Gene annotation
Transcriptome id Sobic.001G544600.2
Synonym Sb01g050690
Functional annotation phosphoribosyl transferase, putative, expressed
UniProt A0A1Z5SC49
Pfam PF14572 PF13793
Panther DB PTHR10210 PTHR10210:SF58
NCBI CDD KOG1448; Ribose-phosphate pyrophosphokinase
KEGG Orthology K00948; PRPS, ribose-phosphate pyrophosphokinase
Gene Ontology GO:0009165; nucleotide biosynthetic process GO:0004749ribose phosphate diphosphokinase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT2G44530 : Phosphoribosyltransferase family protein
RAP-DB (Rice) LOC_Os03g01018.1 : phosphoribosyl transferase, putative, expressed
MaizeGDB (Corn) Zm00025a000064 , Zm00025a000043 , Zm00025a000033 , Zm00025a058062 , Zm00025a000034
Brachypodium KQK24197
Barley HORVU4Hr1G090310.20 , HORVU4Hr1G090310.21 , HORVU4Hr1G090310.17 , HORVU4Hr1G090310.16 , HORVU4Hr1G090310.15 , HORVU4Hr1G090310.14 , HORVU4Hr1G090310.13 , HORVU4Hr1G090310.12 , HORVU4Hr1G090310.11 , HORVU4Hr1G090310.10 , HORVU4Hr1G090310.19 , HORVU4Hr1G090310.18 , HORVU4Hr1G090310.9 , HORVU4Hr1G090310.8 , HORVU4Hr1G090310.7 , HORVU4Hr1G090310.3 , HORVU4Hr1G090310.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G170200 OsClp2 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
3 Sobic.003G114100 expressed protein -
4 Sobic.001G491200 ABC transporter family protein, putative, expressed -
5 Sobic.001G455500 pentatricopeptide repeat domain containing protein, putative, expressed -
6 Sobic.008G183200 LOL3, putative, expressed -
7 Sobic.008G001000 AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.010G107400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
9 Sobic.007G205600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
10 Sobic.008G118000 Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C11 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
11 Sobic.010G258300 integral membrane protein, putative, expressed -
12 Sobic.008G101500 powdery mildew resistance protein PM3b, putative, expressed -
13 Sobic.009G085500 hydrolase, alpha/beta fold family protein, putative, expressed -
14 Sobic.001G354501 - K07877: Ras-related protein Rab-2A
15 Sobic.003G110700 nuclear transport factor, putative, expressed -
16 Sobic.008G078900 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
17 Sobic.005G111500 FHA domain containing protein, putative, expressed -
18 Sobic.004G011566 - K03781: katE, CAT, catB, catalase
19 Sobic.008G131700 PsbP, putative, expressed -
20 Sobic.003G161000 powdery mildew resistance protein PM3F, putative, expressed -


Gene co-expression network
sample Sobic001G544600 Sobic001G544600 Sobic002G114700 Sobic002G114700 Sobic001G544600--Sobic002G114700 Sobic003G170200 Sobic003G170200 Sobic001G544600--Sobic003G170200 Sobic003G114100 Sobic003G114100 Sobic001G544600--Sobic003G114100 Sobic001G491200 Sobic001G491200 Sobic001G544600--Sobic001G491200 Sobic001G455500 Sobic001G455500 Sobic001G544600--Sobic001G455500 Sobic008G183200 Sobic008G183200 Sobic001G544600--Sobic008G183200 Sobic008G001000 Sobic008G001000 Sobic001G544600--Sobic008G001000 Sobic010G107400 Sobic010G107400 Sobic001G544600--Sobic010G107400 Sobic007G205600 Sobic007G205600 Sobic001G544600--Sobic007G205600 Sobic008G078900 Sobic008G078900 Sobic002G114700--Sobic008G078900 Sobic002G114700--Sobic003G114100 Sobic006G273400 Sobic006G273400 Sobic002G114700--Sobic006G273400 Sobic001G076200 Sobic001G076200 Sobic002G114700--Sobic001G076200 Sobic003G110700 Sobic003G110700 Sobic002G114700--Sobic003G110700 Sobic007G069400 Sobic007G069400 Sobic002G114700--Sobic007G069400 Sobic006G214400 Sobic006G214400 Sobic002G114700--Sobic006G214400 Sobic004G035000 Sobic004G035000 Sobic002G114700--Sobic004G035000 Sobic002G114700--Sobic007G205600 Sobic001G102500 Sobic001G102500 Sobic003G170200--Sobic001G102500 Sobic003G170200--Sobic007G205600 Sobic003G170200--Sobic008G078900 Sobic003G162800 Sobic003G162800 Sobic003G170200--Sobic003G162800 Sobic003G286300 Sobic003G286300 Sobic003G170200--Sobic003G286300 Sobic001G514100 Sobic001G514100 Sobic003G170200--Sobic001G514100 Sobic001G375000 Sobic001G375000 Sobic003G170200--Sobic001G375000 Sobic001G450600 Sobic001G450600 Sobic003G170200--Sobic001G450600 Sobic003G128400 Sobic003G128400 Sobic003G170200--Sobic003G128400 Sobic003G114100--Sobic002G114700 Sobic003G114100--Sobic001G076200 Sobic003G114100--Sobic008G078900 Sobic010G052500 Sobic010G052500 Sobic003G114100--Sobic010G052500 Sobic003G014000 Sobic003G014000 Sobic003G114100--Sobic003G014000 Sobic007G201400 Sobic007G201400 Sobic003G114100--Sobic007G201400 Sobic008G131700 Sobic008G131700 Sobic003G114100--Sobic008G131700 Sobic003G114100--Sobic006G273400 Sobic003G114100--Sobic001G514100 Sobic001G491200--Sobic008G001000 Sobic008G118000 Sobic008G118000 Sobic001G491200--Sobic008G118000 Sobic009G127400 Sobic009G127400 Sobic001G491200--Sobic009G127400 Sobic007G076700 Sobic007G076700 Sobic001G491200--Sobic007G076700 Sobic004G001300 Sobic004G001300 Sobic001G491200--Sobic004G001300 Sobic003G161000 Sobic003G161000 Sobic001G491200--Sobic003G161000 Sobic001G261408 Sobic001G261408 Sobic001G491200--Sobic001G261408 Sobic001G031300 Sobic001G031300 Sobic001G491200--Sobic001G031300 Sobic001G491200--Sobic002G114700 Sobic003G439000 Sobic003G439000 Sobic001G455500--Sobic003G439000 Sobic004G179200 Sobic004G179200 Sobic001G455500--Sobic004G179200 Sobic002G297400 Sobic002G297400 Sobic001G455500--Sobic002G297400 Sobic001G186200 Sobic001G186200 Sobic001G455500--Sobic001G186200 Sobic001G006000 Sobic001G006000 Sobic001G455500--Sobic001G006000 Sobic004G357300 Sobic004G357300 Sobic001G455500--Sobic004G357300 Sobic001G469900 Sobic001G469900 Sobic001G455500--Sobic001G469900 Sobic006G210400 Sobic006G210400 Sobic001G455500--Sobic006G210400 Sobic001G001300 Sobic001G001300 Sobic001G455500--Sobic001G001300 Sobic004G122200 Sobic004G122200 Sobic008G183200--Sobic004G122200 Sobic010G241300 Sobic010G241300 Sobic008G183200--Sobic010G241300 Sobic005G127000 Sobic005G127000 Sobic008G183200--Sobic005G127000 Sobic005G111500 Sobic005G111500 Sobic008G183200--Sobic005G111500 Sobic007G059500 Sobic007G059500 Sobic008G183200--Sobic007G059500 Sobic008G183200--Sobic003G110700 Sobic001G377500 Sobic001G377500 Sobic008G183200--Sobic001G377500 Sobic010G164200 Sobic010G164200 Sobic008G183200--Sobic010G164200 Sobic006G102400 Sobic006G102400 Sobic008G183200--Sobic006G102400 Sobic008G001000--Sobic001G491200 Sobic008G001000--Sobic004G001300 Sobic001G159400 Sobic001G159400 Sobic008G001000--Sobic001G159400 Sobic003G003600 Sobic003G003600 Sobic008G001000--Sobic003G003600 Sobic008G001000--Sobic003G161000 Sobic001G090500 Sobic001G090500 Sobic008G001000--Sobic001G090500 Sobic003G015600 Sobic003G015600 Sobic008G001000--Sobic003G015600 Sobic003G442700 Sobic003G442700 Sobic008G001000--Sobic003G442700 Sobic008G001000--Sobic001G031300 Sobic010G107400--Sobic008G183200 Sobic010G107400--Sobic010G164200 Sobic010G107400--Sobic004G122200 Sobic003G068800 Sobic003G068800 Sobic010G107400--Sobic003G068800 Sobic010G107400--Sobic003G110700 Sobic010G107400--Sobic001G377500 Sobic010G107400--Sobic006G102400 Sobic010G225600 Sobic010G225600 Sobic010G107400--Sobic010G225600 Sobic009G085500 Sobic009G085500 Sobic010G107400--Sobic009G085500 Sobic001G388400 Sobic001G388400 Sobic007G205600--Sobic001G388400 Sobic007G205600--Sobic003G170200 Sobic001G537700 Sobic001G537700 Sobic007G205600--Sobic001G537700 Sobic010G258300 Sobic010G258300 Sobic007G205600--Sobic010G258300 Sobic006G220600 Sobic006G220600 Sobic007G205600--Sobic006G220600 Sobic003G222600 Sobic003G222600 Sobic007G205600--Sobic003G222600 Sobic010G211500 Sobic010G211500 Sobic007G205600--Sobic010G211500 Sobic007G205600--Sobic001G450600 Sobic007G205600--Sobic001G031300
Octagon: transcription factors


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