Gene annotation
Transcriptome id Sobic.003G404200.1
Synonym Sb03g043990
Functional annotation expressed protein
UniProt C5XGA1
Pfam -
Panther DB PTHR34280 PTHR34280:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27210 : -
RAP-DB (Rice) LOC_Os01g69100.1 : expressed protein
MaizeGDB (Corn) Zm00025a026271 , Zm00025a039306
Brachypodium KQK11238 , KQK11239
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G404200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G192800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G266400 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
3 Sobic.009G034700 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
4 Sobic.006G043600 cysteine proteinase 1 precursor, putative, expressed K01373: cathepsin F
5 Sobic.009G016600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.003G365000 cytochrome P450, putative, expressed -
7 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
8 Sobic.002G116800 expressed protein -
9 Sobic.004G337200 dehydrogenase, putative, expressed -
10 Sobic.002G159700 - -
11 Sobic.010G113000 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
12 Sobic.007G063300 reductase, putative, expressed -
13 Sobic.005G024200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.37 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
14 Sobic.003G388251 - K01166: ribonuclease T2
15 Sobic.010G205500 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
16 Sobic.010G242400 TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.003G070800 gamma-glutamyltranspeptidase 1 precursor, putative, expressed K18592: GGT1_5, gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase
18 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
19 Sobic.005G032300 ubiquitin-like protein 5, putative, expressed K13113: UBL5, ubiquitin-like protein 5
20 Sobic.001G320200 phospholipase D, putative, expressed K01115: phospholipase D1/2


Gene co-expression network
sample Sobic003G404200 Sobic003G404200 Sobic010G192800 Sobic010G192800 Sobic003G404200--Sobic010G192800 Sobic004G266400 Sobic004G266400 Sobic003G404200--Sobic004G266400 Sobic009G034700 Sobic009G034700 Sobic003G404200--Sobic009G034700 Sobic006G043600 Sobic006G043600 Sobic003G404200--Sobic006G043600 Sobic009G016600 Sobic009G016600 Sobic003G404200--Sobic009G016600 Sobic003G365000 Sobic003G365000 Sobic003G404200--Sobic003G365000 Sobic001G016700 Sobic001G016700 Sobic003G404200--Sobic001G016700 Sobic002G116800 Sobic002G116800 Sobic003G404200--Sobic002G116800 Sobic004G337200 Sobic004G337200 Sobic003G404200--Sobic004G337200 Sobic010G192800--Sobic009G016600 Sobic001G351800 Sobic001G351800 Sobic010G192800--Sobic001G351800 Sobic010G192800--Sobic003G404200 Sobic007G063300 Sobic007G063300 Sobic010G192800--Sobic007G063300 Sobic002G338100 Sobic002G338100 Sobic010G192800--Sobic002G338100 Sobic010G192800--Sobic009G034700 Sobic001G469500 Sobic001G469500 Sobic010G192800--Sobic001G469500 Sobic010G192800--Sobic003G365000 Sobic003G388251 Sobic003G388251 Sobic010G192800--Sobic003G388251 Sobic004G266400--Sobic006G043600 Sobic006G204900 Sobic006G204900 Sobic004G266400--Sobic006G204900 Sobic002G159700 Sobic002G159700 Sobic004G266400--Sobic002G159700 Sobic004G266400--Sobic001G016700 Sobic010G224000 Sobic010G224000 Sobic004G266400--Sobic010G224000 Sobic003G322700 Sobic003G322700 Sobic004G266400--Sobic003G322700 Sobic001G462500 Sobic001G462500 Sobic004G266400--Sobic001G462500 Sobic001G121200 Sobic001G121200 Sobic004G266400--Sobic001G121200 Sobic001G207400 Sobic001G207400 Sobic004G266400--Sobic001G207400 Sobic005G178100 Sobic005G178100 Sobic009G034700--Sobic005G178100 Sobic009G034700--Sobic003G388251 Sobic004G124200 Sobic004G124200 Sobic009G034700--Sobic004G124200 Sobic001G474500 Sobic001G474500 Sobic009G034700--Sobic001G474500 Sobic001G069900 Sobic001G069900 Sobic009G034700--Sobic001G069900 Sobic006G028900 Sobic006G028900 Sobic009G034700--Sobic006G028900 Sobic008G079300 Sobic008G079300 Sobic009G034700--Sobic008G079300 Sobic001G325200 Sobic001G325200 Sobic009G034700--Sobic001G325200 Sobic001G015500 Sobic001G015500 Sobic009G034700--Sobic001G015500 Sobic006G043600--Sobic004G266400 Sobic010G138000 Sobic010G138000 Sobic006G043600--Sobic010G138000 Sobic004G065000 Sobic004G065000 Sobic006G043600--Sobic004G065000 Sobic009G133500 Sobic009G133500 Sobic006G043600--Sobic009G133500 Sobic006G043600--Sobic010G224000 Sobic006G087700 Sobic006G087700 Sobic006G043600--Sobic006G087700 Sobic006G043600--Sobic001G121200 Sobic010G001500 Sobic010G001500 Sobic006G043600--Sobic010G001500 Sobic006G043600--Sobic006G204900 Sobic009G016600--Sobic010G192800 Sobic007G084300 Sobic007G084300 Sobic009G016600--Sobic007G084300 Sobic009G211000 Sobic009G211000 Sobic009G016600--Sobic009G211000 Sobic002G249300 Sobic002G249300 Sobic009G016600--Sobic002G249300 Sobic002G165140 Sobic002G165140 Sobic009G016600--Sobic002G165140 Sobic006G143000 Sobic006G143000 Sobic009G016600--Sobic006G143000 Sobic009G016600--Sobic007G063300 Sobic003G174301 Sobic003G174301 Sobic009G016600--Sobic003G174301 Sobic009G226600 Sobic009G226600 Sobic009G016600--Sobic009G226600 Sobic003G365000--Sobic009G034700 Sobic003G365000--Sobic004G124200 Sobic003G365000--Sobic003G388251 Sobic003G116900 Sobic003G116900 Sobic003G365000--Sobic003G116900 Sobic003G365000--Sobic010G192800 Sobic003G365000--Sobic005G178100 Sobic001G130000 Sobic001G130000 Sobic003G365000--Sobic001G130000 Sobic003G365000--Sobic003G404200 Sobic001G320200 Sobic001G320200 Sobic003G365000--Sobic001G320200 Sobic002G430000 Sobic002G430000 Sobic001G016700--Sobic002G430000 Sobic002G111000 Sobic002G111000 Sobic001G016700--Sobic002G111000 Sobic001G016700--Sobic001G207400 Sobic010G139600 Sobic010G139600 Sobic001G016700--Sobic010G139600 Sobic003G110000 Sobic003G110000 Sobic001G016700--Sobic003G110000 Sobic001G390800 Sobic001G390800 Sobic001G016700--Sobic001G390800 Sobic001G016700--Sobic006G204900 Sobic001G016700--Sobic003G322700 Sobic003G086900 Sobic003G086900 Sobic001G016700--Sobic003G086900 Sobic007G189500 Sobic007G189500 Sobic002G116800--Sobic007G189500 Sobic006G213500 Sobic006G213500 Sobic002G116800--Sobic006G213500 Sobic002G140700 Sobic002G140700 Sobic002G116800--Sobic002G140700 Sobic008G003900 Sobic008G003900 Sobic002G116800--Sobic008G003900 Sobic004G238900 Sobic004G238900 Sobic002G116800--Sobic004G238900 Sobic007G161800 Sobic007G161800 Sobic002G116800--Sobic007G161800 Sobic001G261200 Sobic001G261200 Sobic002G116800--Sobic001G261200 Sobic010G168301 Sobic010G168301 Sobic002G116800--Sobic010G168301 Sobic009G094900 Sobic009G094900 Sobic002G116800--Sobic009G094900 Sobic001G270400 Sobic001G270400 Sobic004G337200--Sobic001G270400 Sobic004G337200--Sobic003G116900 Sobic004G337200--Sobic001G121200 Sobic001G296900 Sobic001G296900 Sobic004G337200--Sobic001G296900 Sobic004G337200--Sobic004G266400 Sobic002G364800 Sobic002G364800 Sobic004G337200--Sobic002G364800 Sobic006G160300 Sobic006G160300 Sobic004G337200--Sobic006G160300 Sobic005G203800 Sobic005G203800 Sobic004G337200--Sobic005G203800 Sobic006G034000 Sobic006G034000 Sobic004G337200--Sobic006G034000
Octagon: transcription factors


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