Gene annotation
Transcriptome id Sobic.008G001000.1
Synonym JK224, RPT1, Sb08g000260, PHOT1, NPH1
Functional annotation AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt C5YPQ1
Pfam PF07714 PF13426
Panther DB PTHR24351 PTHR24351:SF29
NCBI CDD KOG0610; Putative serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G45780 : phototropin 1
RAP-DB (Rice) LOC_Os12g01140.1 : AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a028908
Brachypodium KQJ92698 , KQJ92699 , KQJ92695 , KQJ92696 , KQJ92697 , PNT65634 , PNT65635
Barley HORVU5Hr1G049160.19 , HORVU5Hr1G049160.18 , HORVU5Hr1G049160.13 , HORVU5Hr1G049160.12 , HORVU5Hr1G049160.11 , HORVU5Hr1G049160.10 , HORVU5Hr1G049160.17 , HORVU5Hr1G049160.16 , HORVU5Hr1G049160.15 , HORVU5Hr1G049160.14 , HORVU5Hr1G049160.31 , HORVU5Hr1G049160.30 , HORVU5Hr1G049160.33 , HORVU5Hr1G049160.32 , HORVU5Hr1G049160.9 , HORVU5Hr1G049160.8 , HORVU5Hr1G049160.3 , HORVU5Hr1G049160.2 , HORVU5Hr1G049160.7 , HORVU5Hr1G049160.6 , HORVU5Hr1G049160.5 , HORVU5Hr1G049160.4 , HORVU5Hr1G049160.22 , HORVU5Hr1G049160.23 , HORVU5Hr1G049160.20 , HORVU5Hr1G049160.21 , HORVU5Hr1G049160.26 , HORVU5Hr1G049160.27 , HORVU5Hr1G049160.24 , HORVU5Hr1G049160.25 , HORVU5Hr1G049160.28 , HORVU5Hr1G049160.29
Wheat TraesCS5D02G162400 , TraesCS5D02G162400 , TraesCS5D02G162400 , TraesCS5B02G155200 , TraesCS5B02G155200 , TraesCS5B02G155200 , TraesCS5B02G155200 , TraesCS5A02G157000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G491200 ABC transporter family protein, putative, expressed -
2 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
3 Sobic.001G159400 protein kinase domain containing protein, expressed -
4 Sobic.003G003600 similar to Nodule inception protein-like(PubMedID : 29862293)@NIN, putative, expressed -
5 Sobic.003G161000 powdery mildew resistance protein PM3F, putative, expressed -
6 Sobic.001G090500 YT521-B-like family domain containing protein, expressed -
7 Sobic.003G015600 plant-specific domain TIGR01589 family protein, putative, expressed -
8 Sobic.003G442700 - -
9 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
10 Sobic.001G433000 FAR1 family protein, expressed -
11 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
12 Sobic.009G127400 PAC, putative, expressed -
13 Sobic.001G261408 - -
14 Sobic.003G381200 KH domain containing protein, putative, expressed K14945: protein quaking
15 Sobic.002G354501 - -
16 Sobic.003G138500 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
17 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G396200 expressed protein K13146: integrator complex subunit 9
19 Sobic.003G149300 pentatricopeptide, putative, expressed -
20 Sobic.002G286400 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase


Gene co-expression network
sample Sobic008G001000 Sobic008G001000 Sobic001G491200 Sobic001G491200 Sobic008G001000--Sobic001G491200 Sobic004G001300 Sobic004G001300 Sobic008G001000--Sobic004G001300 Sobic001G159400 Sobic001G159400 Sobic008G001000--Sobic001G159400 Sobic003G003600 Sobic003G003600 Sobic008G001000--Sobic003G003600 Sobic003G161000 Sobic003G161000 Sobic008G001000--Sobic003G161000 Sobic001G090500 Sobic001G090500 Sobic008G001000--Sobic001G090500 Sobic003G015600 Sobic003G015600 Sobic008G001000--Sobic003G015600 Sobic003G442700 Sobic003G442700 Sobic008G001000--Sobic003G442700 Sobic001G031300 Sobic001G031300 Sobic008G001000--Sobic001G031300 Sobic001G491200--Sobic008G001000 Sobic008G118000 Sobic008G118000 Sobic001G491200--Sobic008G118000 Sobic009G127400 Sobic009G127400 Sobic001G491200--Sobic009G127400 Sobic007G076700 Sobic007G076700 Sobic001G491200--Sobic007G076700 Sobic001G491200--Sobic004G001300 Sobic001G491200--Sobic003G161000 Sobic001G261408 Sobic001G261408 Sobic001G491200--Sobic001G261408 Sobic001G491200--Sobic001G031300 Sobic002G114700 Sobic002G114700 Sobic001G491200--Sobic002G114700 Sobic001G118100 Sobic001G118100 Sobic004G001300--Sobic001G118100 Sobic007G204900 Sobic007G204900 Sobic004G001300--Sobic007G204900 Sobic004G001300--Sobic008G001000 Sobic004G001300--Sobic003G442700 Sobic004G001300--Sobic003G161000 Sobic001G098301 Sobic001G098301 Sobic004G001300--Sobic001G098301 Sobic004G001300--Sobic003G003600 Sobic003G137100 Sobic003G137100 Sobic004G001300--Sobic003G137100 Sobic001G060401 Sobic001G060401 Sobic004G001300--Sobic001G060401 Sobic003G381200 Sobic003G381200 Sobic001G159400--Sobic003G381200 Sobic003G138500 Sobic003G138500 Sobic001G159400--Sobic003G138500 Sobic001G159400--Sobic001G090500 Sobic010G256700 Sobic010G256700 Sobic001G159400--Sobic010G256700 Sobic007G193700 Sobic007G193700 Sobic001G159400--Sobic007G193700 Sobic002G276100 Sobic002G276100 Sobic001G159400--Sobic002G276100 Sobic003G396200 Sobic003G396200 Sobic001G159400--Sobic003G396200 Sobic004G181700 Sobic004G181700 Sobic001G159400--Sobic004G181700 Sobic004G317100 Sobic004G317100 Sobic001G159400--Sobic004G317100 Sobic001G065600 Sobic001G065600 Sobic003G003600--Sobic001G065600 Sobic001G073900 Sobic001G073900 Sobic003G003600--Sobic001G073900 Sobic003G003600--Sobic003G442700 Sobic003G003600--Sobic004G001300 Sobic001G418700 Sobic001G418700 Sobic003G003600--Sobic001G418700 Sobic003G003600--Sobic003G161000 Sobic003G003600--Sobic008G001000 Sobic001G158900 Sobic001G158900 Sobic003G003600--Sobic001G158900 Sobic002G385700 Sobic002G385700 Sobic003G003600--Sobic002G385700 Sobic003G161000--Sobic004G001300 Sobic001G261573 Sobic001G261573 Sobic003G161000--Sobic001G261573 Sobic010G176550 Sobic010G176550 Sobic003G161000--Sobic010G176550 Sobic002G031400 Sobic002G031400 Sobic003G161000--Sobic002G031400 Sobic003G161000--Sobic003G442700 Sobic003G161000--Sobic003G003600 Sobic003G149300 Sobic003G149300 Sobic003G161000--Sobic003G149300 Sobic005G039500 Sobic005G039500 Sobic003G161000--Sobic005G039500 Sobic002G402600 Sobic002G402600 Sobic003G161000--Sobic002G402600 Sobic001G090500--Sobic003G381200 Sobic001G090500--Sobic001G159400 Sobic003G106200 Sobic003G106200 Sobic001G090500--Sobic003G106200 Sobic001G090500--Sobic007G193700 Sobic007G065100 Sobic007G065100 Sobic001G090500--Sobic007G065100 Sobic004G035000 Sobic004G035000 Sobic001G090500--Sobic004G035000 Sobic001G090500--Sobic004G317100 Sobic002G169633 Sobic002G169633 Sobic001G090500--Sobic002G169633 Sobic001G090500--Sobic002G031400 Sobic008G094000 Sobic008G094000 Sobic003G015600--Sobic008G094000 Sobic003G015600--Sobic003G442700 Sobic001G465700 Sobic001G465700 Sobic003G015600--Sobic001G465700 Sobic003G015600--Sobic008G001000 Sobic001G003200 Sobic001G003200 Sobic003G015600--Sobic001G003200 Sobic001G072700 Sobic001G072700 Sobic003G015600--Sobic001G072700 Sobic003G037300 Sobic003G037300 Sobic003G015600--Sobic003G037300 Sobic003G015600--Sobic003G138500 Sobic003G015600--Sobic003G381200 Sobic003G442700--Sobic001G465700 Sobic004G235600 Sobic004G235600 Sobic003G442700--Sobic004G235600 Sobic008G001900 Sobic008G001900 Sobic003G442700--Sobic008G001900 Sobic003G332700 Sobic003G332700 Sobic003G442700--Sobic003G332700 Sobic009G121000 Sobic009G121000 Sobic003G442700--Sobic009G121000 Sobic002G042500 Sobic002G042500 Sobic003G442700--Sobic002G042500 Sobic003G442700--Sobic001G060401 Sobic003G442700--Sobic004G001300 Sobic003G442700--Sobic001G073900 Sobic010G258300 Sobic010G258300 Sobic001G031300--Sobic010G258300 Sobic001G031300--Sobic007G076700 Sobic007G205600 Sobic007G205600 Sobic001G031300--Sobic007G205600 Sobic001G031300--Sobic004G035000 Sobic009G154600 Sobic009G154600 Sobic001G031300--Sobic009G154600 Sobic003G222300 Sobic003G222300 Sobic001G031300--Sobic003G222300 Sobic001G377000 Sobic001G377000 Sobic001G031300--Sobic001G377000 Sobic001G191200 Sobic001G191200 Sobic001G031300--Sobic001G191200 Sobic007G110200 Sobic007G110200 Sobic001G031300--Sobic007G110200
Octagon: transcription factors


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