expression network
sample Sobic003G010300 Sobic003G010300 Sobic003G022600 Sobic003G022600 Sobic003G010300--Sobic003G022600 Sobic010G192800 Sobic010G192800 Sobic003G010300--Sobic010G192800 Sobic009G016600 Sobic009G016600 Sobic003G010300--Sobic009G016600 Sobic002G140700 Sobic002G140700 Sobic003G010300--Sobic002G140700 Sobic006G076800 Sobic006G076800 Sobic003G010300--Sobic006G076800 Sobic007G063300 Sobic007G063300 Sobic003G010300--Sobic007G063300 Sobic004G059300 Sobic004G059300 Sobic003G010300--Sobic004G059300 Sobic007G135000 Sobic007G135000 Sobic003G010300--Sobic007G135000 Sobic003G074500 Sobic003G074500 Sobic003G010300--Sobic003G074500 Sobic003G022600--Sobic007G135000 Sobic003G022600--Sobic003G010300 Sobic003G097100 Sobic003G097100 Sobic003G022600--Sobic003G097100 Sobic001G469500 Sobic001G469500 Sobic003G022600--Sobic001G469500 Sobic006G242000 Sobic006G242000 Sobic003G022600--Sobic006G242000 Sobic003G039700 Sobic003G039700 Sobic003G022600--Sobic003G039700 Sobic007G157100 Sobic007G157100 Sobic003G022600--Sobic007G157100 Sobic003G022600--Sobic009G016600 Sobic010G137300 Sobic010G137300 Sobic003G022600--Sobic010G137300 Sobic010G192800--Sobic009G016600 Sobic001G351800 Sobic001G351800 Sobic010G192800--Sobic001G351800 Sobic003G404200 Sobic003G404200 Sobic010G192800--Sobic003G404200 Sobic010G192800--Sobic007G063300 Sobic002G338100 Sobic002G338100 Sobic010G192800--Sobic002G338100 Sobic009G034700 Sobic009G034700 Sobic010G192800--Sobic009G034700 Sobic010G192800--Sobic001G469500 Sobic003G365000 Sobic003G365000 Sobic010G192800--Sobic003G365000 Sobic003G388251 Sobic003G388251 Sobic010G192800--Sobic003G388251 Sobic009G016600--Sobic010G192800 Sobic007G084300 Sobic007G084300 Sobic009G016600--Sobic007G084300 Sobic009G211000 Sobic009G211000 Sobic009G016600--Sobic009G211000 Sobic002G249300 Sobic002G249300 Sobic009G016600--Sobic002G249300 Sobic002G165140 Sobic002G165140 Sobic009G016600--Sobic002G165140 Sobic006G143000 Sobic006G143000 Sobic009G016600--Sobic006G143000 Sobic009G016600--Sobic007G063300 Sobic003G174301 Sobic003G174301 Sobic009G016600--Sobic003G174301 Sobic009G226600 Sobic009G226600 Sobic009G016600--Sobic009G226600 Sobic002G169900 Sobic002G169900 Sobic002G140700--Sobic002G169900 Sobic002G116800 Sobic002G116800 Sobic002G140700--Sobic002G116800 Sobic001G248300 Sobic001G248300 Sobic002G140700--Sobic001G248300 Sobic007G161800 Sobic007G161800 Sobic002G140700--Sobic007G161800 Sobic001G000200 Sobic001G000200 Sobic002G140700--Sobic001G000200 Sobic007G002300 Sobic007G002300 Sobic002G140700--Sobic007G002300 Sobic002G140700--Sobic009G211000 Sobic004G052900 Sobic004G052900 Sobic002G140700--Sobic004G052900 Sobic003G100800 Sobic003G100800 Sobic002G140700--Sobic003G100800 Sobic001G145700 Sobic001G145700 Sobic006G076800--Sobic001G145700 Sobic002G046800 Sobic002G046800 Sobic006G076800--Sobic002G046800 Sobic005G133200 Sobic005G133200 Sobic006G076800--Sobic005G133200 Sobic002G032700 Sobic002G032700 Sobic006G076800--Sobic002G032700 Sobic007G120401 Sobic007G120401 Sobic006G076800--Sobic007G120401 Sobic006G076800--Sobic002G140700 Sobic006G076800--Sobic003G010300 Sobic006G003400 Sobic006G003400 Sobic006G076800--Sobic006G003400 Sobic008G079300 Sobic008G079300 Sobic006G076800--Sobic008G079300 Sobic007G063300--Sobic002G165140 Sobic007G063300--Sobic010G192800 Sobic007G063300--Sobic009G016600 Sobic001G016700 Sobic001G016700 Sobic007G063300--Sobic001G016700 Sobic007G063300--Sobic006G143000 Sobic007G063300--Sobic004G059300 Sobic007G063300--Sobic002G249300 Sobic007G063300--Sobic007G084300 Sobic007G063300--Sobic003G404200 Sobic004G059300--Sobic007G063300 Sobic004G059300--Sobic006G143000 Sobic004G059300--Sobic007G084300 Sobic001G190300 Sobic001G190300 Sobic004G059300--Sobic001G190300 Sobic004G059300--Sobic001G016700 Sobic004G059300--Sobic001G248300 Sobic003G086900 Sobic003G086900 Sobic004G059300--Sobic003G086900 Sobic006G030600 Sobic006G030600 Sobic004G059300--Sobic006G030600 Sobic007G165600 Sobic007G165600 Sobic004G059300--Sobic007G165600 Sobic007G135000--Sobic003G097100 Sobic009G241300 Sobic009G241300 Sobic007G135000--Sobic009G241300 Sobic007G135000--Sobic001G469500 Sobic007G135000--Sobic003G022600 Sobic007G135000--Sobic003G039700 Sobic009G241400 Sobic009G241400 Sobic007G135000--Sobic009G241400 Sobic003G363100 Sobic003G363100 Sobic007G135000--Sobic003G363100 Sobic007G135000--Sobic006G242000 Sobic007G135000--Sobic010G192800 Sobic002G425300 Sobic002G425300 Sobic003G074500--Sobic002G425300 Sobic001G511000 Sobic001G511000 Sobic003G074500--Sobic001G511000 Sobic001G377000 Sobic001G377000 Sobic003G074500--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic003G074500--Sobic004G096300 Sobic007G148200 Sobic007G148200 Sobic003G074500--Sobic007G148200 Sobic007G071000 Sobic007G071000 Sobic003G074500--Sobic007G071000 Sobic003G126100 Sobic003G126100 Sobic003G074500--Sobic003G126100 Sobic005G072500 Sobic005G072500 Sobic003G074500--Sobic005G072500 Sobic002G226000 Sobic002G226000 Sobic003G074500--Sobic002G226000
Octagon: transcription factors


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