Gene annotation
Transcriptome id Sobic.003G421700.1
Synonym Sb03g045460, BG3
Functional annotation "beta-1,3-glucanase " (PubMedID : 25311645)
glycosyl hydrolases family 17, putative, expressed
UniProt C5XHR8
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF126
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G57240 : beta-1,3-glucanase 3
RAP-DB (Rice) LOC_Os01g71340.1 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a026066
Brachypodium KQK11504
Barley HORVU7Hr1G120450.5 , HORVU7Hr1G120450.3 , HORVU7Hr1G120450.2 , HORVU7Hr1G120450.1 , HORVU7Hr1G120450.4 , HORVU7Hr1G051310.3 , HORVU7Hr1G051310.2 , HORVU7Hr1G051310.1 , HORVU3Hr1G105290.1 , HORVU3Hr1G105420.3 , HORVU3Hr1G105420.2 , HORVU3Hr1G105420.1
Wheat TraesCS3B02G525000 , TraesCS3A02G480400 , TraesCS7D02G552500 , TraesCS3B02G526000 , TraesCS3D02G475200 , TraesCS7B02G482600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G217700 carboxyl-terminal peptidase, putative, expressed -
2 Sobic.006G174600 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
3 Sobic.009G037200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
4 Sobic.002G286400 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
5 Sobic.010G193000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G413800 cytochrome P450, putative, expressed -
7 Sobic.008G067500 protein kinase, putative, expressed -
8 Sobic.009G255100 hypersensitive-induced response protein, putative, expressed -
9 Sobic.006G113400 heavy metal associated domain containing protein, expressed -
10 Sobic.002G327800 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.002G257100 regulatory protein, putative, expressed -
12 Sobic.010G245100 lectin-like receptor kinase 1, putative, expressed -
13 Sobic.004G258400 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
14 Sobic.009G189000 expressed protein -
15 Sobic.009G148900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.003G010300 cytochrome P450, putative, expressed -
17 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
18 Sobic.005G055900 expressed protein -
19 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
20 Sobic.005G084300 glycosyl hydrolase, putative, expressed -


Gene co-expression network
sample Sobic003G421700 Sobic003G421700 Sobic005G217700 Sobic005G217700 Sobic003G421700--Sobic005G217700 Sobic006G174600 Sobic006G174600 Sobic003G421700--Sobic006G174600 Sobic009G037200 Sobic009G037200 Sobic003G421700--Sobic009G037200 Sobic002G286400 Sobic002G286400 Sobic003G421700--Sobic002G286400 Sobic010G193000 Sobic010G193000 Sobic003G421700--Sobic010G193000 Sobic003G413800 Sobic003G413800 Sobic003G421700--Sobic003G413800 Sobic008G067500 Sobic008G067500 Sobic003G421700--Sobic008G067500 Sobic009G255100 Sobic009G255100 Sobic003G421700--Sobic009G255100 Sobic006G113400 Sobic006G113400 Sobic003G421700--Sobic006G113400 Sobic002G337001 Sobic002G337001 Sobic005G217700--Sobic002G337001 Sobic001G450500 Sobic001G450500 Sobic005G217700--Sobic001G450500 Sobic005G217700--Sobic009G037200 Sobic002G257100 Sobic002G257100 Sobic005G217700--Sobic002G257100 Sobic005G217700--Sobic003G421700 Sobic003G088800 Sobic003G088800 Sobic005G217700--Sobic003G088800 Sobic005G063900 Sobic005G063900 Sobic005G217700--Sobic005G063900 Sobic005G055900 Sobic005G055900 Sobic005G217700--Sobic005G055900 Sobic005G217700--Sobic006G113400 Sobic006G246200 Sobic006G246200 Sobic006G174600--Sobic006G246200 Sobic001G136300 Sobic001G136300 Sobic006G174600--Sobic001G136300 Sobic001G288100 Sobic001G288100 Sobic006G174600--Sobic001G288100 Sobic001G319100 Sobic001G319100 Sobic006G174600--Sobic001G319100 Sobic006G174600--Sobic006G113400 Sobic005G171100 Sobic005G171100 Sobic006G174600--Sobic005G171100 Sobic004G258400 Sobic004G258400 Sobic006G174600--Sobic004G258400 Sobic006G174600--Sobic009G037200 Sobic007G157100 Sobic007G157100 Sobic006G174600--Sobic007G157100 Sobic009G037200--Sobic010G193000 Sobic009G037200--Sobic006G246200 Sobic009G037200--Sobic002G257100 Sobic005G203300 Sobic005G203300 Sobic009G037200--Sobic005G203300 Sobic009G037200--Sobic005G217700 Sobic009G037200--Sobic007G157100 Sobic009G037200--Sobic001G136300 Sobic005G085500 Sobic005G085500 Sobic009G037200--Sobic005G085500 Sobic007G089300 Sobic007G089300 Sobic009G037200--Sobic007G089300 Sobic005G175500 Sobic005G175500 Sobic002G286400--Sobic005G175500 Sobic003G108600 Sobic003G108600 Sobic002G286400--Sobic003G108600 Sobic001G068301 Sobic001G068301 Sobic002G286400--Sobic001G068301 Sobic001G512500 Sobic001G512500 Sobic002G286400--Sobic001G512500 Sobic002G403600 Sobic002G403600 Sobic002G286400--Sobic002G403600 Sobic001G158900 Sobic001G158900 Sobic002G286400--Sobic001G158900 Sobic001G065600 Sobic001G065600 Sobic002G286400--Sobic001G065600 Sobic006G055000 Sobic006G055000 Sobic002G286400--Sobic006G055000 Sobic008G001000 Sobic008G001000 Sobic002G286400--Sobic008G001000 Sobic010G193000--Sobic005G203300 Sobic008G065200 Sobic008G065200 Sobic010G193000--Sobic008G065200 Sobic010G193000--Sobic009G037200 Sobic010G193000--Sobic002G257100 Sobic004G224500 Sobic004G224500 Sobic010G193000--Sobic004G224500 Sobic004G099700 Sobic004G099700 Sobic010G193000--Sobic004G099700 Sobic001G404500 Sobic001G404500 Sobic010G193000--Sobic001G404500 Sobic001G314900 Sobic001G314900 Sobic010G193000--Sobic001G314900 Sobic002G046900 Sobic002G046900 Sobic010G193000--Sobic002G046900 Sobic002G366100 Sobic002G366100 Sobic003G413800--Sobic002G366100 Sobic001G005500 Sobic001G005500 Sobic003G413800--Sobic001G005500 Sobic001G048000 Sobic001G048000 Sobic003G413800--Sobic001G048000 Sobic001G525900 Sobic001G525900 Sobic003G413800--Sobic001G525900 Sobic006G269400 Sobic006G269400 Sobic003G413800--Sobic006G269400 Sobic007G191900 Sobic007G191900 Sobic003G413800--Sobic007G191900 Sobic003G413800--Sobic004G224500 Sobic002G195700 Sobic002G195700 Sobic003G413800--Sobic002G195700 Sobic001G275200 Sobic001G275200 Sobic003G413800--Sobic001G275200 Sobic008G067500--Sobic007G157100 Sobic008G067500--Sobic002G366100 Sobic003G366100 Sobic003G366100 Sobic008G067500--Sobic003G366100 Sobic008G067500--Sobic009G255100 Sobic006G060800 Sobic006G060800 Sobic008G067500--Sobic006G060800 Sobic002G041800 Sobic002G041800 Sobic008G067500--Sobic002G041800 Sobic008G067500--Sobic004G099700 Sobic008G067500--Sobic001G136300 Sobic002G173900 Sobic002G173900 Sobic008G067500--Sobic002G173900 Sobic001G145050 Sobic001G145050 Sobic009G255100--Sobic001G145050 Sobic009G255100--Sobic002G366100 Sobic009G255100--Sobic002G041800 Sobic009G255100--Sobic006G060800 Sobic001G340700 Sobic001G340700 Sobic009G255100--Sobic001G340700 Sobic009G255100--Sobic001G005500 Sobic002G271600 Sobic002G271600 Sobic009G255100--Sobic002G271600 Sobic009G255100--Sobic002G195700 Sobic002G265400 Sobic002G265400 Sobic009G255100--Sobic002G265400 Sobic004G181200 Sobic004G181200 Sobic006G113400--Sobic004G181200 Sobic001G259500 Sobic001G259500 Sobic006G113400--Sobic001G259500 Sobic008G183300 Sobic008G183300 Sobic006G113400--Sobic008G183300 Sobic006G113400--Sobic006G246200 Sobic002G169200 Sobic002G169200 Sobic006G113400--Sobic002G169200
Octagon: transcription factors


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