Gene annotation
Transcriptome id Sobic.002G286400.1
Synonym Sb02g031870
Functional annotation uncharacterized protein PA4923, putative, expressed
UniProt C5X723
Pfam PF03641
Panther DB PTHR31223 PTHR31223:SF14
NCBI CDD -
KEGG Orthology K06966; pyrimidine/purine-5'-nucleotide nucleosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37210 : lysine decarboxylase family protein
RAP-DB (Rice) LOC_Os09g37540.1 : uncharacterized protein PA4923, putative, expressed
MaizeGDB (Corn) Zm00025a047980
Brachypodium PNT65084
Barley HORVU3Hr1G050770.18 , HORVU3Hr1G050770.19 , HORVU3Hr1G050770.14 , HORVU3Hr1G050770.16 , HORVU3Hr1G050770.10 , HORVU3Hr1G050770.12 , HORVU3Hr1G050770.13 , HORVU5Hr1G086520.6 , HORVU5Hr1G086520.7 , HORVU5Hr1G086520.4 , HORVU5Hr1G086520.5 , HORVU5Hr1G086520.8 , HORVU5Hr1G086520.9 , HORVU3Hr1G050770.20 , HORVU5Hr1G086520.10 , HORVU5Hr1G086520.11 , HORVU5Hr1G086520.13 , HORVU1Hr1G094290.10 , HORVU1Hr1G094290.1 , HORVU1Hr1G094290.7 , HORVU1Hr1G094290.6 , HORVU1Hr1G094290.5 , HORVU1Hr1G094290.4 , HORVU1Hr1G094290.9 , HORVU3Hr1G050770.7 , HORVU3Hr1G050770.3 , HORVU3Hr1G050770.1 , HORVU3Hr1G050770.8 , HORVU3Hr1G050770.9 , HORVU5Hr1G124750.2 , HORVU5Hr1G124750.1
Wheat TraesCS5A02G347400 , TraesCS5A02G347500 , TraesCS3D02G213900 , TraesCS3B02G241600 , TraesCS5B02G348600 , TraesCS5B02G348300 , TraesCS5B02G348400 , TraesCS3A02G211100 , TraesCS5D02G353600
Populus -


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cDNA sequences
Sobic.002G286400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
2 Sobic.003G108600 heat shock protein DnaJ, putative, expressed -
3 Sobic.001G068301 - K16189: phytochrome-interacting factor 4
4 Sobic.001G512500 expressed protein -
5 Sobic.002G403600 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@rhythmically expressed gene 2 protein, putative, expressed -
6 Sobic.001G158900 helix-loop-helix DNA-binding domain containing protein, expressed K16189: phytochrome-interacting factor 4
7 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
8 Sobic.006G055000 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.008G001000 AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
10 Sobic.009G189000 expressed protein -
11 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
12 Sobic.001G317400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.010G225600 - -
14 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
15 Sobic.003G003600 similar to Nodule inception protein-like(PubMedID : 29862293)@NIN, putative, expressed -
16 Sobic.008G094000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
17 Sobic.003G014300 expressed protein -
18 Sobic.003G443500 cyclase/dehydrase family protein, expressed -
19 Sobic.004G235600 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
20 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase


Gene co-expression network
sample Sobic002G286400 Sobic002G286400 Sobic005G175500 Sobic005G175500 Sobic002G286400--Sobic005G175500 Sobic003G108600 Sobic003G108600 Sobic002G286400--Sobic003G108600 Sobic001G068301 Sobic001G068301 Sobic002G286400--Sobic001G068301 Sobic001G512500 Sobic001G512500 Sobic002G286400--Sobic001G512500 Sobic002G403600 Sobic002G403600 Sobic002G286400--Sobic002G403600 Sobic001G158900 Sobic001G158900 Sobic002G286400--Sobic001G158900 Sobic001G065600 Sobic001G065600 Sobic002G286400--Sobic001G065600 Sobic006G055000 Sobic006G055000 Sobic002G286400--Sobic006G055000 Sobic008G001000 Sobic008G001000 Sobic002G286400--Sobic008G001000 Sobic003G014300 Sobic003G014300 Sobic005G175500--Sobic003G014300 Sobic006G258700 Sobic006G258700 Sobic005G175500--Sobic006G258700 Sobic005G175600 Sobic005G175600 Sobic005G175500--Sobic005G175600 Sobic004G300000 Sobic004G300000 Sobic005G175500--Sobic004G300000 Sobic006G060601 Sobic006G060601 Sobic005G175500--Sobic006G060601 Sobic001G224900 Sobic001G224900 Sobic005G175500--Sobic001G224900 Sobic001G404500 Sobic001G404500 Sobic005G175500--Sobic001G404500 Sobic009G019100 Sobic009G019100 Sobic005G175500--Sobic009G019100 Sobic010G207500 Sobic010G207500 Sobic005G175500--Sobic010G207500 Sobic010G214000 Sobic010G214000 Sobic003G108600--Sobic010G214000 Sobic009G189000 Sobic009G189000 Sobic003G108600--Sobic009G189000 Sobic003G068800 Sobic003G068800 Sobic003G108600--Sobic003G068800 Sobic001G102300 Sobic001G102300 Sobic003G108600--Sobic001G102300 Sobic010G225600 Sobic010G225600 Sobic003G108600--Sobic010G225600 Sobic003G108600--Sobic006G258700 Sobic006G135100 Sobic006G135100 Sobic003G108600--Sobic006G135100 Sobic004G113800 Sobic004G113800 Sobic003G108600--Sobic004G113800 Sobic001G418700 Sobic001G418700 Sobic003G108600--Sobic001G418700 Sobic004G122200 Sobic004G122200 Sobic001G068301--Sobic004G122200 Sobic001G068301--Sobic010G225600 Sobic005G097800 Sobic005G097800 Sobic001G068301--Sobic005G097800 Sobic003G292600 Sobic003G292600 Sobic001G068301--Sobic003G292600 Sobic001G068301--Sobic001G224900 Sobic001G048000 Sobic001G048000 Sobic001G068301--Sobic001G048000 Sobic001G068301--Sobic006G135100 Sobic001G068301--Sobic002G286400 Sobic005G055900 Sobic005G055900 Sobic001G068301--Sobic005G055900 Sobic004G054400 Sobic004G054400 Sobic001G512500--Sobic004G054400 Sobic001G032700 Sobic001G032700 Sobic001G512500--Sobic001G032700 Sobic001G124800 Sobic001G124800 Sobic001G512500--Sobic001G124800 Sobic001G512500--Sobic003G014300 Sobic004G298900 Sobic004G298900 Sobic001G512500--Sobic004G298900 Sobic003G343500 Sobic003G343500 Sobic001G512500--Sobic003G343500 Sobic010G058200 Sobic010G058200 Sobic001G512500--Sobic010G058200 Sobic004G026500 Sobic004G026500 Sobic001G512500--Sobic004G026500 Sobic003G037300 Sobic003G037300 Sobic001G512500--Sobic003G037300 Sobic001G531500 Sobic001G531500 Sobic002G403600--Sobic001G531500 Sobic004G027600 Sobic004G027600 Sobic002G403600--Sobic004G027600 Sobic006G064100 Sobic006G064100 Sobic002G403600--Sobic006G064100 Sobic001G073900 Sobic001G073900 Sobic002G403600--Sobic001G073900 Sobic004G356400 Sobic004G356400 Sobic002G403600--Sobic004G356400 Sobic003G036200 Sobic003G036200 Sobic002G403600--Sobic003G036200 Sobic006G120500 Sobic006G120500 Sobic002G403600--Sobic006G120500 Sobic005G001700 Sobic005G001700 Sobic002G403600--Sobic005G001700 Sobic010G251700 Sobic010G251700 Sobic002G403600--Sobic010G251700 Sobic001G158900--Sobic001G065600 Sobic002G036000 Sobic002G036000 Sobic001G158900--Sobic002G036000 Sobic005G188600 Sobic005G188600 Sobic001G158900--Sobic005G188600 Sobic001G003200 Sobic001G003200 Sobic001G158900--Sobic001G003200 Sobic006G188000 Sobic006G188000 Sobic001G158900--Sobic006G188000 Sobic006G010900 Sobic006G010900 Sobic001G158900--Sobic006G010900 Sobic008G117000 Sobic008G117000 Sobic001G158900--Sobic008G117000 Sobic005G101300 Sobic005G101300 Sobic001G158900--Sobic005G101300 Sobic001G158900--Sobic002G403600 Sobic001G065600--Sobic001G158900 Sobic001G065600--Sobic001G073900 Sobic001G065600--Sobic005G188600 Sobic001G065600--Sobic006G010900 Sobic008G094000 Sobic008G094000 Sobic001G065600--Sobic008G094000 Sobic001G484400 Sobic001G484400 Sobic001G065600--Sobic001G484400 Sobic001G065600--Sobic002G036000 Sobic001G065600--Sobic001G003200 Sobic003G003600 Sobic003G003600 Sobic001G065600--Sobic003G003600 Sobic005G187900 Sobic005G187900 Sobic006G055000--Sobic005G187900 Sobic009G140000 Sobic009G140000 Sobic006G055000--Sobic009G140000 Sobic002G232200 Sobic002G232200 Sobic006G055000--Sobic002G232200 Sobic008G157600 Sobic008G157600 Sobic006G055000--Sobic008G157600 Sobic003G255900 Sobic003G255900 Sobic006G055000--Sobic003G255900 Sobic006G260800 Sobic006G260800 Sobic006G055000--Sobic006G260800 Sobic006G055000--Sobic004G298900 Sobic004G268500 Sobic004G268500 Sobic006G055000--Sobic004G268500 Sobic009G062400 Sobic009G062400 Sobic006G055000--Sobic009G062400 Sobic001G491200 Sobic001G491200 Sobic008G001000--Sobic001G491200 Sobic004G001300 Sobic004G001300 Sobic008G001000--Sobic004G001300 Sobic001G159400 Sobic001G159400 Sobic008G001000--Sobic001G159400 Sobic008G001000--Sobic003G003600 Sobic003G161000 Sobic003G161000 Sobic008G001000--Sobic003G161000 Sobic001G090500 Sobic001G090500 Sobic008G001000--Sobic001G090500 Sobic003G015600 Sobic003G015600 Sobic008G001000--Sobic003G015600 Sobic003G442700 Sobic003G442700 Sobic008G001000--Sobic003G442700 Sobic001G031300 Sobic001G031300 Sobic008G001000--Sobic001G031300
Octagon: transcription factors


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