Gene annotation
Transcriptome id Sobic.002G159700.2,Sobic.002G159700.1
Synonym
Functional annotation -
UniProt A0A1B6QBN7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G159700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G146800 expressed protein -
2 Sobic.004G266400 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
3 Sobic.010G224000 molybdenum cofactor sulfurase, putative, expressed K15631: molybdenum cofactor sulfurtransferase
4 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.006G043600 cysteine proteinase 1 precursor, putative, expressed K01373: cathepsin F
6 Sobic.002G111000 peptidase, putative, expressed -
7 Sobic.006G160300 DNA binding protein, putative, expressed -
8 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
9 Sobic.004G068400 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
10 Sobic.002G169900 hydrolase, NUDIX family, domain containing protein, expressed -
11 Sobic.008G070500 GTP binding protein, putative, expressed -
12 Sobic.003G110000 TBC domain containing protein, expressed -
13 Sobic.004G200200 joka2, putative, expressed K17987: next to BRCA1 gene 1 protein
14 Sobic.009G113000 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
15 Sobic.001G248300 OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed K01303: acylaminoacyl-peptidase
16 Sobic.004G131040 - K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
17 Sobic.003G086900 C2 domain containing protein, putative, expressed -
18 Sobic.004G355000 SAC9, putative, expressed -
19 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2
20 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4


Gene co-expression network
sample Sobic002G159700 Sobic002G159700 Sobic001G146800 Sobic001G146800 Sobic002G159700--Sobic001G146800 Sobic004G266400 Sobic004G266400 Sobic002G159700--Sobic004G266400 Sobic010G224000 Sobic010G224000 Sobic002G159700--Sobic010G224000 Sobic001G121200 Sobic001G121200 Sobic002G159700--Sobic001G121200 Sobic006G043600 Sobic006G043600 Sobic002G159700--Sobic006G043600 Sobic002G111000 Sobic002G111000 Sobic002G159700--Sobic002G111000 Sobic006G160300 Sobic006G160300 Sobic002G159700--Sobic006G160300 Sobic007G193700 Sobic007G193700 Sobic002G159700--Sobic007G193700 Sobic004G068400 Sobic004G068400 Sobic002G159700--Sobic004G068400 Sobic001G058700 Sobic001G058700 Sobic001G146800--Sobic001G058700 Sobic004G200200 Sobic004G200200 Sobic001G146800--Sobic004G200200 Sobic001G498600 Sobic001G498600 Sobic001G146800--Sobic001G498600 Sobic004G347400 Sobic004G347400 Sobic001G146800--Sobic004G347400 Sobic010G112000 Sobic010G112000 Sobic001G146800--Sobic010G112000 Sobic001G178700 Sobic001G178700 Sobic001G146800--Sobic001G178700 Sobic004G113400 Sobic004G113400 Sobic001G146800--Sobic004G113400 Sobic006G131500 Sobic006G131500 Sobic001G146800--Sobic006G131500 Sobic007G172400 Sobic007G172400 Sobic001G146800--Sobic007G172400 Sobic004G266400--Sobic006G043600 Sobic006G204900 Sobic006G204900 Sobic004G266400--Sobic006G204900 Sobic004G266400--Sobic002G159700 Sobic001G016700 Sobic001G016700 Sobic004G266400--Sobic001G016700 Sobic004G266400--Sobic010G224000 Sobic003G322700 Sobic003G322700 Sobic004G266400--Sobic003G322700 Sobic001G462500 Sobic001G462500 Sobic004G266400--Sobic001G462500 Sobic004G266400--Sobic001G121200 Sobic001G207400 Sobic001G207400 Sobic004G266400--Sobic001G207400 Sobic010G224000--Sobic010G112000 Sobic009G113000 Sobic009G113000 Sobic010G224000--Sobic009G113000 Sobic001G248300 Sobic001G248300 Sobic010G224000--Sobic001G248300 Sobic009G053900 Sobic009G053900 Sobic010G224000--Sobic009G053900 Sobic010G001500 Sobic010G001500 Sobic010G224000--Sobic010G001500 Sobic007G075400 Sobic007G075400 Sobic010G224000--Sobic007G075400 Sobic010G153700 Sobic010G153700 Sobic010G224000--Sobic010G153700 Sobic010G224000--Sobic001G121200 Sobic010G224000--Sobic004G347400 Sobic001G390800 Sobic001G390800 Sobic001G121200--Sobic001G390800 Sobic010G205800 Sobic010G205800 Sobic001G121200--Sobic010G205800 Sobic001G268200 Sobic001G268200 Sobic001G121200--Sobic001G268200 Sobic001G121200--Sobic009G113000 Sobic001G121200--Sobic002G111000 Sobic010G147100 Sobic010G147100 Sobic001G121200--Sobic010G147100 Sobic001G207000 Sobic001G207000 Sobic001G121200--Sobic001G207000 Sobic001G121200--Sobic001G146800 Sobic009G056200 Sobic009G056200 Sobic001G121200--Sobic009G056200 Sobic006G043600--Sobic004G266400 Sobic010G138000 Sobic010G138000 Sobic006G043600--Sobic010G138000 Sobic004G065000 Sobic004G065000 Sobic006G043600--Sobic004G065000 Sobic009G133500 Sobic009G133500 Sobic006G043600--Sobic009G133500 Sobic006G043600--Sobic010G224000 Sobic006G087700 Sobic006G087700 Sobic006G043600--Sobic006G087700 Sobic006G043600--Sobic001G121200 Sobic006G043600--Sobic010G001500 Sobic006G043600--Sobic006G204900 Sobic002G111000--Sobic001G207400 Sobic002G111000--Sobic001G390800 Sobic002G111000--Sobic001G016700 Sobic002G111000--Sobic001G121200 Sobic003G365300 Sobic003G365300 Sobic002G111000--Sobic003G365300 Sobic002G430000 Sobic002G430000 Sobic002G111000--Sobic002G430000 Sobic010G139600 Sobic010G139600 Sobic002G111000--Sobic010G139600 Sobic002G111000--Sobic010G147100 Sobic001G137100 Sobic001G137100 Sobic002G111000--Sobic001G137100 Sobic003G195000 Sobic003G195000 Sobic006G160300--Sobic003G195000 Sobic006G199200 Sobic006G199200 Sobic006G160300--Sobic006G199200 Sobic006G160300--Sobic001G121200 Sobic006G160300--Sobic001G268200 Sobic006G160300--Sobic009G056200 Sobic003G086900 Sobic003G086900 Sobic006G160300--Sobic003G086900 Sobic006G160300--Sobic007G193700 Sobic006G160300--Sobic010G147100 Sobic003G220800 Sobic003G220800 Sobic006G160300--Sobic003G220800 Sobic004G263600 Sobic004G263600 Sobic007G193700--Sobic004G263600 Sobic007G193700--Sobic003G086900 Sobic007G193700--Sobic004G200200 Sobic004G174200 Sobic004G174200 Sobic007G193700--Sobic004G174200 Sobic002G134200 Sobic002G134200 Sobic007G193700--Sobic002G134200 Sobic010G239600 Sobic010G239600 Sobic007G193700--Sobic010G239600 Sobic003G139900 Sobic003G139900 Sobic007G193700--Sobic003G139900 Sobic003G247500 Sobic003G247500 Sobic007G193700--Sobic003G247500 Sobic003G396200 Sobic003G396200 Sobic007G193700--Sobic003G396200 Sobic004G068400--Sobic006G204900 Sobic004G068400--Sobic009G133500 Sobic008G098900 Sobic008G098900 Sobic004G068400--Sobic008G098900 Sobic010G210500 Sobic010G210500 Sobic004G068400--Sobic010G210500 Sobic001G370900 Sobic001G370900 Sobic004G068400--Sobic001G370900 Sobic003G110000 Sobic003G110000 Sobic004G068400--Sobic003G110000 Sobic004G068400--Sobic004G266400 Sobic007G172200 Sobic007G172200 Sobic004G068400--Sobic007G172200 Sobic004G068400--Sobic001G207400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.