Gene annotation
Transcriptome id Sobic.004G011566.1,Sobic.004G011566.2
Synonym -
Functional annotation -
UniProt A0A1Z5RKL6 , A0A1Z5RKF8 , H2DLY7
Pfam PF06628 PF00199
Panther DB PTHR11465 PTHR11465:SF17
NCBI CDD -
KEGG Orthology K03781; katE, CAT, catB, catalase
Gene Ontology GO:0004096; catalase activity GO:0006979response to oxidative stress


Orthologs (automatic annotation)
TAIR AT1G20630 : catalase 1
RAP-DB (Rice) LOC_Os02g02400.1 : catalase isozyme A, putative, expressed
MaizeGDB (Corn) Zm00025a035065 , Zm00025a000439
Brachypodium KQK23814 , KQJ92900 , KQJ92899
Barley HORVU4Hr1G082040.8 , HORVU4Hr1G082040.9 , HORVU4Hr1G082040.1 , HORVU4Hr1G082040.2 , HORVU4Hr1G082040.3 , HORVU4Hr1G082040.4 , HORVU4Hr1G082040.5 , HORVU4Hr1G082040.6 , HORVU4Hr1G082040.7 , HORVU6Hr1G008730.1 , HORVU6Hr1G008640.18 , HORVU6Hr1G008640.19 , HORVU6Hr1G008640.14 , HORVU6Hr1G008640.15 , HORVU6Hr1G008640.16 , HORVU6Hr1G008640.17 , HORVU6Hr1G008640.10 , HORVU6Hr1G008640.11 , HORVU6Hr1G008640.12 , HORVU6Hr1G008640.13 , HORVU6Hr1G008640.21 , HORVU6Hr1G008640.20 , HORVU6Hr1G008640.22 , HORVU6Hr1G008640.6 , HORVU6Hr1G008640.7 , HORVU6Hr1G008640.4 , HORVU6Hr1G008640.5 , HORVU6Hr1G008640.2 , HORVU6Hr1G008640.3 , HORVU6Hr1G008640.1 , HORVU6Hr1G008640.8 , HORVU6Hr1G008640.9
Wheat TraesCS5A02G498000 , TraesCS6B02G056800 , TraesCS6B02G056800 , TraesCS4B02G325800 , TraesCS6A02G041700 , TraesCS6A02G041700 , TraesCS6D02G048300 , TraesCS6D02G048300 , TraesCS6D02G048300 , TraesCS4D02G322700 , TraesCS4D02G322700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G258300 integral membrane protein, putative, expressed -
2 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
3 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.010G270900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
6 Sobic.003G222600 similar to DEAD-box ATP-dependent RNA helicase 25(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
7 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
8 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
9 Sobic.002G074300 - -
10 Sobic.010G248600 - -
11 Sobic.003G178700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
12 Sobic.002G331000 OsFBX462 - F-box domain containing protein, expressed -
13 Sobic.003G107300 light-induced protein 1-like, putative, expressed -
14 Sobic.008G177850 - -
15 Sobic.008G101500 powdery mildew resistance protein PM3b, putative, expressed -
16 Sobic.009G085400 acyl-activating enzyme 14, putative, expressed -
17 Sobic.003G089600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.008G015300 amino acid permease family protein, putative, expressed -
19 Sobic.010G270300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@rhodanese-like domain containing protein, putative, expressed -
20 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31


Gene co-expression network
sample Sobic004G011566 Sobic004G011566 Sobic010G258300 Sobic010G258300 Sobic004G011566--Sobic010G258300 Sobic009G154600 Sobic009G154600 Sobic004G011566--Sobic009G154600 Sobic003G222300 Sobic003G222300 Sobic004G011566--Sobic003G222300 Sobic010G270900 Sobic010G270900 Sobic004G011566--Sobic010G270900 Sobic001G191200 Sobic001G191200 Sobic004G011566--Sobic001G191200 Sobic003G222600 Sobic003G222600 Sobic004G011566--Sobic003G222600 Sobic004G070200 Sobic004G070200 Sobic004G011566--Sobic004G070200 Sobic001G031300 Sobic001G031300 Sobic004G011566--Sobic001G031300 Sobic002G074300 Sobic002G074300 Sobic004G011566--Sobic002G074300 Sobic010G258300--Sobic003G222300 Sobic007G110200 Sobic007G110200 Sobic010G258300--Sobic007G110200 Sobic010G258300--Sobic001G031300 Sobic010G258300--Sobic003G222600 Sobic007G205600 Sobic007G205600 Sobic010G258300--Sobic007G205600 Sobic010G258300--Sobic009G154600 Sobic003G170200 Sobic003G170200 Sobic010G258300--Sobic003G170200 Sobic010G258300--Sobic004G011566 Sobic003G030400 Sobic003G030400 Sobic010G258300--Sobic003G030400 Sobic009G154600--Sobic001G191200 Sobic003G107300 Sobic003G107300 Sobic009G154600--Sobic003G107300 Sobic001G423100 Sobic001G423100 Sobic009G154600--Sobic001G423100 Sobic008G148400 Sobic008G148400 Sobic009G154600--Sobic008G148400 Sobic009G154600--Sobic010G258300 Sobic003G406700 Sobic003G406700 Sobic009G154600--Sobic003G406700 Sobic009G154600--Sobic003G222300 Sobic009G154600--Sobic001G031300 Sobic009G213400 Sobic009G213400 Sobic009G154600--Sobic009G213400 Sobic003G222300--Sobic010G258300 Sobic010G245100 Sobic010G245100 Sobic003G222300--Sobic010G245100 Sobic010G052500 Sobic010G052500 Sobic003G222300--Sobic010G052500 Sobic003G222300--Sobic009G213400 Sobic001G093600 Sobic001G093600 Sobic003G222300--Sobic001G093600 Sobic008G177850 Sobic008G177850 Sobic003G222300--Sobic008G177850 Sobic003G222300--Sobic009G154600 Sobic003G222300--Sobic001G031300 Sobic003G222300--Sobic003G107300 Sobic006G241200 Sobic006G241200 Sobic010G270900--Sobic006G241200 Sobic010G270900--Sobic002G074300 Sobic008G013900 Sobic008G013900 Sobic010G270900--Sobic008G013900 Sobic010G143400 Sobic010G143400 Sobic010G270900--Sobic010G143400 Sobic008G015300 Sobic008G015300 Sobic010G270900--Sobic008G015300 Sobic001G164200 Sobic001G164200 Sobic010G270900--Sobic001G164200 Sobic009G197000 Sobic009G197000 Sobic010G270900--Sobic009G197000 Sobic010G270900--Sobic004G011566 Sobic005G085200 Sobic005G085200 Sobic010G270900--Sobic005G085200 Sobic001G191200--Sobic003G406700 Sobic001G078200 Sobic001G078200 Sobic001G191200--Sobic001G078200 Sobic001G191200--Sobic009G154600 Sobic001G377000 Sobic001G377000 Sobic001G191200--Sobic001G377000 Sobic001G191200--Sobic009G213400 Sobic001G191200--Sobic005G085200 Sobic001G191200--Sobic003G107300 Sobic001G191200--Sobic001G423100 Sobic001G225500 Sobic001G225500 Sobic001G191200--Sobic001G225500 Sobic003G222600--Sobic003G030400 Sobic003G222600--Sobic008G148400 Sobic001G114400 Sobic001G114400 Sobic003G222600--Sobic001G114400 Sobic003G222600--Sobic010G258300 Sobic003G222600--Sobic004G070200 Sobic009G137000 Sobic009G137000 Sobic003G222600--Sobic009G137000 Sobic003G222600--Sobic007G205600 Sobic009G233800 Sobic009G233800 Sobic003G222600--Sobic009G233800 Sobic009G036300 Sobic009G036300 Sobic003G222600--Sobic009G036300 Sobic004G070200--Sobic003G222600 Sobic004G070200--Sobic003G030400 Sobic007G131200 Sobic007G131200 Sobic004G070200--Sobic007G131200 Sobic002G172600 Sobic002G172600 Sobic004G070200--Sobic002G172600 Sobic006G110200 Sobic006G110200 Sobic004G070200--Sobic006G110200 Sobic004G070200--Sobic009G137000 Sobic004G070200--Sobic001G114400 Sobic002G191100 Sobic002G191100 Sobic004G070200--Sobic002G191100 Sobic001G246200 Sobic001G246200 Sobic004G070200--Sobic001G246200 Sobic001G031300--Sobic010G258300 Sobic007G076700 Sobic007G076700 Sobic001G031300--Sobic007G076700 Sobic001G031300--Sobic007G205600 Sobic004G035000 Sobic004G035000 Sobic001G031300--Sobic004G035000 Sobic001G031300--Sobic009G154600 Sobic001G031300--Sobic003G222300 Sobic001G031300--Sobic001G377000 Sobic001G031300--Sobic001G191200 Sobic001G031300--Sobic007G110200 Sobic002G074300--Sobic010G270900 Sobic002G074300--Sobic008G015300 Sobic003G178700 Sobic003G178700 Sobic002G074300--Sobic003G178700 Sobic002G074300--Sobic006G241200 Sobic002G074300--Sobic005G085200 Sobic008G101500 Sobic008G101500 Sobic002G074300--Sobic008G101500 Sobic002G074300--Sobic004G011566 Sobic009G064766 Sobic009G064766 Sobic002G074300--Sobic009G064766 Sobic002G074300--Sobic008G013900
Octagon: transcription factors


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