Gene annotation
Transcriptome id Sobic.001G491200.1
Synonym MRP3, Sb01g045940, ATMRP3
Functional annotation ABC transporter family protein, putative, expressed
UniProt A0A1B6QQ96
Pfam PF00005 PF00664
Panther DB PTHR24223 PTHR24223:SF181
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016021integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT3G13080 : multidrug resistance-associated protein 3
RAP-DB (Rice) LOC_Os01g07870.1 : ABC transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a035729 , Zm00025a053348
Brachypodium PNT73184 , PNT73183 , PNT65236 , KQK02942
Barley HORVU3Hr1G085890.10 , HORVU3Hr1G085890.13 , HORVU3Hr1G085890.12 , HORVU3Hr1G085890.14 , HORVU3Hr1G085890.17 , HORVU3Hr1G024210.6 , HORVU3Hr1G024210.7 , HORVU3Hr1G024210.4 , HORVU3Hr1G024210.5 , HORVU3Hr1G024210.2 , HORVU3Hr1G024210.3 , HORVU3Hr1G024210.1 , HORVU3Hr1G024210.8 , HORVU3Hr1G024210.9 , HORVU3Hr1G085890.11 , HORVU3Hr1G085890.15 , HORVU3Hr1G085890.8 , HORVU3Hr1G085890.5 , HORVU3Hr1G085890.4 , HORVU3Hr1G085890.7 , HORVU3Hr1G085890.6 , HORVU3Hr1G085890.1 , HORVU3Hr1G085890.3 , HORVU3Hr1G085890.2 , HORVU3Hr1G024210.10
Wheat TraesCS4A02G051100 , TraesCS3A02G129000 , TraesCS3D02G129900 , TraesCS3D02G129900 , TraesCS3D02G356300 , TraesCS3D02G356300 , TraesCS4D02G253300 , TraesCS3A02G362500 , TraesCS4D02G253300 , TraesCS4D02G253300 , TraesCS3B02G395000 , TraesCS3B02G395000 , TraesCS4B02G253200 , TraesCS3B02G148100 , TraesCS3B02G148100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G001000 AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
2 Sobic.008G118000 Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C11 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
3 Sobic.009G127400 PAC, putative, expressed -
4 Sobic.007G076700 coproporphyrinogen III oxidase, chloroplast precursor, putative, expressed K00228: CPOX, coproporphyrinogen III oxidase
5 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
6 Sobic.003G161000 powdery mildew resistance protein PM3F, putative, expressed -
7 Sobic.001G261408 - -
8 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
9 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.009G085400 acyl-activating enzyme 14, putative, expressed -
11 Sobic.003G149300 pentatricopeptide, putative, expressed -
12 Sobic.004G035000 S-adenosyl-L-methionine-dependent methyltransferase mraW, putative, expressed -
13 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
14 Sobic.003G003600 similar to Nodule inception protein-like(PubMedID : 29862293)@NIN, putative, expressed -
15 Sobic.002G354501 - -
16 Sobic.004G241500 expressed protein -
17 Sobic.003G170200 OsClp2 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
18 Sobic.007G069400 pentatricopeptide, putative, expressed -
19 Sobic.001G544600 phosphoribosyl transferase, putative, expressed K00948: PRPS, ribose-phosphate pyrophosphokinase
20 Sobic.006G214400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -


Gene co-expression network
sample Sobic001G491200 Sobic001G491200 Sobic008G001000 Sobic008G001000 Sobic001G491200--Sobic008G001000 Sobic008G118000 Sobic008G118000 Sobic001G491200--Sobic008G118000 Sobic009G127400 Sobic009G127400 Sobic001G491200--Sobic009G127400 Sobic007G076700 Sobic007G076700 Sobic001G491200--Sobic007G076700 Sobic004G001300 Sobic004G001300 Sobic001G491200--Sobic004G001300 Sobic003G161000 Sobic003G161000 Sobic001G491200--Sobic003G161000 Sobic001G261408 Sobic001G261408 Sobic001G491200--Sobic001G261408 Sobic001G031300 Sobic001G031300 Sobic001G491200--Sobic001G031300 Sobic002G114700 Sobic002G114700 Sobic001G491200--Sobic002G114700 Sobic008G001000--Sobic001G491200 Sobic008G001000--Sobic004G001300 Sobic001G159400 Sobic001G159400 Sobic008G001000--Sobic001G159400 Sobic003G003600 Sobic003G003600 Sobic008G001000--Sobic003G003600 Sobic008G001000--Sobic003G161000 Sobic001G090500 Sobic001G090500 Sobic008G001000--Sobic001G090500 Sobic003G015600 Sobic003G015600 Sobic008G001000--Sobic003G015600 Sobic003G442700 Sobic003G442700 Sobic008G001000--Sobic003G442700 Sobic008G001000--Sobic001G031300 Sobic006G214400 Sobic006G214400 Sobic008G118000--Sobic006G214400 Sobic008G101500 Sobic008G101500 Sobic008G118000--Sobic008G101500 Sobic003G178700 Sobic003G178700 Sobic008G118000--Sobic003G178700 Sobic008G118000--Sobic001G491200 Sobic001G217700 Sobic001G217700 Sobic008G118000--Sobic001G217700 Sobic008G118000--Sobic002G114700 Sobic008G118000--Sobic007G076700 Sobic009G085400 Sobic009G085400 Sobic008G118000--Sobic009G085400 Sobic004G315800 Sobic004G315800 Sobic008G118000--Sobic004G315800 Sobic003G040000 Sobic003G040000 Sobic009G127400--Sobic003G040000 Sobic007G069400 Sobic007G069400 Sobic009G127400--Sobic007G069400 Sobic001G037500 Sobic001G037500 Sobic009G127400--Sobic001G037500 Sobic009G127400--Sobic007G076700 Sobic003G149300 Sobic003G149300 Sobic009G127400--Sobic003G149300 Sobic009G127400--Sobic002G114700 Sobic005G197300 Sobic005G197300 Sobic009G127400--Sobic005G197300 Sobic003G327200 Sobic003G327200 Sobic009G127400--Sobic003G327200 Sobic001G261573 Sobic001G261573 Sobic009G127400--Sobic001G261573 Sobic004G035000 Sobic004G035000 Sobic007G076700--Sobic004G035000 Sobic007G076700--Sobic001G031300 Sobic002G209600 Sobic002G209600 Sobic007G076700--Sobic002G209600 Sobic007G076700--Sobic003G040000 Sobic007G076700--Sobic009G127400 Sobic004G142700 Sobic004G142700 Sobic007G076700--Sobic004G142700 Sobic003G112700 Sobic003G112700 Sobic007G076700--Sobic003G112700 Sobic007G076700--Sobic002G114700 Sobic001G354501 Sobic001G354501 Sobic007G076700--Sobic001G354501 Sobic001G118100 Sobic001G118100 Sobic004G001300--Sobic001G118100 Sobic007G204900 Sobic007G204900 Sobic004G001300--Sobic007G204900 Sobic004G001300--Sobic008G001000 Sobic004G001300--Sobic003G442700 Sobic004G001300--Sobic003G161000 Sobic001G098301 Sobic001G098301 Sobic004G001300--Sobic001G098301 Sobic004G001300--Sobic003G003600 Sobic003G137100 Sobic003G137100 Sobic004G001300--Sobic003G137100 Sobic001G060401 Sobic001G060401 Sobic004G001300--Sobic001G060401 Sobic003G161000--Sobic004G001300 Sobic003G161000--Sobic001G261573 Sobic010G176550 Sobic010G176550 Sobic003G161000--Sobic010G176550 Sobic002G031400 Sobic002G031400 Sobic003G161000--Sobic002G031400 Sobic003G161000--Sobic003G442700 Sobic003G161000--Sobic003G003600 Sobic003G161000--Sobic003G149300 Sobic005G039500 Sobic005G039500 Sobic003G161000--Sobic005G039500 Sobic002G402600 Sobic002G402600 Sobic003G161000--Sobic002G402600 Sobic001G073900 Sobic001G073900 Sobic001G261408--Sobic001G073900 Sobic002G049600 Sobic002G049600 Sobic001G261408--Sobic002G049600 Sobic003G332700 Sobic003G332700 Sobic001G261408--Sobic003G332700 Sobic004G235600 Sobic004G235600 Sobic001G261408--Sobic004G235600 Sobic001G261408--Sobic003G003600 Sobic001G261408--Sobic008G001000 Sobic008G117000 Sobic008G117000 Sobic001G261408--Sobic008G117000 Sobic003G342100 Sobic003G342100 Sobic001G261408--Sobic003G342100 Sobic010G205100 Sobic010G205100 Sobic001G261408--Sobic010G205100 Sobic010G258300 Sobic010G258300 Sobic001G031300--Sobic010G258300 Sobic001G031300--Sobic007G076700 Sobic007G205600 Sobic007G205600 Sobic001G031300--Sobic007G205600 Sobic001G031300--Sobic004G035000 Sobic009G154600 Sobic009G154600 Sobic001G031300--Sobic009G154600 Sobic003G222300 Sobic003G222300 Sobic001G031300--Sobic003G222300 Sobic001G377000 Sobic001G377000 Sobic001G031300--Sobic001G377000 Sobic001G191200 Sobic001G191200 Sobic001G031300--Sobic001G191200 Sobic007G110200 Sobic007G110200 Sobic001G031300--Sobic007G110200 Sobic008G078900 Sobic008G078900 Sobic002G114700--Sobic008G078900 Sobic003G114100 Sobic003G114100 Sobic002G114700--Sobic003G114100 Sobic006G273400 Sobic006G273400 Sobic002G114700--Sobic006G273400 Sobic001G076200 Sobic001G076200 Sobic002G114700--Sobic001G076200 Sobic003G110700 Sobic003G110700 Sobic002G114700--Sobic003G110700 Sobic002G114700--Sobic007G069400 Sobic002G114700--Sobic006G214400 Sobic002G114700--Sobic004G035000 Sobic002G114700--Sobic007G205600
Octagon: transcription factors


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